RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
CHD7-201ENST00000423902 AEBP2Q6ZN18 517 aaPredicted RBP11.64□□□□□ -0.55
CHD7-201ENST00000423902 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
CHD7-201ENST00000423902 KANK1Q14678 1352 aa11.62□□□□□ -0.55
CHD7-201ENST00000423902 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
CHD7-201ENST00000423902 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
CHD7-201ENST00000423902 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
CHD7-201ENST00000423902 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
CHD7-201ENST00000423902 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
CHD7-201ENST00000423902 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
CHD7-201ENST00000423902 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
CHD7-201ENST00000423902 TDRD9Q8NDG6 1382 aaKnown RBP11.57□□□□□ -0.56
CHD7-201ENST00000423902 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
CHD7-201ENST00000423902 YTHDC1Q96MU7 727 aaKnown RBP11.55□□□□□ -0.56
CHD7-201ENST00000423902 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
CHD7-201ENST00000423902 ANP32CO43423 234 aa11.53□□□□□ -0.56
CHD7-201ENST00000423902 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
CHD7-201ENST00000423902 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
CHD7-201ENST00000423902 CYB5RLQ6IPT4 315 aa11.53□□□□□ -0.56
CHD7-201ENST00000423902 FMN1Q68DA7 1419 aa11.52□□□□□ -0.57
CHD7-201ENST00000423902 MLECQ14165 292 aa11.51□□□□□ -0.57
CHD7-201ENST00000423902 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
CHD7-201ENST00000423902 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
CHD7-201ENST00000423902 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
CHD7-201ENST00000423902 A0A0G2JS52 829 aa11.49□□□□□ -0.57
CHD7-201ENST00000423902 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
CHD7-201ENST00000423902 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
CHD7-201ENST00000423902 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
CHD7-201ENST00000423902 EFCAB2Q5VUJ9 269 aa11.47□□□□□ -0.57
CHD7-201ENST00000423902 RAPGEF2Q9Y4G8 1499 aa11.46□□□□□ -0.58
CHD7-201ENST00000423902 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.58
CHD7-201ENST00000423902 CLSPNQ9HAW4 1339 aa11.46□□□□□ -0.58
CHD7-201ENST00000423902 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.58
CHD7-201ENST00000423902 TNIKQ9UKE5 1360 aa11.46□□□□□ -0.58
CHD7-201ENST00000423902 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
CHD7-201ENST00000423902 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
CHD7-201ENST00000423902 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
CHD7-201ENST00000423902 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
CHD7-201ENST00000423902 PTPRGP23470 1445 aa11.41□□□□□ -0.58
CHD7-201ENST00000423902 CCDC18Q5T9S5 1454 aa11.41□□□□□ -0.58
CHD7-201ENST00000423902 ZBTB7CA1YPR0 619 aa11.41□□□□□ -0.58
CHD7-201ENST00000423902 POGKQ9P215 609 aa11.4□□□□□ -0.58
CHD7-201ENST00000423902 HRCP23327 699 aa11.4□□□□□ -0.58
CHD7-201ENST00000423902 EID1Q9Y6B2 187 aa11.4□□□□□ -0.58
CHD7-201ENST00000423902 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
CHD7-201ENST00000423902 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
CHD7-201ENST00000423902 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
CHD7-201ENST00000423902 BICRAQ9NZM4 1560 aa11.38□□□□□ -0.59
CHD7-201ENST00000423902 GGT6Q6P531 493 aa11.38□□□□□ -0.59
CHD7-201ENST00000423902 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
CHD7-201ENST00000423902 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
CHD7-201ENST00000423902 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
CHD7-201ENST00000423902 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
CHD7-201ENST00000423902 MYT1Q01538 1121 aa11.35□□□□□ -0.59
CHD7-201ENST00000423902 TMC1Q8TDI8 760 aa11.35□□□□□ -0.59
CHD7-201ENST00000423902 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
CHD7-201ENST00000423902 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
CHD7-201ENST00000423902 SPAG9O60271 1321 aaKnown RBP11.33□□□□□ -0.6
CHD7-201ENST00000423902 NESP48681 1621 aa11.32□□□□□ -0.6
CHD7-201ENST00000423902 CFTRP13569 1480 aa11.32□□□□□ -0.6
CHD7-201ENST00000423902 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
CHD7-201ENST00000423902 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHD7-201ENST00000423902 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
CHD7-201ENST00000423902 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■■ 28
CHD7-201ENST00000423902 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
CHD7-201ENST00000423902 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
CHD7-201ENST00000423902 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
CHD7-201ENST00000423902 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
CHD7-201ENST00000423902 CUL7Q14999 1698 aa11.26□□□□□ -0.61
CHD7-201ENST00000423902 CFAP53Q96M91 514 aa11.26□□□□□ -0.61
CHD7-201ENST00000423902 NPHP1O15259 732 aa11.24□□□□□ -0.61
CHD7-201ENST00000423902 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
CHD7-201ENST00000423902 EIF4G2P78344 907 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD7-201ENST00000423902 KIF3BO15066 747 aa11.23□□□□□ -0.61
CHD7-201ENST00000423902 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
CHD7-201ENST00000423902 SYNJ2O15056 1496 aa11.22□□□□□ -0.61
CHD7-201ENST00000423902 TOP2BQ02880 1626 aa11.22□□□□□ -0.61
CHD7-201ENST00000423902 FHOD3Q2V2M9 1422 aa11.22□□□□□ -0.61
CHD7-201ENST00000423902 BCL11AQ9H165 835 aa11.21□□□□□ -0.61
CHD7-201ENST00000423902 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
CHD7-201ENST00000423902 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
CHD7-201ENST00000423902 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
CHD7-201ENST00000423902 PNNQ9H307 717 aaKnown RBP11.2□□□□□ -0.62
CHD7-201ENST00000423902 PRG4Q92954 1404 aaPredicted RBP11.2□□□□□ -0.62
CHD7-201ENST00000423902 CARD11Q9BXL7 1154 aa11.18□□□□□ -0.62
CHD7-201ENST00000423902 MAGI1Q96QZ7 1491 aaPredicted RBP11.18□□□□□ -0.62
CHD7-201ENST00000423902 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
CHD7-201ENST00000423902 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
CHD7-201ENST00000423902 DNAJC5BQ9UF47 199 aa11.18□□□□□ -0.62
CHD7-201ENST00000423902 CUX1P39880 1505 aa11.18□□□□□ -0.62
CHD7-201ENST00000423902 ARHGAP5Q13017 1502 aa11.17□□□□□ -0.62
CHD7-201ENST00000423902 ARXQ96QS3 562 aa11.17□□□□□ -0.62
CHD7-201ENST00000423902 HNRNPMP52272 730 aaKnown RBP eCLIP11.17□□□□□ -0.622e-10■■■■■ 35.5
CHD7-201ENST00000423902 POGZQ7Z3K3 1410 aa11.17□□□□□ -0.62
CHD7-201ENST00000423902 UACAQ9BZF9 1416 aa11.16□□□□□ -0.62
CHD7-201ENST00000423902 NUDCQ9Y266 331 aa11.16□□□□□ -0.62
CHD7-201ENST00000423902 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.62
CHD7-201ENST00000423902 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
CHD7-201ENST00000423902 NUP155O75694 1391 aa11.15□□□□□ -0.62
CHD7-201ENST00000423902 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms