RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
NF1-203ENST00000422121 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
NF1-203ENST00000422121 NUP160Q12769 1436 aa17.03■□□□□ 0.32
NF1-203ENST00000422121 CEP170Q5SW79 1584 aa17.02■□□□□ 0.31
NF1-203ENST00000422121 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
NF1-203ENST00000422121 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
NF1-203ENST00000422121 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
NF1-203ENST00000422121 ERCC6L2Q5T890 1561 aa16.93■□□□□ 0.3
NF1-203ENST00000422121 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
NF1-203ENST00000422121 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
NF1-203ENST00000422121 CUL7Q14999 1698 aa16.89■□□□□ 0.29
NF1-203ENST00000422121 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
NF1-203ENST00000422121 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
NF1-203ENST00000422121 PRG4Q92954 1404 aaPredicted RBP16.82■□□□□ 0.28
NF1-203ENST00000422121 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
NF1-203ENST00000422121 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
NF1-203ENST00000422121 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
NF1-203ENST00000422121 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
NF1-203ENST00000422121 KCNA4P22459 653 aa16.71■□□□□ 0.27
NF1-203ENST00000422121 IQGAP2Q13576 1575 aa16.67■□□□□ 0.26
NF1-203ENST00000422121 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
NF1-203ENST00000422121 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
NF1-203ENST00000422121 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
NF1-203ENST00000422121 EEA1Q15075 1411 aa16.62■□□□□ 0.25
NF1-203ENST00000422121 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
NF1-203ENST00000422121 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
NF1-203ENST00000422121 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
NF1-203ENST00000422121 PTPRGP23470 1445 aa16.6■□□□□ 0.25
NF1-203ENST00000422121 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
NF1-203ENST00000422121 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
NF1-203ENST00000422121 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
NF1-203ENST00000422121 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
NF1-203ENST00000422121 KIAA0556O60303 1618 aa16.53■□□□□ 0.24
NF1-203ENST00000422121 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
NF1-203ENST00000422121 KIF21BO75037 1637 aa16.48■□□□□ 0.23
NF1-203ENST00000422121 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
NF1-203ENST00000422121 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
NF1-203ENST00000422121 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
NF1-203ENST00000422121 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
NF1-203ENST00000422121 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
NF1-203ENST00000422121 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
NF1-203ENST00000422121 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
NF1-203ENST00000422121 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
NF1-203ENST00000422121 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
NF1-203ENST00000422121 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
NF1-203ENST00000422121 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
NF1-203ENST00000422121 KIF13AQ9H1H9 1805 aa16.41■□□□□ 0.22
NF1-203ENST00000422121 KDM5BQ9UGL1 1544 aa16.4■□□□□ 0.22
NF1-203ENST00000422121 ABCA8O94911 1581 aa16.4■□□□□ 0.22
NF1-203ENST00000422121 FAM69CQ0P6D2 419 aa16.4■□□□□ 0.22
NF1-203ENST00000422121 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
NF1-203ENST00000422121 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
NF1-203ENST00000422121 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
NF1-203ENST00000422121 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
NF1-203ENST00000422121 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
NF1-203ENST00000422121 FHOD3Q2V2M9 1422 aa16.34■□□□□ 0.21
NF1-203ENST00000422121 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
NF1-203ENST00000422121 ATP10BO94823 1461 aa16.29■□□□□ 0.2
NF1-203ENST00000422121 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
NF1-203ENST00000422121 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
NF1-203ENST00000422121 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
NF1-203ENST00000422121 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
NF1-203ENST00000422121 GLI2P10070 1586 aa16.27■□□□□ 0.2
NF1-203ENST00000422121 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
NF1-203ENST00000422121 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
NF1-203ENST00000422121 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
NF1-203ENST00000422121 RAPGEF6Q8TEU7 1601 aa16.24■□□□□ 0.19
NF1-203ENST00000422121 PPRC1Q5VV67 1664 aaKnown RBP16.21■□□□□ 0.19
NF1-203ENST00000422121 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
NF1-203ENST00000422121 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
NF1-203ENST00000422121 MAP3K4Q9Y6R4 1608 aa16.18■□□□□ 0.18
NF1-203ENST00000422121 COL17A1Q9UMD9 1497 aaPredicted RBP16.15■□□□□ 0.18
NF1-203ENST00000422121 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
NF1-203ENST00000422121 FMN1Q68DA7 1419 aa16.13■□□□□ 0.17
NF1-203ENST00000422121 CD109Q6YHK3 1445 aa16.12■□□□□ 0.17
NF1-203ENST00000422121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
NF1-203ENST00000422121 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
NF1-203ENST00000422121 CDK13Q14004 1512 aaKnown RBP16.11■□□□□ 0.17
NF1-203ENST00000422121 CLIP1P30622 1438 aa16.11■□□□□ 0.17
NF1-203ENST00000422121 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
NF1-203ENST00000422121 PLEKHD1A6NEE1 506 aa16.09■□□□□ 0.17
NF1-203ENST00000422121 KDM6BO15054 1643 aa16.08■□□□□ 0.16
NF1-203ENST00000422121 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
NF1-203ENST00000422121 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
NF1-203ENST00000422121 ATP1B4Q9UN42 357 aaPredicted RBP16.07■□□□□ 0.16
NF1-203ENST00000422121 ABCA9Q8IUA7 1624 aa16.07■□□□□ 0.16
NF1-203ENST00000422121 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
NF1-203ENST00000422121 TEX14Q8IWB6 1497 aa16.05■□□□□ 0.16
NF1-203ENST00000422121 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
NF1-203ENST00000422121 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
NF1-203ENST00000422121 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
NF1-203ENST00000422121 CEP162Q5TB80 1403 aa16.02■□□□□ 0.16
NF1-203ENST00000422121 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
NF1-203ENST00000422121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.02■□□□□ 0.15
NF1-203ENST00000422121 TTC37Q6PGP7 1564 aa15.97■□□□□ 0.15
NF1-203ENST00000422121 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
NF1-203ENST00000422121 ARAP3Q8WWN8 1544 aa15.97■□□□□ 0.15
NF1-203ENST00000422121 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
NF1-203ENST00000422121 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
NF1-203ENST00000422121 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms