RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 EEA1Q15075 1411 aa26.19■■□□□ 1.78
BRAT1-202ENST00000421712 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
BRAT1-202ENST00000421712 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
BRAT1-202ENST00000421712 KIAA0586Q9BVV6 1533 aa26.09■■□□□ 1.77
BRAT1-202ENST00000421712 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
BRAT1-202ENST00000421712 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
BRAT1-202ENST00000421712 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
BRAT1-202ENST00000421712 ARAP1Q96P48 1450 aa26■■□□□ 1.75
BRAT1-202ENST00000421712 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
BRAT1-202ENST00000421712 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
BRAT1-202ENST00000421712 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
BRAT1-202ENST00000421712 CTTNBP2Q8WZ74 1663 aa25.89■■□□□ 1.73
BRAT1-202ENST00000421712 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
BRAT1-202ENST00000421712 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
BRAT1-202ENST00000421712 KIF21BO75037 1637 aa25.86■■□□□ 1.73
BRAT1-202ENST00000421712 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
BRAT1-202ENST00000421712 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
BRAT1-202ENST00000421712 UGGT2Q9NYU1 1516 aa25.8■■□□□ 1.72
BRAT1-202ENST00000421712 GOLGA3Q08378 1498 aa25.78■■□□□ 1.72
BRAT1-202ENST00000421712 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
BRAT1-202ENST00000421712 PTPRGP23470 1445 aa25.76■■□□□ 1.71
BRAT1-202ENST00000421712 DISP1Q96F81 1524 aa25.75■■□□□ 1.71
BRAT1-202ENST00000421712 P3H3Q8IVL6 736 aa25.72■■□□□ 1.71
BRAT1-202ENST00000421712 KIAA0556O60303 1618 aa25.7■■□□□ 1.7
BRAT1-202ENST00000421712 NPM1P06748 294 aaKnown RBP eCLIP25.65■■□□□ 1.7
BRAT1-202ENST00000421712 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
BRAT1-202ENST00000421712 UACAQ9BZF9 1416 aa25.55■■□□□ 1.68
BRAT1-202ENST00000421712 ADCY10Q96PN6 1610 aa25.55■■□□□ 1.68
BRAT1-202ENST00000421712 SAMD9Q5K651 1589 aa25.53■■□□□ 1.68
BRAT1-202ENST00000421712 FHOD3Q2V2M9 1422 aa25.5■■□□□ 1.67
BRAT1-202ENST00000421712 EFCAB5A4FU69 1503 aa25.49■■□□□ 1.67
BRAT1-202ENST00000421712 LOC105371045A0A1W2PR82 267 aa25.48■■□□□ 1.67
BRAT1-202ENST00000421712 PLB1Q6P1J6 1458 aa25.47■■□□□ 1.67
BRAT1-202ENST00000421712 UHRF1BP1LA0JNW5 1464 aa25.47■■□□□ 1.67
BRAT1-202ENST00000421712 ABCC2Q92887 1545 aa25.46■■□□□ 1.67
BRAT1-202ENST00000421712 ARID3CA6NKF2 412 aa25.4■■□□□ 1.66
BRAT1-202ENST00000421712 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
BRAT1-202ENST00000421712 ABCA8O94911 1581 aa25.39■■□□□ 1.66
BRAT1-202ENST00000421712 ATP1B4Q9UN42 357 aaPredicted RBP25.35■■□□□ 1.65
BRAT1-202ENST00000421712 CLIP1P30622 1438 aa25.35■■□□□ 1.65
BRAT1-202ENST00000421712 KDM5BQ9UGL1 1544 aa25.34■■□□□ 1.65
BRAT1-202ENST00000421712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.34■■□□□ 1.65
BRAT1-202ENST00000421712 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
BRAT1-202ENST00000421712 MAPKBP1O60336 1514 aa25.33■■□□□ 1.65
BRAT1-202ENST00000421712 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
BRAT1-202ENST00000421712 ZCCHC11Q5TAX3 1644 aaKnown RBP25.31■■□□□ 1.64
BRAT1-202ENST00000421712 FAM69CQ0P6D2 419 aa25.31■■□□□ 1.64
BRAT1-202ENST00000421712 FMN1Q68DA7 1419 aa25.3■■□□□ 1.64
BRAT1-202ENST00000421712 ASXL2Q76L83 1435 aa25.3■■□□□ 1.64
BRAT1-202ENST00000421712 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
BRAT1-202ENST00000421712 ATP10BO94823 1461 aa25.25■■□□□ 1.63
BRAT1-202ENST00000421712 ABCC10Q5T3U5 1492 aa25.25■■□□□ 1.63
BRAT1-202ENST00000421712 KCNH8Q96L42 1107 aa25.22■■□□□ 1.63
BRAT1-202ENST00000421712 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
BRAT1-202ENST00000421712 KIF13AQ9H1H9 1805 aa25.18■■□□□ 1.62
BRAT1-202ENST00000421712 DIP2BQ9P265 1576 aa25.18■■□□□ 1.62
BRAT1-202ENST00000421712 WDR7Q9Y4E6 1490 aa25.17■■□□□ 1.62
BRAT1-202ENST00000421712 PLEKHD1A6NEE1 506 aa25.15■■□□□ 1.62
BRAT1-202ENST00000421712 HECW1Q76N89 1606 aa25.14■■□□□ 1.61
BRAT1-202ENST00000421712 EPRSP07814 1512 aaKnown RBP25.12■■□□□ 1.61
BRAT1-202ENST00000421712 CASKIN1Q8WXD9 1431 aa25.1■■□□□ 1.61
BRAT1-202ENST00000421712 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
BRAT1-202ENST00000421712 CDK11AQ9UQ88 783 aaPredicted RBP25.08■■□□□ 1.61
BRAT1-202ENST00000421712 TSPOAP1O95153 1857 aa25.07■■□□□ 1.6
BRAT1-202ENST00000421712 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
BRAT1-202ENST00000421712 GLI2P10070 1586 aa25.05■■□□□ 1.6
BRAT1-202ENST00000421712 FYCO1Q9BQS8 1478 aa25.02■■□□□ 1.6
BRAT1-202ENST00000421712 CCDC18Q5T9S5 1454 aa24.98■■□□□ 1.59
BRAT1-202ENST00000421712 CD109Q6YHK3 1445 aa24.98■■□□□ 1.59
BRAT1-202ENST00000421712 LRRIQ1Q96JM4 1722 aa24.96■■□□□ 1.59
BRAT1-202ENST00000421712 MAP3K4Q9Y6R4 1608 aa24.95■■□□□ 1.58
BRAT1-202ENST00000421712 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
BRAT1-202ENST00000421712 CFAP43Q8NDM7 1665 aa24.92■■□□□ 1.58
BRAT1-202ENST00000421712 TEX14Q8IWB6 1497 aa24.9■■□□□ 1.58
BRAT1-202ENST00000421712 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.58
BRAT1-202ENST00000421712 ABCA9Q8IUA7 1624 aa24.88■■□□□ 1.57
BRAT1-202ENST00000421712 PPRC1Q5VV67 1664 aaKnown RBP24.87■■□□□ 1.57
BRAT1-202ENST00000421712 MAGI3Q5TCQ9 1506 aa24.85■■□□□ 1.57
BRAT1-202ENST00000421712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.84■■□□□ 1.57
BRAT1-202ENST00000421712 MTUS2Q5JR59 1369 aa24.82■■□□□ 1.56
BRAT1-202ENST00000421712 APLP2Q06481 763 aa24.82■■□□□ 1.56
BRAT1-202ENST00000421712 KIF14Q15058 1648 aa24.82■■□□□ 1.56
BRAT1-202ENST00000421712 TTC37Q6PGP7 1564 aa24.79■■□□□ 1.56
BRAT1-202ENST00000421712 KDM6BO15054 1643 aa24.79■■□□□ 1.56
BRAT1-202ENST00000421712 PLCH2O75038 1416 aa24.72■■□□□ 1.55
BRAT1-202ENST00000421712 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
BRAT1-202ENST00000421712 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
BRAT1-202ENST00000421712 TIAM1Q13009 1591 aa24.71■■□□□ 1.55
BRAT1-202ENST00000421712 FANCAO15360 1455 aa24.7■■□□□ 1.55
BRAT1-202ENST00000421712 NEO1Q92859 1461 aa24.7■■□□□ 1.54
BRAT1-202ENST00000421712 MYO5CQ9NQX4 1742 aa24.69■■□□□ 1.54
BRAT1-202ENST00000421712 COL17A1Q9UMD9 1497 aaPredicted RBP24.69■■□□□ 1.54
BRAT1-202ENST00000421712 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
BRAT1-202ENST00000421712 AKNAQ7Z591 1439 aa24.67■■□□□ 1.54
BRAT1-202ENST00000421712 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
BRAT1-202ENST00000421712 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
BRAT1-202ENST00000421712 CFAP74Q9C0B2 1584 aa24.65■■□□□ 1.54
BRAT1-202ENST00000421712 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
BRAT1-202ENST00000421712 MAP3K1Q13233 1512 aa24.64■■□□□ 1.53
BRAT1-202ENST00000421712 RAPGEF3O95398 923 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms