RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
ABCA1-203ENST00000423487 KIAA0586Q9BVV6 1533 aa25.7■■□□□ 1.7
ABCA1-203ENST00000423487 CTTNBP2Q8WZ74 1663 aa25.68■■□□□ 1.7
ABCA1-203ENST00000423487 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
ABCA1-203ENST00000423487 IQGAP2Q13576 1575 aa25.62■■□□□ 1.69
ABCA1-203ENST00000423487 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
ABCA1-203ENST00000423487 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.68
ABCA1-203ENST00000423487 CLASP1Q7Z460 1538 aa25.55■■□□□ 1.68
ABCA1-203ENST00000423487 CLIP1P30622 1438 aa25.55■■□□□ 1.68
ABCA1-203ENST00000423487 JPH4Q96JJ6 628 aa25.53■■□□□ 1.68
ABCA1-203ENST00000423487 UGGT2Q9NYU1 1516 aa25.51■■□□□ 1.67
ABCA1-203ENST00000423487 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
ABCA1-203ENST00000423487 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.66
ABCA1-203ENST00000423487 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
ABCA1-203ENST00000423487 CARMIL2Q6F5E8 1435 aa25.42■■□□□ 1.66
ABCA1-203ENST00000423487 SAMD9Q5K651 1589 aa25.41■■□□□ 1.66
ABCA1-203ENST00000423487 PRG4Q92954 1404 aaPredicted RBP25.41■■□□□ 1.66
ABCA1-203ENST00000423487 DISP1Q96F81 1524 aa25.39■■□□□ 1.66
ABCA1-203ENST00000423487 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
ABCA1-203ENST00000423487 KIAA0556O60303 1618 aa25.36■■□□□ 1.65
ABCA1-203ENST00000423487 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
ABCA1-203ENST00000423487 FHOD3Q2V2M9 1422 aa25.34■■□□□ 1.65
ABCA1-203ENST00000423487 FMN1Q68DA7 1419 aa25.25■■□□□ 1.63
ABCA1-203ENST00000423487 ERCC6L2Q5T890 1561 aa25.25■■□□□ 1.63
ABCA1-203ENST00000423487 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
ABCA1-203ENST00000423487 PTPRGP23470 1445 aa25.21■■□□□ 1.63
ABCA1-203ENST00000423487 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
ABCA1-203ENST00000423487 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
ABCA1-203ENST00000423487 CASKIN1Q8WXD9 1431 aa25.11■■□□□ 1.61
ABCA1-203ENST00000423487 FYCO1Q9BQS8 1478 aa25.08■■□□□ 1.61
ABCA1-203ENST00000423487 PLB1Q6P1J6 1458 aa25.07■■□□□ 1.6
ABCA1-203ENST00000423487 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
ABCA1-203ENST00000423487 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
ABCA1-203ENST00000423487 RIMBP3CA6NJZ7 1639 aa25.06■■□□□ 1.6
ABCA1-203ENST00000423487 RIMBP3BA6NNM3 1639 aa25.06■■□□□ 1.6
ABCA1-203ENST00000423487 RIMBP3Q9UFD9 1639 aa25.06■■□□□ 1.6
ABCA1-203ENST00000423487 UACAQ9BZF9 1416 aa25.05■■□□□ 1.6
ABCA1-203ENST00000423487 RAPGEF6Q8TEU7 1601 aa25.05■■□□□ 1.6
ABCA1-203ENST00000423487 ABCA8O94911 1581 aa25.04■■□□□ 1.6
ABCA1-203ENST00000423487 APLP2Q06481 763 aa25.02■■□□□ 1.6
ABCA1-203ENST00000423487 HECW1Q76N89 1606 aa25.02■■□□□ 1.6
ABCA1-203ENST00000423487 NUP153P49790 1475 aaKnown RBP24.98■■□□□ 1.59
ABCA1-203ENST00000423487 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
ABCA1-203ENST00000423487 UHRF1BP1LA0JNW5 1464 aa24.97■■□□□ 1.59
ABCA1-203ENST00000423487 CCDC18Q5T9S5 1454 aa24.95■■□□□ 1.58
ABCA1-203ENST00000423487 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
ABCA1-203ENST00000423487 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
ABCA1-203ENST00000423487 EPRSP07814 1512 aaKnown RBP24.93■■□□□ 1.58
ABCA1-203ENST00000423487 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
ABCA1-203ENST00000423487 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
ABCA1-203ENST00000423487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.88■■□□□ 1.57
ABCA1-203ENST00000423487 HNRNPUL2Q1KMD3 747 aaKnown RBP24.88■■□□□ 1.57
ABCA1-203ENST00000423487 TIAM1Q13009 1591 aa24.87■■□□□ 1.57
ABCA1-203ENST00000423487 ADCY10Q96PN6 1610 aa24.87■■□□□ 1.57
ABCA1-203ENST00000423487 ATP10BO94823 1461 aa24.87■■□□□ 1.57
ABCA1-203ENST00000423487 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
ABCA1-203ENST00000423487 KDM5BQ9UGL1 1544 aa24.85■■□□□ 1.57
ABCA1-203ENST00000423487 LRRIQ1Q96JM4 1722 aa24.85■■□□□ 1.57
ABCA1-203ENST00000423487 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
ABCA1-203ENST00000423487 CFAP43Q8NDM7 1665 aa24.84■■□□□ 1.57
ABCA1-203ENST00000423487 NPM1P06748 294 aaKnown RBP eCLIP24.82■■□□□ 1.56
ABCA1-203ENST00000423487 KANK4Q5T7N3 995 aaPredicted RBP24.79■■□□□ 1.56
ABCA1-203ENST00000423487 LRRC9Q6ZRR7 1453 aa24.78■■□□□ 1.56
ABCA1-203ENST00000423487 MTUS2Q5JR59 1369 aa24.78■■□□□ 1.56
ABCA1-203ENST00000423487 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
ABCA1-203ENST00000423487 ZCCHC11Q5TAX3 1644 aaKnown RBP24.76■■□□□ 1.55
ABCA1-203ENST00000423487 PPARGC1BQ86YN6 1023 aaKnown RBP24.76■■□□□ 1.55
ABCA1-203ENST00000423487 EHBP1L1Q8N3D4 1523 aa24.72■■□□□ 1.55
ABCA1-203ENST00000423487 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
ABCA1-203ENST00000423487 MAGI3Q5TCQ9 1506 aa24.7■■□□□ 1.55
ABCA1-203ENST00000423487 ASXL2Q76L83 1435 aa24.65■■□□□ 1.54
ABCA1-203ENST00000423487 WDR7Q9Y4E6 1490 aa24.63■■□□□ 1.53
ABCA1-203ENST00000423487 MAPKBP1O60336 1514 aa24.61■■□□□ 1.53
ABCA1-203ENST00000423487 SUPT6HQ7KZ85 1726 aaKnown RBP24.6■■□□□ 1.53
ABCA1-203ENST00000423487 NCOA2Q15596 1464 aa24.59■■□□□ 1.53
ABCA1-203ENST00000423487 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
ABCA1-203ENST00000423487 KIF14Q15058 1648 aa24.58■■□□□ 1.53
ABCA1-203ENST00000423487 ABCC10Q5T3U5 1492 aa24.51■■□□□ 1.51
ABCA1-203ENST00000423487 PHLDB1Q86UU1 1377 aa24.51■■□□□ 1.51
ABCA1-203ENST00000423487 CCNB3Q8WWL7 1395 aa24.51■■□□□ 1.51
ABCA1-203ENST00000423487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.47■■□□□ 1.51
ABCA1-203ENST00000423487 MYOM3Q5VTT5 1437 aa24.46■■□□□ 1.51
ABCA1-203ENST00000423487 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
ABCA1-203ENST00000423487 TTC37Q6PGP7 1564 aa24.43■■□□□ 1.5
ABCA1-203ENST00000423487 ABCA9Q8IUA7 1624 aa24.42■■□□□ 1.5
ABCA1-203ENST00000423487 MIA2Q96PC5 1412 aa24.4■■□□□ 1.5
ABCA1-203ENST00000423487 FGD6Q6ZV73 1430 aa24.39■■□□□ 1.5
ABCA1-203ENST00000423487 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.49
ABCA1-203ENST00000423487 ITSN2Q9NZM3 1697 aa24.39■■□□□ 1.49
ABCA1-203ENST00000423487 RRBP1Q9P2E9 1410 aaKnown RBP24.39■■□□□ 1.49
ABCA1-203ENST00000423487 GLI2P10070 1586 aa24.39■■□□□ 1.49
ABCA1-203ENST00000423487 FAM69CQ0P6D2 419 aa24.38■■□□□ 1.49
ABCA1-203ENST00000423487 DIP2BQ9P265 1576 aa24.37■■□□□ 1.49
ABCA1-203ENST00000423487 PLCH2O75038 1416 aa24.37■■□□□ 1.49
ABCA1-203ENST00000423487 TRIM26Q12899 539 aaPredicted RBP24.37■■□□□ 1.49
ABCA1-203ENST00000423487 CD109Q6YHK3 1445 aa24.35■■□□□ 1.49
ABCA1-203ENST00000423487 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
ABCA1-203ENST00000423487 MYO5CQ9NQX4 1742 aa24.34■■□□□ 1.49
ABCA1-203ENST00000423487 PREX2Q70Z35 1606 aa24.34■■□□□ 1.49
ABCA1-203ENST00000423487 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms