RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 P3H3Q8IVL6 736 aa21.67■■□□□ 1.06
PRPF39-202ENST00000424478 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
PRPF39-202ENST00000424478 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
PRPF39-202ENST00000424478 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
PRPF39-202ENST00000424478 CEP162Q5TB80 1403 aa21.62■■□□□ 1.05
PRPF39-202ENST00000424478 NUP160Q12769 1436 aa21.6■■□□□ 1.05
PRPF39-202ENST00000424478 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
PRPF39-202ENST00000424478 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
PRPF39-202ENST00000424478 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
PRPF39-202ENST00000424478 CLIP1P30622 1438 aa21.55■■□□□ 1.04
PRPF39-202ENST00000424478 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
PRPF39-202ENST00000424478 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
PRPF39-202ENST00000424478 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
PRPF39-202ENST00000424478 ERCC6L2Q5T890 1561 aa21.47■■□□□ 1.03
PRPF39-202ENST00000424478 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
PRPF39-202ENST00000424478 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
PRPF39-202ENST00000424478 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
PRPF39-202ENST00000424478 DISP1Q96F81 1524 aa21.41■■□□□ 1.02
PRPF39-202ENST00000424478 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
PRPF39-202ENST00000424478 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
PRPF39-202ENST00000424478 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
PRPF39-202ENST00000424478 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
PRPF39-202ENST00000424478 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
PRPF39-202ENST00000424478 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
PRPF39-202ENST00000424478 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
PRPF39-202ENST00000424478 EFCAB5A4FU69 1503 aa21.31■■□□□ 1
PRPF39-202ENST00000424478 CARMIL2Q6F5E8 1435 aa21.29■■□□□ 1
PRPF39-202ENST00000424478 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
PRPF39-202ENST00000424478 PLB1Q6P1J6 1458 aa21.23■□□□□ 0.99
PRPF39-202ENST00000424478 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
PRPF39-202ENST00000424478 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
PRPF39-202ENST00000424478 PTPRGP23470 1445 aa21.21■□□□□ 0.99
PRPF39-202ENST00000424478 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
PRPF39-202ENST00000424478 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
PRPF39-202ENST00000424478 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
PRPF39-202ENST00000424478 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
PRPF39-202ENST00000424478 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
PRPF39-202ENST00000424478 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
PRPF39-202ENST00000424478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
PRPF39-202ENST00000424478 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
PRPF39-202ENST00000424478 CDK13Q14004 1512 aaKnown RBP21.09■□□□□ 0.97
PRPF39-202ENST00000424478 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
PRPF39-202ENST00000424478 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
PRPF39-202ENST00000424478 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.96
PRPF39-202ENST00000424478 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
PRPF39-202ENST00000424478 APLP2Q06481 763 aa21.06■□□□□ 0.96
PRPF39-202ENST00000424478 ABCA8O94911 1581 aa21.05■□□□□ 0.96
PRPF39-202ENST00000424478 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
PRPF39-202ENST00000424478 UACAQ9BZF9 1416 aa21.05■□□□□ 0.96
PRPF39-202ENST00000424478 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
PRPF39-202ENST00000424478 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
PRPF39-202ENST00000424478 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
PRPF39-202ENST00000424478 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
PRPF39-202ENST00000424478 ABCC2Q92887 1545 aa20.98■□□□□ 0.95
PRPF39-202ENST00000424478 ATP10BO94823 1461 aa20.97■□□□□ 0.95
PRPF39-202ENST00000424478 TIAM1Q13009 1591 aa20.96■□□□□ 0.95
PRPF39-202ENST00000424478 MAGI3Q5TCQ9 1506 aa20.95■□□□□ 0.94
PRPF39-202ENST00000424478 CFAP43Q8NDM7 1665 aa20.91■□□□□ 0.94
PRPF39-202ENST00000424478 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
PRPF39-202ENST00000424478 KCNH8Q96L42 1107 aa20.89■□□□□ 0.94
PRPF39-202ENST00000424478 MTUS2Q5JR59 1369 aa20.89■□□□□ 0.93
PRPF39-202ENST00000424478 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
PRPF39-202ENST00000424478 CCDC18Q5T9S5 1454 aa20.87■□□□□ 0.93
PRPF39-202ENST00000424478 UHRF1BP1LA0JNW5 1464 aa20.87■□□□□ 0.93
PRPF39-202ENST00000424478 KDM5BQ9UGL1 1544 aa20.85■□□□□ 0.93
PRPF39-202ENST00000424478 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
PRPF39-202ENST00000424478 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.93
PRPF39-202ENST00000424478 KIF14Q15058 1648 aa20.8■□□□□ 0.92
PRPF39-202ENST00000424478 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
PRPF39-202ENST00000424478 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
PRPF39-202ENST00000424478 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
PRPF39-202ENST00000424478 TROQ12816 1431 aaPredicted RBP20.76■□□□□ 0.91
PRPF39-202ENST00000424478 PHLDB1Q86UU1 1377 aa20.76■□□□□ 0.91
PRPF39-202ENST00000424478 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
PRPF39-202ENST00000424478 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
PRPF39-202ENST00000424478 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
PRPF39-202ENST00000424478 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
PRPF39-202ENST00000424478 TTC37Q6PGP7 1564 aa20.67■□□□□ 0.9
PRPF39-202ENST00000424478 ZNF777Q9ULD5 760 aaPredicted RBP20.66■□□□□ 0.9
PRPF39-202ENST00000424478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.65■□□□□ 0.9
PRPF39-202ENST00000424478 ITGAEP38570 1179 aa20.65■□□□□ 0.9
PRPF39-202ENST00000424478 ZNF644Q9H582 1327 aaPredicted RBP20.64■□□□□ 0.89
PRPF39-202ENST00000424478 PCGF6Q9BYE7 350 aa20.64■□□□□ 0.89
PRPF39-202ENST00000424478 CCNB3Q8WWL7 1395 aa20.63■□□□□ 0.89
PRPF39-202ENST00000424478 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
PRPF39-202ENST00000424478 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
PRPF39-202ENST00000424478 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
PRPF39-202ENST00000424478 MAPKBP1O60336 1514 aa20.6■□□□□ 0.89
PRPF39-202ENST00000424478 GPATCH8Q9UKJ3 1502 aaKnown RBP20.58■□□□□ 0.89
PRPF39-202ENST00000424478 CDC42BPAQ5VT25 1732 aa20.58■□□□□ 0.89
PRPF39-202ENST00000424478 MYOM3Q5VTT5 1437 aa20.58■□□□□ 0.89
PRPF39-202ENST00000424478 CFDP1Q9UEE9 299 aaPredicted RBP20.57■□□□□ 0.88
PRPF39-202ENST00000424478 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
PRPF39-202ENST00000424478 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
PRPF39-202ENST00000424478 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
PRPF39-202ENST00000424478 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
PRPF39-202ENST00000424478 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
PRPF39-202ENST00000424478 DIP2BQ9P265 1576 aa20.53■□□□□ 0.88
PRPF39-202ENST00000424478 ARHGAP5Q13017 1502 aa20.52■□□□□ 0.88
PRPF39-202ENST00000424478 MYO5CQ9NQX4 1742 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms