RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
LINC01006-203ENST00000425712 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
LINC01006-203ENST00000425712 TNIKQ9UKE5 1360 aa15.35■□□□□ 0.05
LINC01006-203ENST00000425712 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
LINC01006-203ENST00000425712 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
LINC01006-203ENST00000425712 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
LINC01006-203ENST00000425712 UGGT2Q9NYU1 1516 aa15.28■□□□□ 0.04
LINC01006-203ENST00000425712 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
LINC01006-203ENST00000425712 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
LINC01006-203ENST00000425712 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
LINC01006-203ENST00000425712 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
LINC01006-203ENST00000425712 CLIP1P30622 1438 aa15.22■□□□□ 0.03
LINC01006-203ENST00000425712 KIAA0556O60303 1618 aa15.21■□□□□ 0.03
LINC01006-203ENST00000425712 CARMIL2Q6F5E8 1435 aa15.21■□□□□ 0.03
LINC01006-203ENST00000425712 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
LINC01006-203ENST00000425712 PRG4Q92954 1404 aaPredicted RBP15.18■□□□□ 0.02
LINC01006-203ENST00000425712 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
LINC01006-203ENST00000425712 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
LINC01006-203ENST00000425712 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
LINC01006-203ENST00000425712 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
LINC01006-203ENST00000425712 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
LINC01006-203ENST00000425712 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
LINC01006-203ENST00000425712 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
LINC01006-203ENST00000425712 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
LINC01006-203ENST00000425712 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
LINC01006-203ENST00000425712 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
LINC01006-203ENST00000425712 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
LINC01006-203ENST00000425712 P3H3Q8IVL6 736 aa15.05■□□□□ -0
LINC01006-203ENST00000425712 PTPRGP23470 1445 aa15.05■□□□□ -0
LINC01006-203ENST00000425712 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
LINC01006-203ENST00000425712 HECW1Q76N89 1606 aa15.01□□□□□ -0.01
LINC01006-203ENST00000425712 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
LINC01006-203ENST00000425712 PCF11O94913 1555 aaKnown RBP15.01□□□□□ -0.01
LINC01006-203ENST00000425712 FYCO1Q9BQS8 1478 aa15.01□□□□□ -0.01
LINC01006-203ENST00000425712 ABCA8O94911 1581 aa15□□□□□ -0.01
LINC01006-203ENST00000425712 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
LINC01006-203ENST00000425712 CASKIN1Q8WXD9 1431 aa14.99□□□□□ -0.01
LINC01006-203ENST00000425712 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
LINC01006-203ENST00000425712 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
LINC01006-203ENST00000425712 UHRF1BP1LA0JNW5 1464 aa14.97□□□□□ -0.01
LINC01006-203ENST00000425712 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
LINC01006-203ENST00000425712 PLB1Q6P1J6 1458 aa14.96□□□□□ -0.01
LINC01006-203ENST00000425712 CCDC18Q5T9S5 1454 aa14.94□□□□□ -0.02
LINC01006-203ENST00000425712 NUP153P49790 1475 aaKnown RBP14.93□□□□□ -0.02
LINC01006-203ENST00000425712 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
LINC01006-203ENST00000425712 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
LINC01006-203ENST00000425712 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
LINC01006-203ENST00000425712 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
LINC01006-203ENST00000425712 KDM5BQ9UGL1 1544 aa14.88□□□□□ -0.03
LINC01006-203ENST00000425712 LRRIQ1Q96JM4 1722 aa14.87□□□□□ -0.03
LINC01006-203ENST00000425712 TIAM1Q13009 1591 aa14.86□□□□□ -0.03
LINC01006-203ENST00000425712 ZCCHC11Q5TAX3 1644 aaKnown RBP14.86□□□□□ -0.03
LINC01006-203ENST00000425712 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
LINC01006-203ENST00000425712 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
LINC01006-203ENST00000425712 APLP2Q06481 763 aa14.85□□□□□ -0.03
LINC01006-203ENST00000425712 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
LINC01006-203ENST00000425712 ATP10BO94823 1461 aa14.83□□□□□ -0.03
LINC01006-203ENST00000425712 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
LINC01006-203ENST00000425712 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINC01006-203ENST00000425712 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
LINC01006-203ENST00000425712 MAPKBP1O60336 1514 aa14.8□□□□□ -0.04
LINC01006-203ENST00000425712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
LINC01006-203ENST00000425712 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
LINC01006-203ENST00000425712 LRRC9Q6ZRR7 1453 aa14.77□□□□□ -0.04
LINC01006-203ENST00000425712 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.04
LINC01006-203ENST00000425712 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
LINC01006-203ENST00000425712 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
LINC01006-203ENST00000425712 TROQ12816 1431 aaPredicted RBP14.76□□□□□ -0.05
LINC01006-203ENST00000425712 MAGI3Q5TCQ9 1506 aa14.75□□□□□ -0.05
LINC01006-203ENST00000425712 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
LINC01006-203ENST00000425712 KIF14Q15058 1648 aa14.74□□□□□ -0.05
LINC01006-203ENST00000425712 PLEKHD1A6NEE1 506 aa14.74□□□□□ -0.05
LINC01006-203ENST00000425712 SUPT6HQ7KZ85 1726 aaKnown RBP14.73□□□□□ -0.05
LINC01006-203ENST00000425712 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
LINC01006-203ENST00000425712 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
LINC01006-203ENST00000425712 DIP2BQ9P265 1576 aa14.66□□□□□ -0.06
LINC01006-203ENST00000425712 ABCA9Q8IUA7 1624 aa14.66□□□□□ -0.06
LINC01006-203ENST00000425712 GLI2P10070 1586 aa14.65□□□□□ -0.06
LINC01006-203ENST00000425712 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
LINC01006-203ENST00000425712 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
LINC01006-203ENST00000425712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.64□□□□□ -0.07
LINC01006-203ENST00000425712 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
LINC01006-203ENST00000425712 MYO5CQ9NQX4 1742 aa14.62□□□□□ -0.07
LINC01006-203ENST00000425712 PREX2Q70Z35 1606 aa14.61□□□□□ -0.07
LINC01006-203ENST00000425712 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
LINC01006-203ENST00000425712 CCNB3Q8WWL7 1395 aa14.6□□□□□ -0.07
LINC01006-203ENST00000425712 KCNH8Q96L42 1107 aa14.6□□□□□ -0.07
LINC01006-203ENST00000425712 MAP3K4Q9Y6R4 1608 aa14.59□□□□□ -0.07
LINC01006-203ENST00000425712 MYOM3Q5VTT5 1437 aa14.59□□□□□ -0.07
LINC01006-203ENST00000425712 CDC42BPAQ5VT25 1732 aa14.59□□□□□ -0.07
LINC01006-203ENST00000425712 KIF13AQ9H1H9 1805 aa14.58□□□□□ -0.08
LINC01006-203ENST00000425712 PPARGC1BQ86YN6 1023 aaKnown RBP14.58□□□□□ -0.08
LINC01006-203ENST00000425712 PHLDB1Q86UU1 1377 aa14.58□□□□□ -0.08
LINC01006-203ENST00000425712 GPATCH8Q9UKJ3 1502 aaKnown RBP14.57□□□□□ -0.08
LINC01006-203ENST00000425712 MIA2Q96PC5 1412 aa14.57□□□□□ -0.08
LINC01006-203ENST00000425712 CFAP74Q9C0B2 1584 aa14.56□□□□□ -0.08
LINC01006-203ENST00000425712 PLCH2O75038 1416 aa14.55□□□□□ -0.08
LINC01006-203ENST00000425712 CD109Q6YHK3 1445 aa14.55□□□□□ -0.08
LINC01006-203ENST00000425712 FGD6Q6ZV73 1430 aa14.55□□□□□ -0.08
LINC01006-203ENST00000425712 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms