RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 CHD1O14646 1710 aa16.92■□□□□ 0.3
NCSTN-204ENST00000424645 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
NCSTN-204ENST00000424645 NUP160Q12769 1436 aa16.87■□□□□ 0.29
NCSTN-204ENST00000424645 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
NCSTN-204ENST00000424645 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
NCSTN-204ENST00000424645 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
NCSTN-204ENST00000424645 KIAA0586Q9BVV6 1533 aa16.79■□□□□ 0.28
NCSTN-204ENST00000424645 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-204ENST00000424645 KIF21BO75037 1637 aa16.74■□□□□ 0.27
NCSTN-204ENST00000424645 JPH4Q96JJ6 628 aa16.73■□□□□ 0.27
NCSTN-204ENST00000424645 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
NCSTN-204ENST00000424645 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
NCSTN-204ENST00000424645 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
NCSTN-204ENST00000424645 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
NCSTN-204ENST00000424645 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
NCSTN-204ENST00000424645 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
NCSTN-204ENST00000424645 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
NCSTN-204ENST00000424645 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
NCSTN-204ENST00000424645 RIMBP3CA6NJZ7 1639 aa16.61■□□□□ 0.25
NCSTN-204ENST00000424645 RIMBP3BA6NNM3 1639 aa16.61■□□□□ 0.25
NCSTN-204ENST00000424645 RIMBP3Q9UFD9 1639 aa16.61■□□□□ 0.25
NCSTN-204ENST00000424645 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
NCSTN-204ENST00000424645 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
NCSTN-204ENST00000424645 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
NCSTN-204ENST00000424645 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
NCSTN-204ENST00000424645 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
NCSTN-204ENST00000424645 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
NCSTN-204ENST00000424645 PTPRGP23470 1445 aa16.5■□□□□ 0.23
NCSTN-204ENST00000424645 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
NCSTN-204ENST00000424645 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
NCSTN-204ENST00000424645 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
NCSTN-204ENST00000424645 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
NCSTN-204ENST00000424645 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
NCSTN-204ENST00000424645 UACAQ9BZF9 1416 aa16.39■□□□□ 0.21
NCSTN-204ENST00000424645 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCSTN-204ENST00000424645 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
NCSTN-204ENST00000424645 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
NCSTN-204ENST00000424645 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
NCSTN-204ENST00000424645 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
NCSTN-204ENST00000424645 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
NCSTN-204ENST00000424645 CLIP1P30622 1438 aa16.36■□□□□ 0.21
NCSTN-204ENST00000424645 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
NCSTN-204ENST00000424645 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
NCSTN-204ENST00000424645 FHOD3Q2V2M9 1422 aa16.33■□□□□ 0.2
NCSTN-204ENST00000424645 ABCA8O94911 1581 aa16.32■□□□□ 0.2
NCSTN-204ENST00000424645 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
NCSTN-204ENST00000424645 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-204ENST00000424645 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
NCSTN-204ENST00000424645 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
NCSTN-204ENST00000424645 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
NCSTN-204ENST00000424645 RAPGEF6Q8TEU7 1601 aa16.26■□□□□ 0.19
NCSTN-204ENST00000424645 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
NCSTN-204ENST00000424645 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
NCSTN-204ENST00000424645 ATP10BO94823 1461 aa16.2■□□□□ 0.18
NCSTN-204ENST00000424645 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
NCSTN-204ENST00000424645 HECW1Q76N89 1606 aa16.19■□□□□ 0.18
NCSTN-204ENST00000424645 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
NCSTN-204ENST00000424645 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
NCSTN-204ENST00000424645 ZCCHC11Q5TAX3 1644 aaKnown RBP16.18■□□□□ 0.18
NCSTN-204ENST00000424645 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
NCSTN-204ENST00000424645 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
NCSTN-204ENST00000424645 PLEKHD1A6NEE1 506 aa16.15■□□□□ 0.18
NCSTN-204ENST00000424645 EPRSP07814 1512 aaKnown RBP16.14■□□□□ 0.18
NCSTN-204ENST00000424645 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
NCSTN-204ENST00000424645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-204ENST00000424645 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
NCSTN-204ENST00000424645 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-204ENST00000424645 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
NCSTN-204ENST00000424645 WDR7Q9Y4E6 1490 aa16.13■□□□□ 0.17
NCSTN-204ENST00000424645 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
NCSTN-204ENST00000424645 PCF11O94913 1555 aaKnown RBP16.11■□□□□ 0.17
NCSTN-204ENST00000424645 GLI2P10070 1586 aa16.09■□□□□ 0.17
NCSTN-204ENST00000424645 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
NCSTN-204ENST00000424645 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
NCSTN-204ENST00000424645 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
NCSTN-204ENST00000424645 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
NCSTN-204ENST00000424645 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
NCSTN-204ENST00000424645 TROQ12816 1431 aaPredicted RBP16.03■□□□□ 0.16
NCSTN-204ENST00000424645 APLP2Q06481 763 aa16.03■□□□□ 0.16
NCSTN-204ENST00000424645 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
NCSTN-204ENST00000424645 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
NCSTN-204ENST00000424645 LRRIQ1Q96JM4 1722 aa15.99■□□□□ 0.15
NCSTN-204ENST00000424645 CFAP43Q8NDM7 1665 aa15.98■□□□□ 0.15
NCSTN-204ENST00000424645 MTUS2Q5JR59 1369 aa15.98■□□□□ 0.15
NCSTN-204ENST00000424645 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
NCSTN-204ENST00000424645 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
NCSTN-204ENST00000424645 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
NCSTN-204ENST00000424645 TEX14Q8IWB6 1497 aa15.97■□□□□ 0.15
NCSTN-204ENST00000424645 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
NCSTN-204ENST00000424645 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
NCSTN-204ENST00000424645 TIAM1Q13009 1591 aa15.96■□□□□ 0.14
NCSTN-204ENST00000424645 KIF14Q15058 1648 aa15.95■□□□□ 0.14
NCSTN-204ENST00000424645 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
NCSTN-204ENST00000424645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.93■□□□□ 0.14
NCSTN-204ENST00000424645 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
NCSTN-204ENST00000424645 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
NCSTN-204ENST00000424645 PLCH2O75038 1416 aa15.9■□□□□ 0.14
NCSTN-204ENST00000424645 NEO1Q92859 1461 aa15.88■□□□□ 0.13
NCSTN-204ENST00000424645 EFCAB2Q5VUJ9 269 aa15.87■□□□□ 0.13
NCSTN-204ENST00000424645 TTC37Q6PGP7 1564 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms