RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
SHANK2-207ENST00000425049 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
SHANK2-207ENST00000425049 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
SHANK2-207ENST00000425049 KIAA0586Q9BVV6 1533 aa28.34■■■□□ 2.13
SHANK2-207ENST00000425049 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
SHANK2-207ENST00000425049 IQGAP2Q13576 1575 aa28.14■■■□□ 2.1
SHANK2-207ENST00000425049 CARMIL2Q6F5E8 1435 aa28.12■■■□□ 2.09
SHANK2-207ENST00000425049 NPM1P06748 294 aaKnown RBP eCLIP28.1■■■□□ 2.09
SHANK2-207ENST00000425049 PTPRGP23470 1445 aa28.04■■■□□ 2.08
SHANK2-207ENST00000425049 TNIKQ9UKE5 1360 aa28.02■■■□□ 2.08
SHANK2-207ENST00000425049 TTBK1Q5TCY1 1321 aaPredicted RBP28.02■■■□□ 2.08
SHANK2-207ENST00000425049 ADCY10Q96PN6 1610 aa28.02■■■□□ 2.08
SHANK2-207ENST00000425049 MAPKBP1O60336 1514 aa27.95■■■□□ 2.06
SHANK2-207ENST00000425049 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
SHANK2-207ENST00000425049 DISP1Q96F81 1524 aa27.92■■■□□ 2.06
SHANK2-207ENST00000425049 PRXQ9BXM0 1461 aa27.92■■■□□ 2.06
SHANK2-207ENST00000425049 CTTNBP2Q8WZ74 1663 aa27.9■■■□□ 2.06
SHANK2-207ENST00000425049 ABCC10Q5T3U5 1492 aa27.88■■■□□ 2.05
SHANK2-207ENST00000425049 FAM69CQ0P6D2 419 aa27.87■■■□□ 2.05
SHANK2-207ENST00000425049 KIF13AQ9H1H9 1805 aa27.87■■■□□ 2.05
SHANK2-207ENST00000425049 KIAA0556O60303 1618 aa27.86■■■□□ 2.05
SHANK2-207ENST00000425049 ABCC2Q92887 1545 aa27.84■■■□□ 2.05
SHANK2-207ENST00000425049 UACAQ9BZF9 1416 aa27.83■■■□□ 2.05
SHANK2-207ENST00000425049 GOLGA3Q08378 1498 aa27.83■■■□□ 2.04
SHANK2-207ENST00000425049 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
SHANK2-207ENST00000425049 EEA1Q15075 1411 aa27.82■■■□□ 2.04
SHANK2-207ENST00000425049 UHRF1BP1LA0JNW5 1464 aa27.81■■■□□ 2.04
SHANK2-207ENST00000425049 DIP2BQ9P265 1576 aa27.81■■■□□ 2.04
SHANK2-207ENST00000425049 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
SHANK2-207ENST00000425049 ASXL2Q76L83 1435 aa27.7■■■□□ 2.03
SHANK2-207ENST00000425049 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
SHANK2-207ENST00000425049 KDM5BQ9UGL1 1544 aa27.67■■■□□ 2.02
SHANK2-207ENST00000425049 ZCCHC11Q5TAX3 1644 aaKnown RBP27.62■■■□□ 2.01
SHANK2-207ENST00000425049 TSPOAP1O95153 1857 aa27.58■■■□□ 2.01
SHANK2-207ENST00000425049 ABCA8O94911 1581 aa27.56■■■□□ 2
SHANK2-207ENST00000425049 GLI2P10070 1586 aa27.56■■■□□ 2
SHANK2-207ENST00000425049 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
SHANK2-207ENST00000425049 P3H3Q8IVL6 736 aa27.55■■■□□ 2
SHANK2-207ENST00000425049 EPRSP07814 1512 aaKnown RBP27.53■■■□□ 2
SHANK2-207ENST00000425049 KDM6BO15054 1643 aa27.52■■■□□ 2
SHANK2-207ENST00000425049 KIF21BO75037 1637 aa27.52■■■□□ 2
SHANK2-207ENST00000425049 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
SHANK2-207ENST00000425049 SAMD9Q5K651 1589 aa27.51■■□□□ 1.99
SHANK2-207ENST00000425049 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
SHANK2-207ENST00000425049 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
SHANK2-207ENST00000425049 MAP3K4Q9Y6R4 1608 aa27.41■■□□□ 1.98
SHANK2-207ENST00000425049 TEX14Q8IWB6 1497 aa27.41■■□□□ 1.98
SHANK2-207ENST00000425049 ARID3CA6NKF2 412 aa27.4■■□□□ 1.98
SHANK2-207ENST00000425049 PPRC1Q5VV67 1664 aaKnown RBP27.4■■□□□ 1.98
SHANK2-207ENST00000425049 FHOD3Q2V2M9 1422 aa27.37■■□□□ 1.97
SHANK2-207ENST00000425049 KCNH8Q96L42 1107 aa27.37■■□□□ 1.97
SHANK2-207ENST00000425049 RAPGEF6Q8TEU7 1601 aa27.37■■□□□ 1.97
SHANK2-207ENST00000425049 EFCAB5A4FU69 1503 aa27.36■■□□□ 1.97
SHANK2-207ENST00000425049 UBTFP17480 764 aaKnown RBP27.36■■□□□ 1.97
SHANK2-207ENST00000425049 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
SHANK2-207ENST00000425049 ATP10BO94823 1461 aa27.33■■□□□ 1.97
SHANK2-207ENST00000425049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
SHANK2-207ENST00000425049 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
SHANK2-207ENST00000425049 CD109Q6YHK3 1445 aa27.3■■□□□ 1.96
SHANK2-207ENST00000425049 CFAP43Q8NDM7 1665 aa27.29■■□□□ 1.96
SHANK2-207ENST00000425049 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
SHANK2-207ENST00000425049 MAGI3Q5TCQ9 1506 aa27.24■■□□□ 1.95
SHANK2-207ENST00000425049 COL17A1Q9UMD9 1497 aaPredicted RBP27.18■■□□□ 1.94
SHANK2-207ENST00000425049 ABCA9Q8IUA7 1624 aa27.14■■□□□ 1.94
SHANK2-207ENST00000425049 FMN1Q68DA7 1419 aa27.13■■□□□ 1.93
SHANK2-207ENST00000425049 PLEKHD1A6NEE1 506 aa27.12■■□□□ 1.93
SHANK2-207ENST00000425049 ARHGAP35Q9NRY4 1499 aa27.11■■□□□ 1.93
SHANK2-207ENST00000425049 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
SHANK2-207ENST00000425049 HECW1Q76N89 1606 aa27.05■■□□□ 1.92
SHANK2-207ENST00000425049 PHLDB1Q86UU1 1377 aa27.04■■□□□ 1.92
SHANK2-207ENST00000425049 CDK13Q14004 1512 aaKnown RBP27.02■■□□□ 1.92
SHANK2-207ENST00000425049 KDM4FA0A1W2PPD8 638 aa27.02■■□□□ 1.92
SHANK2-207ENST00000425049 ARAP3Q8WWN8 1544 aa27.01■■□□□ 1.91
SHANK2-207ENST00000425049 NEO1Q92859 1461 aa27■■□□□ 1.91
SHANK2-207ENST00000425049 ADGRL1O94910 1474 aa26.96■■□□□ 1.91
SHANK2-207ENST00000425049 CDK11AQ9UQ88 783 aaPredicted RBP26.95■■□□□ 1.9
SHANK2-207ENST00000425049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.93■■□□□ 1.9
SHANK2-207ENST00000425049 TTC37Q6PGP7 1564 aa26.9■■□□□ 1.9
SHANK2-207ENST00000425049 CFAP74Q9C0B2 1584 aa26.9■■□□□ 1.9
SHANK2-207ENST00000425049 FANCAO15360 1455 aa26.88■■□□□ 1.89
SHANK2-207ENST00000425049 RAPGEF3O95398 923 aa26.86■■□□□ 1.89
SHANK2-207ENST00000425049 CLIP1P30622 1438 aa26.86■■□□□ 1.89
SHANK2-207ENST00000425049 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
SHANK2-207ENST00000425049 AKNAQ7Z591 1439 aa26.83■■□□□ 1.89
SHANK2-207ENST00000425049 CASKIN1Q8WXD9 1431 aa26.83■■□□□ 1.89
SHANK2-207ENST00000425049 DENND4BO75064 1496 aaPredicted RBP26.82■■□□□ 1.88
SHANK2-207ENST00000425049 KIF14Q15058 1648 aa26.82■■□□□ 1.88
SHANK2-207ENST00000425049 TROQ12816 1431 aaPredicted RBP26.82■■□□□ 1.88
SHANK2-207ENST00000425049 CCDC18Q5T9S5 1454 aa26.81■■□□□ 1.88
SHANK2-207ENST00000425049 FRMPD1Q5SYB0 1578 aa26.79■■□□□ 1.88
SHANK2-207ENST00000425049 PLCH2O75038 1416 aa26.78■■□□□ 1.88
SHANK2-207ENST00000425049 FYCO1Q9BQS8 1478 aa26.77■■□□□ 1.88
SHANK2-207ENST00000425049 LRRIQ1Q96JM4 1722 aa26.74■■□□□ 1.87
SHANK2-207ENST00000425049 MYO5CQ9NQX4 1742 aa26.74■■□□□ 1.87
SHANK2-207ENST00000425049 EFCAB2Q5VUJ9 269 aa26.72■■□□□ 1.87
SHANK2-207ENST00000425049 RICTORQ6R327 1708 aa26.71■■□□□ 1.87
SHANK2-207ENST00000425049 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.86
SHANK2-207ENST00000425049 ARHGAP5Q13017 1502 aa26.69■■□□□ 1.86
SHANK2-207ENST00000425049 SCAPERQ9BY12 1400 aa26.68■■□□□ 1.86
SHANK2-207ENST00000425049 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms