RNA–Protein interactions for RNA: ENST00000423350.1

TCN2-204, Transcript of transcobalamin 2, humanhuman

TSL 2

Gene TCN2, Length 637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-204ENST00000423350 TNIKQ9UKE5 1360 aa19.49■□□□□ 0.71
TCN2-204ENST00000423350 NUP160Q12769 1436 aa19.49■□□□□ 0.71
TCN2-204ENST00000423350 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
TCN2-204ENST00000423350 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
TCN2-204ENST00000423350 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
TCN2-204ENST00000423350 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
TCN2-204ENST00000423350 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
TCN2-204ENST00000423350 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
TCN2-204ENST00000423350 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
TCN2-204ENST00000423350 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
TCN2-204ENST00000423350 CLIP1P30622 1438 aa19.28■□□□□ 0.68
TCN2-204ENST00000423350 JPH4Q96JJ6 628 aa19.28■□□□□ 0.68
TCN2-204ENST00000423350 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
TCN2-204ENST00000423350 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
TCN2-204ENST00000423350 SAMD9Q5K651 1589 aa19.26■□□□□ 0.67
TCN2-204ENST00000423350 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
TCN2-204ENST00000423350 EFCAB5A4FU69 1503 aa19.21■□□□□ 0.67
TCN2-204ENST00000423350 ARAP1Q96P48 1450 aa19.21■□□□□ 0.67
TCN2-204ENST00000423350 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
TCN2-204ENST00000423350 P3H3Q8IVL6 736 aa19.2■□□□□ 0.66
TCN2-204ENST00000423350 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
TCN2-204ENST00000423350 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
TCN2-204ENST00000423350 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
TCN2-204ENST00000423350 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
TCN2-204ENST00000423350 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
TCN2-204ENST00000423350 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
TCN2-204ENST00000423350 TTBK1Q5TCY1 1321 aaPredicted RBP19.03■□□□□ 0.64
TCN2-204ENST00000423350 FMN1Q68DA7 1419 aa19.02■□□□□ 0.64
TCN2-204ENST00000423350 PTPRGP23470 1445 aa19.01■□□□□ 0.63
TCN2-204ENST00000423350 PCF11O94913 1555 aaKnown RBP19.01■□□□□ 0.63
TCN2-204ENST00000423350 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
TCN2-204ENST00000423350 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
TCN2-204ENST00000423350 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
TCN2-204ENST00000423350 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
TCN2-204ENST00000423350 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
TCN2-204ENST00000423350 ABCA8O94911 1581 aa18.97■□□□□ 0.63
TCN2-204ENST00000423350 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
TCN2-204ENST00000423350 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
TCN2-204ENST00000423350 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
TCN2-204ENST00000423350 NUP153P49790 1475 aaKnown RBP18.91■□□□□ 0.62
TCN2-204ENST00000423350 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
TCN2-204ENST00000423350 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
TCN2-204ENST00000423350 ABCC2Q92887 1545 aa18.88■□□□□ 0.61
TCN2-204ENST00000423350 UHRF1BP1LA0JNW5 1464 aa18.87■□□□□ 0.61
TCN2-204ENST00000423350 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
TCN2-204ENST00000423350 ADCY10Q96PN6 1610 aa18.86■□□□□ 0.61
TCN2-204ENST00000423350 EPRSP07814 1512 aaKnown RBP18.85■□□□□ 0.61
TCN2-204ENST00000423350 ARID3CA6NKF2 412 aa18.84■□□□□ 0.61
TCN2-204ENST00000423350 CDK13Q14004 1512 aaKnown RBP18.84■□□□□ 0.61
TCN2-204ENST00000423350 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.6
TCN2-204ENST00000423350 CFAP43Q8NDM7 1665 aa18.82■□□□□ 0.6
TCN2-204ENST00000423350 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
TCN2-204ENST00000423350 ATP10BO94823 1461 aa18.82■□□□□ 0.6
TCN2-204ENST00000423350 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
TCN2-204ENST00000423350 CCDC18Q5T9S5 1454 aa18.79■□□□□ 0.6
TCN2-204ENST00000423350 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
TCN2-204ENST00000423350 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
TCN2-204ENST00000423350 PPARGC1BQ86YN6 1023 aaKnown RBP18.77■□□□□ 0.6
TCN2-204ENST00000423350 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
TCN2-204ENST00000423350 ZCCHC11Q5TAX3 1644 aaKnown RBP18.77■□□□□ 0.6
TCN2-204ENST00000423350 APLP2Q06481 763 aa18.74■□□□□ 0.59
TCN2-204ENST00000423350 LRRC9Q6ZRR7 1453 aa18.73■□□□□ 0.59
TCN2-204ENST00000423350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
TCN2-204ENST00000423350 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
TCN2-204ENST00000423350 EHBP1L1Q8N3D4 1523 aa18.67■□□□□ 0.58
TCN2-204ENST00000423350 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
TCN2-204ENST00000423350 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
TCN2-204ENST00000423350 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
TCN2-204ENST00000423350 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
TCN2-204ENST00000423350 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
TCN2-204ENST00000423350 ASXL2Q76L83 1435 aa18.62■□□□□ 0.57
TCN2-204ENST00000423350 KIF14Q15058 1648 aa18.62■□□□□ 0.57
TCN2-204ENST00000423350 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
TCN2-204ENST00000423350 MAPKBP1O60336 1514 aa18.59■□□□□ 0.57
TCN2-204ENST00000423350 WDR7Q9Y4E6 1490 aa18.59■□□□□ 0.57
TCN2-204ENST00000423350 NCOA2Q15596 1464 aa18.58■□□□□ 0.57
TCN2-204ENST00000423350 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
TCN2-204ENST00000423350 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
TCN2-204ENST00000423350 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
TCN2-204ENST00000423350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
TCN2-204ENST00000423350 TTC37Q6PGP7 1564 aa18.52■□□□□ 0.56
TCN2-204ENST00000423350 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
TCN2-204ENST00000423350 ABCA9Q8IUA7 1624 aa18.48■□□□□ 0.55
TCN2-204ENST00000423350 GPATCH8Q9UKJ3 1502 aaKnown RBP18.48■□□□□ 0.55
TCN2-204ENST00000423350 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
TCN2-204ENST00000423350 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
TCN2-204ENST00000423350 DIP2BQ9P265 1576 aa18.46■□□□□ 0.55
TCN2-204ENST00000423350 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
TCN2-204ENST00000423350 GLI2P10070 1586 aa18.44■□□□□ 0.54
TCN2-204ENST00000423350 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
TCN2-204ENST00000423350 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
TCN2-204ENST00000423350 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
TCN2-204ENST00000423350 KIF13AQ9H1H9 1805 aa18.43■□□□□ 0.54
TCN2-204ENST00000423350 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
TCN2-204ENST00000423350 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
TCN2-204ENST00000423350 PLCH2O75038 1416 aa18.4■□□□□ 0.54
TCN2-204ENST00000423350 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
TCN2-204ENST00000423350 MAP3K4Q9Y6R4 1608 aa18.39■□□□□ 0.53
TCN2-204ENST00000423350 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
TCN2-204ENST00000423350 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms