RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 JPH4Q96JJ6 628 aa44.06■■■■■ 4.64
SMDT1-202ENST00000422252 PRG4Q92954 1404 aaPredicted RBP44.04■■■■■ 4.64
SMDT1-202ENST00000422252 CARMIL1Q5VZK9 1371 aa43.92■■■■■ 4.62
SMDT1-202ENST00000422252 KIAA0586Q9BVV6 1533 aa43.9■■■■■ 4.62
SMDT1-202ENST00000422252 RAPGEF2Q9Y4G8 1499 aa43.57■■■■■ 4.56
SMDT1-202ENST00000422252 IQGAP2Q13576 1575 aa43.53■■■■■ 4.56
SMDT1-202ENST00000422252 CARMIL2Q6F5E8 1435 aa43.47■■■■■ 4.55
SMDT1-202ENST00000422252 ADCY10Q96PN6 1610 aa43.45■■■■■ 4.55
SMDT1-202ENST00000422252 NPM1P06748 294 aaKnown RBP eCLIP43.45■■■■■ 4.55
SMDT1-202ENST00000422252 PTPRGP23470 1445 aa43.41■■■■■ 4.54
SMDT1-202ENST00000422252 TNIKQ9UKE5 1360 aa43.38■■■■■ 4.53
SMDT1-202ENST00000422252 MAPKBP1O60336 1514 aa43.34■■■■■ 4.53
SMDT1-202ENST00000422252 KIF13AQ9H1H9 1805 aa43.32■■■■■ 4.52
SMDT1-202ENST00000422252 TTBK1Q5TCY1 1321 aaPredicted RBP43.31■■■■■ 4.52
SMDT1-202ENST00000422252 DISP1Q96F81 1524 aa43.29■■■■■ 4.52
SMDT1-202ENST00000422252 UGGT2Q9NYU1 1516 aa43.28■■■■■ 4.52
SMDT1-202ENST00000422252 ABCC10Q5T3U5 1492 aa43.25■■■■■ 4.51
SMDT1-202ENST00000422252 PRXQ9BXM0 1461 aa43.23■■■■■ 4.51
SMDT1-202ENST00000422252 FAM69CQ0P6D2 419 aa43.2■■■■■ 4.51
SMDT1-202ENST00000422252 CTTNBP2Q8WZ74 1663 aa43.16■■■■■ 4.5
SMDT1-202ENST00000422252 DIP2BQ9P265 1576 aa43.14■■■■■ 4.5
SMDT1-202ENST00000422252 ABCC2Q92887 1545 aa43.13■■■■■ 4.5
SMDT1-202ENST00000422252 KIAA0556O60303 1618 aa43.13■■■■■ 4.49
SMDT1-202ENST00000422252 UHRF1BP1LA0JNW5 1464 aa43.11■■■■■ 4.49
SMDT1-202ENST00000422252 UACAQ9BZF9 1416 aa43.1■■■■■ 4.49
SMDT1-202ENST00000422252 CSRNP3Q8WYN3 585 aa43■■■■■ 4.47
SMDT1-202ENST00000422252 GOLGA3Q08378 1498 aa42.98■■■■■ 4.47
SMDT1-202ENST00000422252 ASXL2Q76L83 1435 aa42.93■■■■■ 4.46
SMDT1-202ENST00000422252 EEA1Q15075 1411 aa42.91■■■■■ 4.46
SMDT1-202ENST00000422252 PLB1Q6P1J6 1458 aa42.91■■■■■ 4.46
SMDT1-202ENST00000422252 KDM5BQ9UGL1 1544 aa42.9■■■■■ 4.46
SMDT1-202ENST00000422252 ZCCHC11Q5TAX3 1644 aaKnown RBP42.79■■■■■ 4.44
SMDT1-202ENST00000422252 TSPOAP1O95153 1857 aa42.78■■■■■ 4.44
SMDT1-202ENST00000422252 GLI2P10070 1586 aa42.76■■■■■ 4.44
SMDT1-202ENST00000422252 ABCA8O94911 1581 aa42.71■■■■■ 4.43
SMDT1-202ENST00000422252 FAM9AQ8IZU1 332 aaPredicted RBP42.69■■■■■ 4.42
SMDT1-202ENST00000422252 EPRSP07814 1512 aaKnown RBP42.67■■■■■ 4.42
SMDT1-202ENST00000422252 KDM6BO15054 1643 aa42.65■■■■■ 4.42
SMDT1-202ENST00000422252 P3H3Q8IVL6 736 aa42.62■■■■■ 4.41
SMDT1-202ENST00000422252 CHIC1Q5VXU3 224 aa42.59■■■■■ 4.41
SMDT1-202ENST00000422252 WDR7Q9Y4E6 1490 aa42.59■■■■■ 4.41
SMDT1-202ENST00000422252 SAMD9Q5K651 1589 aa42.59■■■■■ 4.41
SMDT1-202ENST00000422252 PPRC1Q5VV67 1664 aaKnown RBP42.57■■■■■ 4.4
SMDT1-202ENST00000422252 AEBP2Q6ZN18 517 aaPredicted RBP42.56■■■■■ 4.4
SMDT1-202ENST00000422252 MAP3K4Q9Y6R4 1608 aa42.53■■■■■ 4.4
SMDT1-202ENST00000422252 KIF21BO75037 1637 aa42.52■■■■■ 4.4
SMDT1-202ENST00000422252 RANGAP1P46060 587 aaPredicted RBP42.42■■■■■ 4.38
SMDT1-202ENST00000422252 TEX14Q8IWB6 1497 aa42.41■■■■■ 4.38
SMDT1-202ENST00000422252 KCNH8Q96L42 1107 aa42.37■■■■■ 4.37
SMDT1-202ENST00000422252 ATP10BO94823 1461 aa42.36■■■■■ 4.37
SMDT1-202ENST00000422252 ARID3CA6NKF2 412 aa42.36■■■■■ 4.37
SMDT1-202ENST00000422252 RAPGEF6Q8TEU7 1601 aa42.34■■■■■ 4.37
SMDT1-202ENST00000422252 FHOD3Q2V2M9 1422 aa42.32■■■■■ 4.37
SMDT1-202ENST00000422252 CD109Q6YHK3 1445 aa42.29■■■■■ 4.36
SMDT1-202ENST00000422252 CFAP43Q8NDM7 1665 aa42.28■■■■■ 4.36
SMDT1-202ENST00000422252 COL17A1Q9UMD9 1497 aaPredicted RBP42.26■■■■■ 4.36
SMDT1-202ENST00000422252 EFCAB5A4FU69 1503 aa42.25■■■■■ 4.35
SMDT1-202ENST00000422252 MAGI3Q5TCQ9 1506 aa42.23■■■■■ 4.35
SMDT1-202ENST00000422252 UBTFP17480 764 aaKnown RBP42.2■■■■■ 4.35
SMDT1-202ENST00000422252 EHMT2Q96KQ7 1210 aa42.2■■■■■ 4.35
SMDT1-202ENST00000422252 NUP153P49790 1475 aaKnown RBP42.19■■■■■ 4.34
SMDT1-202ENST00000422252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.15■■■■■ 4.34
SMDT1-202ENST00000422252 HNRNPUL2Q1KMD3 747 aaKnown RBP42.15■■■■■ 4.34
SMDT1-202ENST00000422252 ABCA9Q8IUA7 1624 aa42.05■■■■■ 4.32
SMDT1-202ENST00000422252 KDM4FA0A1W2PPD8 638 aa42.04■■■■■ 4.32
SMDT1-202ENST00000422252 ARHGAP35Q9NRY4 1499 aa41.94■■■■■ 4.3
SMDT1-202ENST00000422252 PLEKHD1A6NEE1 506 aa41.94■■■■■ 4.3
SMDT1-202ENST00000422252 ARAP3Q8WWN8 1544 aa41.9■■■■■ 4.3
SMDT1-202ENST00000422252 FMN1Q68DA7 1419 aa41.89■■■■■ 4.3
SMDT1-202ENST00000422252 PHLDB1Q86UU1 1377 aa41.87■■■■■ 4.29
SMDT1-202ENST00000422252 CDK13Q14004 1512 aaKnown RBP41.81■■■■■ 4.28
SMDT1-202ENST00000422252 ADGRL1O94910 1474 aa41.81■■■■■ 4.28
SMDT1-202ENST00000422252 NEO1Q92859 1461 aa41.8■■■■■ 4.28
SMDT1-202ENST00000422252 HECW1Q76N89 1606 aa41.77■■■■■ 4.28
SMDT1-202ENST00000422252 ATP1B4Q9UN42 357 aaPredicted RBP41.75■■■■■ 4.27
SMDT1-202ENST00000422252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.72■■■■■ 4.272e-11■□□□□ 11
SMDT1-202ENST00000422252 RAPGEF3O95398 923 aa41.65■■■■■ 4.26
SMDT1-202ENST00000422252 TTC37Q6PGP7 1564 aa41.65■■■■■ 4.26
SMDT1-202ENST00000422252 CDK11AQ9UQ88 783 aaPredicted RBP41.6■■■■■ 4.25
SMDT1-202ENST00000422252 FANCAO15360 1455 aa41.6■■■■■ 4.25
SMDT1-202ENST00000422252 AKNAQ7Z591 1439 aa41.57■■■■■ 4.25
SMDT1-202ENST00000422252 CFAP74Q9C0B2 1584 aa41.57■■■■■ 4.25
SMDT1-202ENST00000422252 FRMPD1Q5SYB0 1578 aa41.54■■■■■ 4.24
SMDT1-202ENST00000422252 DENND4BO75064 1496 aaPredicted RBP41.51■■■■■ 4.24
SMDT1-202ENST00000422252 PLCH2O75038 1416 aa41.48■■■■■ 4.23
SMDT1-202ENST00000422252 CASKIN1Q8WXD9 1431 aa41.48■■■■■ 4.23
SMDT1-202ENST00000422252 LRRIQ1Q96JM4 1722 aa41.47■■■■■ 4.23
SMDT1-202ENST00000422252 TROQ12816 1431 aaPredicted RBP41.46■■■■■ 4.23
SMDT1-202ENST00000422252 PCF11O94913 1555 aaKnown RBP41.46■■■■■ 4.23
SMDT1-202ENST00000422252 CLIP1P30622 1438 aa41.44■■■■■ 4.23
SMDT1-202ENST00000422252 RICTORQ6R327 1708 aa41.42■■■■■ 4.22
SMDT1-202ENST00000422252 KIF14Q15058 1648 aa41.42■■■■■ 4.22
SMDT1-202ENST00000422252 CCDC18Q5T9S5 1454 aa41.4■■■■■ 4.22
SMDT1-202ENST00000422252 MYO5CQ9NQX4 1742 aa41.37■■■■■ 4.21
SMDT1-202ENST00000422252 FYCO1Q9BQS8 1478 aa41.34■■■■■ 4.21
SMDT1-202ENST00000422252 EFCAB2Q5VUJ9 269 aa41.32■■■■■ 4.21
SMDT1-202ENST00000422252 ARHGEF40Q8TER5 1519 aa41.32■■■■■ 4.2
SMDT1-202ENST00000422252 SCAPERQ9BY12 1400 aa41.31■■■■■ 4.2
SMDT1-202ENST00000422252 ZMYM4Q5VZL5 1548 aa41.3■■■■■ 4.2
SMDT1-202ENST00000422252 POGZQ7Z3K3 1410 aa41.26■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms