RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 MAPKBP1O60336 1514 aa10.8□□□□□ -0.68
HDAC8-212ENST00000421523 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
HDAC8-212ENST00000421523 GRIN2AQ12879 1464 aa10.79□□□□□ -0.68
HDAC8-212ENST00000421523 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDAC8-212ENST00000421523 PHF23Q9BUL5 403 aaPredicted RBP10.78□□□□□ -0.68
HDAC8-212ENST00000421523 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
HDAC8-212ENST00000421523 NUP160Q12769 1436 aa10.75□□□□□ -0.69
HDAC8-212ENST00000421523 PRG4Q92954 1404 aaPredicted RBP10.75□□□□□ -0.69
HDAC8-212ENST00000421523 CUX1P39880 1505 aa10.74□□□□□ -0.69
HDAC8-212ENST00000421523 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
HDAC8-212ENST00000421523 ADCY10Q96PN6 1610 aa10.73□□□□□ -0.69
HDAC8-212ENST00000421523 ADAMTS12P58397 1594 aa10.72□□□□□ -0.69
HDAC8-212ENST00000421523 PPRC1Q5VV67 1664 aaKnown RBP10.67□□□□□ -0.7
HDAC8-212ENST00000421523 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.7
HDAC8-212ENST00000421523 COL17A1Q9UMD9 1497 aaPredicted RBP10.65□□□□□ -0.7
HDAC8-212ENST00000421523 TOP2BQ02880 1626 aa10.65□□□□□ -0.7
HDAC8-212ENST00000421523 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
HDAC8-212ENST00000421523 SPATA31D1Q6ZQQ2 1576 aa10.62□□□□□ -0.71
HDAC8-212ENST00000421523 FHAD1B1AJZ9 1412 aa10.61□□□□□ -0.71
HDAC8-212ENST00000421523 RUSC2Q8N2Y8 1516 aa10.59□□□□□ -0.71
HDAC8-212ENST00000421523 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
HDAC8-212ENST00000421523 ASXL2Q76L83 1435 aa10.56□□□□□ -0.72
HDAC8-212ENST00000421523 GLI2P10070 1586 aa10.56□□□□□ -0.72
HDAC8-212ENST00000421523 KIF21BO75037 1637 aa10.55□□□□□ -0.72
HDAC8-212ENST00000421523 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
HDAC8-212ENST00000421523 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
HDAC8-212ENST00000421523 MAP3K4Q9Y6R4 1608 aa10.52□□□□□ -0.73
HDAC8-212ENST00000421523 PLB1Q6P1J6 1458 aa10.52□□□□□ -0.73
HDAC8-212ENST00000421523 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
HDAC8-212ENST00000421523 CUL7Q14999 1698 aa10.5□□□□□ -0.73
HDAC8-212ENST00000421523 PTPRMP28827 1452 aa10.5□□□□□ -0.73
HDAC8-212ENST00000421523 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
HDAC8-212ENST00000421523 ABCC2Q92887 1545 aa10.5□□□□□ -0.73
HDAC8-212ENST00000421523 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
HDAC8-212ENST00000421523 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
HDAC8-212ENST00000421523 HSPA2P54652 639 aa10.46□□□□□ -0.73
HDAC8-212ENST00000421523 PTPRGP23470 1445 aa10.46□□□□□ -0.74
HDAC8-212ENST00000421523 ADAMTSL3P82987 1691 aa10.43□□□□□ -0.74
HDAC8-212ENST00000421523 MADDQ8WXG6 1647 aa10.41□□□□□ -0.74
HDAC8-212ENST00000421523 KIAA0586Q9BVV6 1533 aa10.41□□□□□ -0.74
HDAC8-212ENST00000421523 PLPPR3Q6T4P5 718 aa10.4□□□□□ -0.74
HDAC8-212ENST00000421523 ZCCHC11Q5TAX3 1644 aaKnown RBP10.37□□□□□ -0.75
HDAC8-212ENST00000421523 TNIKQ9UKE5 1360 aa10.37□□□□□ -0.75
HDAC8-212ENST00000421523 UHRF1BP1LA0JNW5 1464 aa10.36□□□□□ -0.75
HDAC8-212ENST00000421523 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
HDAC8-212ENST00000421523 UACAQ9BZF9 1416 aa10.35□□□□□ -0.75
HDAC8-212ENST00000421523 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
HDAC8-212ENST00000421523 BCORL1Q5H9F3 1711 aa10.35□□□□□ -0.75
HDAC8-212ENST00000421523 ARID4BQ4LE39 1312 aaPredicted RBP10.34□□□□□ -0.75
HDAC8-212ENST00000421523 KDM5BQ9UGL1 1544 aa10.34□□□□□ -0.75
HDAC8-212ENST00000421523 WDR7Q9Y4E6 1490 aa10.34□□□□□ -0.75
HDAC8-212ENST00000421523 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
HDAC8-212ENST00000421523 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
HDAC8-212ENST00000421523 MAGI3Q5TCQ9 1506 aa10.33□□□□□ -0.76
HDAC8-212ENST00000421523 CFAP43Q8NDM7 1665 aa10.31□□□□□ -0.76
HDAC8-212ENST00000421523 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
HDAC8-212ENST00000421523 ARAP3Q8WWN8 1544 aa10.27□□□□□ -0.77
HDAC8-212ENST00000421523 RAPGEF3O95398 923 aa10.25□□□□□ -0.77
HDAC8-212ENST00000421523 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
HDAC8-212ENST00000421523 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
HDAC8-212ENST00000421523 FOXD1Q16676 465 aa10.23□□□□□ -0.77
HDAC8-212ENST00000421523 YEATS2Q9ULM3 1422 aa10.21□□□□□ -0.78
HDAC8-212ENST00000421523 STRCQ7RTU9 1775 aa10.21□□□□□ -0.78
HDAC8-212ENST00000421523 MED1Q15648 1581 aaPredicted RBP10.2□□□□□ -0.78
HDAC8-212ENST00000421523 FRMPD1Q5SYB0 1578 aa10.2□□□□□ -0.78
HDAC8-212ENST00000421523 ARHGEF40Q8TER5 1519 aa10.19□□□□□ -0.78
HDAC8-212ENST00000421523 IGF1RP08069 1367 aa10.19□□□□□ -0.78
HDAC8-212ENST00000421523 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
HDAC8-212ENST00000421523 PREX1Q8TCU6 1659 aa10.18□□□□□ -0.78
HDAC8-212ENST00000421523 FER1L4A9Z1Z3 1794 aa10.17□□□□□ -0.78
HDAC8-212ENST00000421523 MLECQ14165 292 aa10.17□□□□□ -0.78
HDAC8-212ENST00000421523 KIAA0556O60303 1618 aa10.17□□□□□ -0.78
HDAC8-212ENST00000421523 LTBP4Q8N2S1 1624 aa10.17□□□□□ -0.78
HDAC8-212ENST00000421523 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.78
HDAC8-212ENST00000421523 UBAP1LF5GYI3 381 aa10.15□□□□□ -0.78
HDAC8-212ENST00000421523 SIGLEC1Q9BZZ2 1709 aa10.15□□□□□ -0.78
HDAC8-212ENST00000421523 FANCAO15360 1455 aa10.15□□□□□ -0.78
HDAC8-212ENST00000421523 POGZQ7Z3K3 1410 aa10.15□□□□□ -0.79
HDAC8-212ENST00000421523 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
HDAC8-212ENST00000421523 IQSEC2Q5JU85 1478 aa10.14□□□□□ -0.79
HDAC8-212ENST00000421523 KIF27Q86VH2 1401 aa10.13□□□□□ -0.79
HDAC8-212ENST00000421523 CARMIL1Q5VZK9 1371 aa10.13□□□□□ -0.79
HDAC8-212ENST00000421523 PHLDB1Q86UU1 1377 aa10.12□□□□□ -0.79
HDAC8-212ENST00000421523 UGGT2Q9NYU1 1516 aa10.12□□□□□ -0.79
HDAC8-212ENST00000421523 PTPRTO14522 1441 aa10.11□□□□□ -0.79
HDAC8-212ENST00000421523 CEBPAP49715 358 aaPredicted RBP10.11□□□□□ -0.79
HDAC8-212ENST00000421523 ABCA9Q8IUA7 1624 aa10.11□□□□□ -0.79
HDAC8-212ENST00000421523 NEO1Q92859 1461 aa10.1□□□□□ -0.79
HDAC8-212ENST00000421523 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
HDAC8-212ENST00000421523 UHRF1BP1Q6BDS2 1440 aa10.1□□□□□ -0.79
HDAC8-212ENST00000421523 ABCA8O94911 1581 aa10.09□□□□□ -0.79
HDAC8-212ENST00000421523 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
HDAC8-212ENST00000421523 AKNAQ7Z591 1439 aa10.09□□□□□ -0.79
HDAC8-212ENST00000421523 HSPA1LP34931 641 aa10.08□□□□□ -0.8
HDAC8-212ENST00000421523 RICTORQ6R327 1708 aa10.07□□□□□ -0.8
HDAC8-212ENST00000421523 ZFYVE16Q7Z3T8 1539 aa10.07□□□□□ -0.8
HDAC8-212ENST00000421523 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
HDAC8-212ENST00000421523 DENND4BO75064 1496 aaPredicted RBP10.05□□□□□ -0.8
HDAC8-212ENST00000421523 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
HDAC8-212ENST00000421523 ARHGEF12Q9NZN5 1544 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms