RNA–Protein interactions for RNA: ENST00000425031.1

LINC00278-201, long intergenic non-protein coding RNA 278, humanhuman

TSL 2 BASIC

Gene LINC00278, Length 528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-201ENST00000425031 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
LINC00278-201ENST00000425031 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.42
LINC00278-201ENST00000425031 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
LINC00278-201ENST00000425031 IQGAP2Q13576 1575 aa23.88■■□□□ 1.41
LINC00278-201ENST00000425031 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
LINC00278-201ENST00000425031 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
LINC00278-201ENST00000425031 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
LINC00278-201ENST00000425031 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
LINC00278-201ENST00000425031 SAMD9Q5K651 1589 aa23.71■■□□□ 1.39
LINC00278-201ENST00000425031 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
LINC00278-201ENST00000425031 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
LINC00278-201ENST00000425031 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
LINC00278-201ENST00000425031 DISP1Q96F81 1524 aa23.66■■□□□ 1.38
LINC00278-201ENST00000425031 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
LINC00278-201ENST00000425031 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.38
LINC00278-201ENST00000425031 CLIP1P30622 1438 aa23.64■■□□□ 1.37
LINC00278-201ENST00000425031 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
LINC00278-201ENST00000425031 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
LINC00278-201ENST00000425031 RANGAP1P46060 587 aaPredicted RBP23.61■■□□□ 1.37
LINC00278-201ENST00000425031 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
LINC00278-201ENST00000425031 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
LINC00278-201ENST00000425031 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
LINC00278-201ENST00000425031 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
LINC00278-201ENST00000425031 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
LINC00278-201ENST00000425031 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
LINC00278-201ENST00000425031 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
LINC00278-201ENST00000425031 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
LINC00278-201ENST00000425031 PTPRGP23470 1445 aa23.41■■□□□ 1.34
LINC00278-201ENST00000425031 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
LINC00278-201ENST00000425031 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
LINC00278-201ENST00000425031 ABCA8O94911 1581 aa23.36■■□□□ 1.33
LINC00278-201ENST00000425031 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
LINC00278-201ENST00000425031 PCF11O94913 1555 aaKnown RBP23.35■■□□□ 1.33
LINC00278-201ENST00000425031 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
LINC00278-201ENST00000425031 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.32
LINC00278-201ENST00000425031 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
LINC00278-201ENST00000425031 CASKIN1Q8WXD9 1431 aa23.3■■□□□ 1.32
LINC00278-201ENST00000425031 LRRIQ1Q96JM4 1722 aa23.3■■□□□ 1.32
LINC00278-201ENST00000425031 FYCO1Q9BQS8 1478 aa23.29■■□□□ 1.32
LINC00278-201ENST00000425031 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
LINC00278-201ENST00000425031 HECW1Q76N89 1606 aa23.28■■□□□ 1.32
LINC00278-201ENST00000425031 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
LINC00278-201ENST00000425031 UHRF1BP1LA0JNW5 1464 aa23.27■■□□□ 1.32
LINC00278-201ENST00000425031 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
LINC00278-201ENST00000425031 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
LINC00278-201ENST00000425031 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
LINC00278-201ENST00000425031 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
LINC00278-201ENST00000425031 EPRSP07814 1512 aaKnown RBP23.17■■□□□ 1.3
LINC00278-201ENST00000425031 KDM5BQ9UGL1 1544 aa23.16■■□□□ 1.3
LINC00278-201ENST00000425031 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
LINC00278-201ENST00000425031 CCDC18Q5T9S5 1454 aa23.15■■□□□ 1.3
LINC00278-201ENST00000425031 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
LINC00278-201ENST00000425031 ATP10BO94823 1461 aa23.13■■□□□ 1.29
LINC00278-201ENST00000425031 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
LINC00278-201ENST00000425031 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
LINC00278-201ENST00000425031 TIAM1Q13009 1591 aa23.12■■□□□ 1.29
LINC00278-201ENST00000425031 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
LINC00278-201ENST00000425031 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
LINC00278-201ENST00000425031 APLP2Q06481 763 aa23■■□□□ 1.27
LINC00278-201ENST00000425031 MAPKBP1O60336 1514 aa22.99■■□□□ 1.27
LINC00278-201ENST00000425031 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
LINC00278-201ENST00000425031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
LINC00278-201ENST00000425031 NPM1P06748 294 aaKnown RBP eCLIP22.98■■□□□ 1.27
LINC00278-201ENST00000425031 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
LINC00278-201ENST00000425031 EHBP1L1Q8N3D4 1523 aa22.98■■□□□ 1.27
LINC00278-201ENST00000425031 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
LINC00278-201ENST00000425031 TROQ12816 1431 aaPredicted RBP22.94■■□□□ 1.26
LINC00278-201ENST00000425031 ASXL2Q76L83 1435 aa22.94■■□□□ 1.26
LINC00278-201ENST00000425031 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
LINC00278-201ENST00000425031 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
LINC00278-201ENST00000425031 PLEKHD1A6NEE1 506 aa22.92■■□□□ 1.26
LINC00278-201ENST00000425031 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
LINC00278-201ENST00000425031 SUPT6HQ7KZ85 1726 aaKnown RBP22.91■■□□□ 1.26
LINC00278-201ENST00000425031 KIF14Q15058 1648 aa22.9■■□□□ 1.26
LINC00278-201ENST00000425031 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
LINC00278-201ENST00000425031 DIP2BQ9P265 1576 aa22.81■■□□□ 1.24
LINC00278-201ENST00000425031 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
LINC00278-201ENST00000425031 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
LINC00278-201ENST00000425031 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
LINC00278-201ENST00000425031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.81■■□□□ 1.24
LINC00278-201ENST00000425031 TTC37Q6PGP7 1564 aa22.8■■□□□ 1.24
LINC00278-201ENST00000425031 KIF13AQ9H1H9 1805 aa22.8■■□□□ 1.24
LINC00278-201ENST00000425031 GLI2P10070 1586 aa22.79■■□□□ 1.24
LINC00278-201ENST00000425031 CDC42BPAQ5VT25 1732 aa22.78■■□□□ 1.24
LINC00278-201ENST00000425031 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
LINC00278-201ENST00000425031 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
LINC00278-201ENST00000425031 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
LINC00278-201ENST00000425031 MAP3K4Q9Y6R4 1608 aa22.73■■□□□ 1.23
LINC00278-201ENST00000425031 CDC42BPBQ9Y5S2 1711 aa22.73■■□□□ 1.23
LINC00278-201ENST00000425031 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
LINC00278-201ENST00000425031 PHLDB1Q86UU1 1377 aa22.71■■□□□ 1.23
LINC00278-201ENST00000425031 GPATCH8Q9UKJ3 1502 aaKnown RBP22.7■■□□□ 1.22
LINC00278-201ENST00000425031 MYOM3Q5VTT5 1437 aa22.68■■□□□ 1.22
LINC00278-201ENST00000425031 CCNB3Q8WWL7 1395 aa22.68■■□□□ 1.22
LINC00278-201ENST00000425031 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
LINC00278-201ENST00000425031 PLCH2O75038 1416 aa22.65■■□□□ 1.22
LINC00278-201ENST00000425031 FAM69CQ0P6D2 419 aa22.64■■□□□ 1.21
LINC00278-201ENST00000425031 PPRC1Q5VV67 1664 aaKnown RBP22.64■■□□□ 1.21
LINC00278-201ENST00000425031 TSPOAP1O95153 1857 aa22.63■■□□□ 1.21
LINC00278-201ENST00000425031 CD109Q6YHK3 1445 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms