RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
USB1-202ENST00000423271 JPH4Q96JJ6 628 aa26.25■■□□□ 1.79
USB1-202ENST00000423271 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
USB1-202ENST00000423271 KIAA0586Q9BVV6 1533 aa26.19■■□□□ 1.78
USB1-202ENST00000423271 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
USB1-202ENST00000423271 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
USB1-202ENST00000423271 ADCY10Q96PN6 1610 aa25.98■■□□□ 1.75
USB1-202ENST00000423271 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
USB1-202ENST00000423271 CARMIL2Q6F5E8 1435 aa25.89■■□□□ 1.74
USB1-202ENST00000423271 PTPRGP23470 1445 aa25.88■■□□□ 1.73
USB1-202ENST00000423271 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
USB1-202ENST00000423271 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
USB1-202ENST00000423271 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
USB1-202ENST00000423271 DISP1Q96F81 1524 aa25.86■■□□□ 1.73
USB1-202ENST00000423271 NPM1P06748 294 aaKnown RBP eCLIP25.84■■□□□ 1.73
USB1-202ENST00000423271 UGGT2Q9NYU1 1516 aa25.83■■□□□ 1.73
USB1-202ENST00000423271 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
USB1-202ENST00000423271 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
USB1-202ENST00000423271 ABCC10Q5T3U5 1492 aa25.8■■□□□ 1.72
USB1-202ENST00000423271 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
USB1-202ENST00000423271 KIAA0556O60303 1618 aa25.77■■□□□ 1.72
USB1-202ENST00000423271 FAM69CQ0P6D2 419 aa25.74■■□□□ 1.71
USB1-202ENST00000423271 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
USB1-202ENST00000423271 UHRF1BP1LA0JNW5 1464 aa25.71■■□□□ 1.71
USB1-202ENST00000423271 UACAQ9BZF9 1416 aa25.71■■□□□ 1.71
USB1-202ENST00000423271 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
USB1-202ENST00000423271 ASXL2Q76L83 1435 aa25.62■■□□□ 1.69
USB1-202ENST00000423271 GOLGA3Q08378 1498 aa25.61■■□□□ 1.69
USB1-202ENST00000423271 KDM5BQ9UGL1 1544 aa25.59■■□□□ 1.69
USB1-202ENST00000423271 TSPOAP1O95153 1857 aa25.59■■□□□ 1.69
USB1-202ENST00000423271 PLB1Q6P1J6 1458 aa25.58■■□□□ 1.69
USB1-202ENST00000423271 EEA1Q15075 1411 aa25.57■■□□□ 1.68
USB1-202ENST00000423271 ZCCHC11Q5TAX3 1644 aaKnown RBP25.57■■□□□ 1.68
USB1-202ENST00000423271 ABCA8O94911 1581 aa25.52■■□□□ 1.68
USB1-202ENST00000423271 GLI2P10070 1586 aa25.51■■□□□ 1.67
USB1-202ENST00000423271 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
USB1-202ENST00000423271 EPRSP07814 1512 aaKnown RBP25.47■■□□□ 1.67
USB1-202ENST00000423271 KDM6BO15054 1643 aa25.47■■□□□ 1.67
USB1-202ENST00000423271 PPRC1Q5VV67 1664 aaKnown RBP25.46■■□□□ 1.67
USB1-202ENST00000423271 SAMD9Q5K651 1589 aa25.45■■□□□ 1.66
USB1-202ENST00000423271 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
USB1-202ENST00000423271 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
USB1-202ENST00000423271 WDR7Q9Y4E6 1490 aa25.41■■□□□ 1.66
USB1-202ENST00000423271 MAP3K4Q9Y6R4 1608 aa25.41■■□□□ 1.66
USB1-202ENST00000423271 KIF21BO75037 1637 aa25.4■■□□□ 1.66
USB1-202ENST00000423271 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
USB1-202ENST00000423271 ARID3CA6NKF2 412 aa25.32■■□□□ 1.64
USB1-202ENST00000423271 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
USB1-202ENST00000423271 FHOD3Q2V2M9 1422 aa25.29■■□□□ 1.64
USB1-202ENST00000423271 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
USB1-202ENST00000423271 ATP10BO94823 1461 aa25.28■■□□□ 1.64
USB1-202ENST00000423271 TEX14Q8IWB6 1497 aa25.27■■□□□ 1.64
USB1-202ENST00000423271 KCNH8Q96L42 1107 aa25.26■■□□□ 1.63
USB1-202ENST00000423271 COL17A1Q9UMD9 1497 aaPredicted RBP25.26■■□□□ 1.63
USB1-202ENST00000423271 CFAP43Q8NDM7 1665 aa25.24■■□□□ 1.63
USB1-202ENST00000423271 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
USB1-202ENST00000423271 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
USB1-202ENST00000423271 CD109Q6YHK3 1445 aa25.21■■□□□ 1.63
USB1-202ENST00000423271 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
USB1-202ENST00000423271 MAGI3Q5TCQ9 1506 aa25.19■■□□□ 1.62
USB1-202ENST00000423271 UBTFP17480 764 aaKnown RBP25.15■■□□□ 1.62
USB1-202ENST00000423271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
USB1-202ENST00000423271 HNRNPUL2Q1KMD3 747 aaKnown RBP25.11■■□□□ 1.61
USB1-202ENST00000423271 ABCA9Q8IUA7 1624 aa25.11■■□□□ 1.61
USB1-202ENST00000423271 KDM4FA0A1W2PPD8 638 aa25.08■■□□□ 1.61
USB1-202ENST00000423271 ARHGAP35Q9NRY4 1499 aa25.06■■□□□ 1.6
USB1-202ENST00000423271 CDK13Q14004 1512 aaKnown RBP25.01■■□□□ 1.59
USB1-202ENST00000423271 ARAP3Q8WWN8 1544 aa24.98■■□□□ 1.59
USB1-202ENST00000423271 ADGRL1O94910 1474 aa24.97■■□□□ 1.59
USB1-202ENST00000423271 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
USB1-202ENST00000423271 PLEKHD1A6NEE1 506 aa24.96■■□□□ 1.59
USB1-202ENST00000423271 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
USB1-202ENST00000423271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.58
USB1-202ENST00000423271 NEO1Q92859 1461 aa24.92■■□□□ 1.58
USB1-202ENST00000423271 TTC37Q6PGP7 1564 aa24.92■■□□□ 1.58
USB1-202ENST00000423271 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
USB1-202ENST00000423271 PHLDB1Q86UU1 1377 aa24.9■■□□□ 1.58
USB1-202ENST00000423271 FRMPD1Q5SYB0 1578 aa24.86■■□□□ 1.57
USB1-202ENST00000423271 RAPGEF3O95398 923 aa24.85■■□□□ 1.57
USB1-202ENST00000423271 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
USB1-202ENST00000423271 FANCAO15360 1455 aa24.82■■□□□ 1.56
USB1-202ENST00000423271 PCF11O94913 1555 aaKnown RBP24.81■■□□□ 1.56
USB1-202ENST00000423271 CFAP74Q9C0B2 1584 aa24.8■■□□□ 1.56
USB1-202ENST00000423271 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
USB1-202ENST00000423271 KIF14Q15058 1648 aa24.78■■□□□ 1.56
USB1-202ENST00000423271 RICTORQ6R327 1708 aa24.76■■□□□ 1.55
USB1-202ENST00000423271 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
USB1-202ENST00000423271 CASKIN1Q8WXD9 1431 aa24.75■■□□□ 1.55
USB1-202ENST00000423271 CDK11AQ9UQ88 783 aaPredicted RBP24.74■■□□□ 1.55
USB1-202ENST00000423271 CLIP1P30622 1438 aa24.74■■□□□ 1.55
USB1-202ENST00000423271 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
USB1-202ENST00000423271 PLCH2O75038 1416 aa24.73■■□□□ 1.55
USB1-202ENST00000423271 MYO5CQ9NQX4 1742 aa24.72■■□□□ 1.55
USB1-202ENST00000423271 ARHGEF40Q8TER5 1519 aa24.69■■□□□ 1.54
USB1-202ENST00000423271 CCDC18Q5T9S5 1454 aa24.69■■□□□ 1.54
USB1-202ENST00000423271 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
USB1-202ENST00000423271 ZMYM4Q5VZL5 1548 aa24.66■■□□□ 1.54
USB1-202ENST00000423271 SCAPERQ9BY12 1400 aa24.64■■□□□ 1.54
USB1-202ENST00000423271 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
USB1-202ENST00000423271 ADAMTSL3P82987 1691 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms