RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KIF13AQ9H1H9 1805 aa28.29■■■□□ 2.12
COL18A1-205ENST00000423214 JPH4Q96JJ6 628 aa28.25■■■□□ 2.11
COL18A1-205ENST00000423214 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
COL18A1-205ENST00000423214 IGF1RP08069 1367 aa28.17■■■□□ 2.1
COL18A1-205ENST00000423214 ADCY10Q96PN6 1610 aa28.14■■■□□ 2.1
COL18A1-205ENST00000423214 MAPKBP1O60336 1514 aa28.08■■■□□ 2.08
COL18A1-205ENST00000423214 CARMIL1Q5VZK9 1371 aa28.04■■■□□ 2.08
COL18A1-205ENST00000423214 IQGAP2Q13576 1575 aa28.03■■■□□ 2.08
COL18A1-205ENST00000423214 DIP2BQ9P265 1576 aa28.03■■■□□ 2.08
COL18A1-205ENST00000423214 NPM1P06748 294 aaKnown RBP eCLIP28.03■■■□□ 2.08
COL18A1-205ENST00000423214 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
COL18A1-205ENST00000423214 CARMIL2Q6F5E8 1435 aa27.94■■■□□ 2.06
COL18A1-205ENST00000423214 TSPOAP1O95153 1857 aa27.94■■■□□ 2.06
COL18A1-205ENST00000423214 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
COL18A1-205ENST00000423214 FAM69CQ0P6D2 419 aa27.9■■■□□ 2.06
COL18A1-205ENST00000423214 PTPRGP23470 1445 aa27.89■■■□□ 2.06
COL18A1-205ENST00000423214 CTTNBP2Q8WZ74 1663 aa27.87■■■□□ 2.05
COL18A1-205ENST00000423214 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
COL18A1-205ENST00000423214 RAPGEF2Q9Y4G8 1499 aa27.85■■■□□ 2.05
COL18A1-205ENST00000423214 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
COL18A1-205ENST00000423214 KDM6BO15054 1643 aa27.81■■■□□ 2.04
COL18A1-205ENST00000423214 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
COL18A1-205ENST00000423214 DISP1Q96F81 1524 aa27.79■■■□□ 2.04
COL18A1-205ENST00000423214 UGGT2Q9NYU1 1516 aa27.78■■■□□ 2.04
COL18A1-205ENST00000423214 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
COL18A1-205ENST00000423214 UHRF1BP1LA0JNW5 1464 aa27.74■■■□□ 2.03
COL18A1-205ENST00000423214 UACAQ9BZF9 1416 aa27.71■■■□□ 2.03
COL18A1-205ENST00000423214 ASXL2Q76L83 1435 aa27.69■■■□□ 2.02
COL18A1-205ENST00000423214 ZCCHC11Q5TAX3 1644 aaKnown RBP27.69■■■□□ 2.02
COL18A1-205ENST00000423214 PLB1Q6P1J6 1458 aa27.69■■■□□ 2.02
COL18A1-205ENST00000423214 PPRC1Q5VV67 1664 aaKnown RBP27.66■■■□□ 2.02
COL18A1-205ENST00000423214 GLI2P10070 1586 aa27.66■■■□□ 2.02
COL18A1-205ENST00000423214 KDM5BQ9UGL1 1544 aa27.62■■■□□ 2.01
COL18A1-205ENST00000423214 MAP3K4Q9Y6R4 1608 aa27.58■■■□□ 2.01
COL18A1-205ENST00000423214 GOLGA3Q08378 1498 aa27.57■■■□□ 2
COL18A1-205ENST00000423214 EPRSP07814 1512 aaKnown RBP27.53■■■□□ 2
COL18A1-205ENST00000423214 PRXQ9BXM0 1461 aa27.53■■■□□ 2
COL18A1-205ENST00000423214 ABCA8O94911 1581 aa27.47■■□□□ 1.99
COL18A1-205ENST00000423214 TEX14Q8IWB6 1497 aa27.46■■□□□ 1.99
COL18A1-205ENST00000423214 WDR7Q9Y4E6 1490 aa27.46■■□□□ 1.99
COL18A1-205ENST00000423214 CFAP43Q8NDM7 1665 aa27.43■■□□□ 1.98
COL18A1-205ENST00000423214 SAMD9Q5K651 1589 aa27.32■■□□□ 1.96
COL18A1-205ENST00000423214 KDM4FA0A1W2PPD8 638 aa27.29■■□□□ 1.96
COL18A1-205ENST00000423214 COL17A1Q9UMD9 1497 aaPredicted RBP27.28■■□□□ 1.96
COL18A1-205ENST00000423214 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
COL18A1-205ENST00000423214 EEA1Q15075 1411 aa27.25■■□□□ 1.95
COL18A1-205ENST00000423214 RAPGEF6Q8TEU7 1601 aa27.25■■□□□ 1.95
COL18A1-205ENST00000423214 MAGI3Q5TCQ9 1506 aa27.25■■□□□ 1.95
COL18A1-205ENST00000423214 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
COL18A1-205ENST00000423214 ADGRL1O94910 1474 aa27.24■■□□□ 1.95
COL18A1-205ENST00000423214 CD109Q6YHK3 1445 aa27.24■■□□□ 1.95
COL18A1-205ENST00000423214 P3H3Q8IVL6 736 aa27.2■■□□□ 1.94
COL18A1-205ENST00000423214 KCNH8Q96L42 1107 aa27.2■■□□□ 1.94
COL18A1-205ENST00000423214 ATP10BO94823 1461 aa27.15■■□□□ 1.94
COL18A1-205ENST00000423214 ARID3CA6NKF2 412 aa27.15■■□□□ 1.94
COL18A1-205ENST00000423214 ABCA9Q8IUA7 1624 aa27.15■■□□□ 1.94
COL18A1-205ENST00000423214 KIF21BO75037 1637 aa27.13■■□□□ 1.93
COL18A1-205ENST00000423214 FHOD3Q2V2M9 1422 aa27.06■■□□□ 1.92
COL18A1-205ENST00000423214 EFCAB5A4FU69 1503 aa27.06■■□□□ 1.92
COL18A1-205ENST00000423214 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
COL18A1-205ENST00000423214 NUP153P49790 1475 aaKnown RBP27.03■■□□□ 1.92
COL18A1-205ENST00000423214 ARAP3Q8WWN8 1544 aa27.03■■□□□ 1.92
COL18A1-205ENST00000423214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
COL18A1-205ENST00000423214 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
COL18A1-205ENST00000423214 PHLDB1Q86UU1 1377 aa26.94■■□□□ 1.9
COL18A1-205ENST00000423214 NEO1Q92859 1461 aa26.93■■□□□ 1.9
COL18A1-205ENST00000423214 CFAP74Q9C0B2 1584 aa26.93■■□□□ 1.9
COL18A1-205ENST00000423214 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
COL18A1-205ENST00000423214 FRMPD1Q5SYB0 1578 aa26.89■■□□□ 1.9
COL18A1-205ENST00000423214 TTC37Q6PGP7 1564 aa26.85■■□□□ 1.89
COL18A1-205ENST00000423214 RICTORQ6R327 1708 aa26.85■■□□□ 1.89
COL18A1-205ENST00000423214 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
COL18A1-205ENST00000423214 CDK13Q14004 1512 aaKnown RBP26.83■■□□□ 1.89
COL18A1-205ENST00000423214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.82■■□□□ 1.881e-6■□□□□ 10.7
COL18A1-205ENST00000423214 PLEKHD1A6NEE1 506 aa26.81■■□□□ 1.88
COL18A1-205ENST00000423214 ARHGEF40Q8TER5 1519 aa26.8■■□□□ 1.88
COL18A1-205ENST00000423214 ADAMTSL3P82987 1691 aa26.79■■□□□ 1.88
COL18A1-205ENST00000423214 BCORL1Q5H9F3 1711 aa26.78■■□□□ 1.88
COL18A1-205ENST00000423214 FANCAO15360 1455 aa26.77■■□□□ 1.88
COL18A1-205ENST00000423214 RAPGEF3O95398 923 aa26.77■■□□□ 1.88
COL18A1-205ENST00000423214 EHMT2Q96KQ7 1210 aa26.77■■□□□ 1.88
COL18A1-205ENST00000423214 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
COL18A1-205ENST00000423214 MYO5CQ9NQX4 1742 aa26.75■■□□□ 1.87
COL18A1-205ENST00000423214 FMN1Q68DA7 1419 aa26.74■■□□□ 1.87
COL18A1-205ENST00000423214 DENND4BO75064 1496 aaPredicted RBP26.74■■□□□ 1.87
COL18A1-205ENST00000423214 AKNAQ7Z591 1439 aa26.72■■□□□ 1.87
COL18A1-205ENST00000423214 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
COL18A1-205ENST00000423214 MADDQ8WXG6 1647 aa26.71■■□□□ 1.87
COL18A1-205ENST00000423214 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.86
COL18A1-205ENST00000423214 ZMYM4Q5VZL5 1548 aa26.69■■□□□ 1.86
COL18A1-205ENST00000423214 LRRIQ1Q96JM4 1722 aa26.68■■□□□ 1.86
COL18A1-205ENST00000423214 KIF14Q15058 1648 aa26.67■■□□□ 1.86
COL18A1-205ENST00000423214 RIMS1Q86UR5 1692 aaKnown RBP26.66■■□□□ 1.86
COL18A1-205ENST00000423214 PTPRMP28827 1452 aa26.66■■□□□ 1.86
COL18A1-205ENST00000423214 ATP1B4Q9UN42 357 aaPredicted RBP26.65■■□□□ 1.86
COL18A1-205ENST00000423214 ARID4BQ4LE39 1312 aaPredicted RBP26.65■■□□□ 1.86
COL18A1-205ENST00000423214 ZFYVE16Q7Z3T8 1539 aa26.64■■□□□ 1.85
COL18A1-205ENST00000423214 PLCH2O75038 1416 aa26.57■■□□□ 1.84
COL18A1-205ENST00000423214 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
COL18A1-205ENST00000423214 FER1L4A9Z1Z3 1794 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms