RNA–Protein interactions for RNA: ENST00000422447.7

LDHA-205, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-205ENST00000422447 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.661e-8■■■■□ 22.9
LDHA-205ENST00000422447 ZNF608Q9ULD9 1512 aaPredicted RBP19.16■□□□□ 0.66
LDHA-205ENST00000422447 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
LDHA-205ENST00000422447 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
LDHA-205ENST00000422447 CUL7Q14999 1698 aa19.1■□□□□ 0.65
LDHA-205ENST00000422447 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
LDHA-205ENST00000422447 EIF4G3O43432 1585 aaKnown RBP19.04■□□□□ 0.64
LDHA-205ENST00000422447 FHOD3Q2V2M9 1422 aa19.02■□□□□ 0.64
LDHA-205ENST00000422447 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
LDHA-205ENST00000422447 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
LDHA-205ENST00000422447 GRIN2BQ13224 1484 aa19■□□□□ 0.63
LDHA-205ENST00000422447 TIAM1Q13009 1591 aa18.99■□□□□ 0.63
LDHA-205ENST00000422447 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
LDHA-205ENST00000422447 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
LDHA-205ENST00000422447 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
LDHA-205ENST00000422447 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
LDHA-205ENST00000422447 EFCAB5A4FU69 1503 aa18.95■□□□□ 0.62
LDHA-205ENST00000422447 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
LDHA-205ENST00000422447 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
LDHA-205ENST00000422447 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
LDHA-205ENST00000422447 CTTNBP2Q8WZ74 1663 aa18.94■□□□□ 0.62
LDHA-205ENST00000422447 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
LDHA-205ENST00000422447 ITGAEP38570 1179 aa18.89■□□□□ 0.61
LDHA-205ENST00000422447 PHLDB1Q86UU1 1377 aa18.88■□□□□ 0.61
LDHA-205ENST00000422447 FYCO1Q9BQS8 1478 aa18.88■□□□□ 0.61
LDHA-205ENST00000422447 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
LDHA-205ENST00000422447 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
LDHA-205ENST00000422447 CFAP43Q8NDM7 1665 aa18.83■□□□□ 0.61
LDHA-205ENST00000422447 SAMD9Q5K651 1589 aa18.83■□□□□ 0.6
LDHA-205ENST00000422447 MAGI1Q96QZ7 1491 aaPredicted RBP18.82■□□□□ 0.6
LDHA-205ENST00000422447 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
LDHA-205ENST00000422447 FBLN2P98095 1184 aa18.8■□□□□ 0.6
LDHA-205ENST00000422447 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
LDHA-205ENST00000422447 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
LDHA-205ENST00000422447 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
LDHA-205ENST00000422447 IQGAP2Q13576 1575 aa18.76■□□□□ 0.59
LDHA-205ENST00000422447 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
LDHA-205ENST00000422447 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
LDHA-205ENST00000422447 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
LDHA-205ENST00000422447 CEP170Q5SW79 1584 aa18.73■□□□□ 0.59
LDHA-205ENST00000422447 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
LDHA-205ENST00000422447 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
LDHA-205ENST00000422447 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
LDHA-205ENST00000422447 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
LDHA-205ENST00000422447 LRRIQ1Q96JM4 1722 aa18.67■□□□□ 0.58
LDHA-205ENST00000422447 NUP160Q12769 1436 aa18.64■□□□□ 0.58
LDHA-205ENST00000422447 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.58
LDHA-205ENST00000422447 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.57
LDHA-205ENST00000422447 CHD1O14646 1710 aa18.64■□□□□ 0.57
LDHA-205ENST00000422447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
LDHA-205ENST00000422447 NCOA2Q15596 1464 aa18.62■□□□□ 0.57
LDHA-205ENST00000422447 DISP1Q96F81 1524 aa18.61■□□□□ 0.57
LDHA-205ENST00000422447 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
LDHA-205ENST00000422447 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
LDHA-205ENST00000422447 KIAA0556O60303 1618 aa18.58■□□□□ 0.56
LDHA-205ENST00000422447 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
LDHA-205ENST00000422447 EHBP1L1Q8N3D4 1523 aa18.56■□□□□ 0.56
LDHA-205ENST00000422447 MYOM3Q5VTT5 1437 aa18.56■□□□□ 0.56
LDHA-205ENST00000422447 MAPKBP1O60336 1514 aa18.56■□□□□ 0.56
LDHA-205ENST00000422447 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
LDHA-205ENST00000422447 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
LDHA-205ENST00000422447 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
LDHA-205ENST00000422447 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
LDHA-205ENST00000422447 CDK13Q14004 1512 aaKnown RBP18.54■□□□□ 0.56
LDHA-205ENST00000422447 SUPT6HQ7KZ85 1726 aaKnown RBP18.53■□□□□ 0.56
LDHA-205ENST00000422447 ARHGEF11O15085 1522 aa18.52■□□□□ 0.55
LDHA-205ENST00000422447 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
LDHA-205ENST00000422447 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
LDHA-205ENST00000422447 NUP153P49790 1475 aaKnown RBP18.44■□□□□ 0.54
LDHA-205ENST00000422447 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
LDHA-205ENST00000422447 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
LDHA-205ENST00000422447 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
LDHA-205ENST00000422447 MIER1Q8N108 512 aa18.42■□□□□ 0.54
LDHA-205ENST00000422447 CARMIL2Q6F5E8 1435 aa18.42■□□□□ 0.54
LDHA-205ENST00000422447 PLB1Q6P1J6 1458 aa18.42■□□□□ 0.54
LDHA-205ENST00000422447 NAIPQ13075 1403 aa18.41■□□□□ 0.54
LDHA-205ENST00000422447 CHIC2Q9UKJ5 165 aa18.4■□□□□ 0.54
LDHA-205ENST00000422447 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
LDHA-205ENST00000422447 RAPGEF6Q8TEU7 1601 aa18.39■□□□□ 0.54
LDHA-205ENST00000422447 ERCC6L2Q5T890 1561 aa18.39■□□□□ 0.53
LDHA-205ENST00000422447 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
LDHA-205ENST00000422447 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
LDHA-205ENST00000422447 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
LDHA-205ENST00000422447 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
LDHA-205ENST00000422447 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
LDHA-205ENST00000422447 UACAQ9BZF9 1416 aa18.35■□□□□ 0.53
LDHA-205ENST00000422447 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
LDHA-205ENST00000422447 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
LDHA-205ENST00000422447 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
LDHA-205ENST00000422447 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
LDHA-205ENST00000422447 ABCA8O94911 1581 aa18.29■□□□□ 0.52
LDHA-205ENST00000422447 PTPRGP23470 1445 aa18.29■□□□□ 0.52
LDHA-205ENST00000422447 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
LDHA-205ENST00000422447 PPP1R15AO75807 674 aaPredicted RBP18.26■□□□□ 0.51
LDHA-205ENST00000422447 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
LDHA-205ENST00000422447 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
LDHA-205ENST00000422447 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
LDHA-205ENST00000422447 DAPK1P53355 1430 aa18.24■□□□□ 0.51
LDHA-205ENST00000422447 ABCC5O15440 1437 aa18.23■□□□□ 0.51
LDHA-205ENST00000422447 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms