RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
BDNF-209ENST00000420794 VPS8Q8N3P4 1428 aa11.16□□□□□ -0.62
BDNF-209ENST00000420794 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
BDNF-209ENST00000420794 CUL7Q14999 1698 aa11.16□□□□□ -0.62
BDNF-209ENST00000420794 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
BDNF-209ENST00000420794 MAGI1Q96QZ7 1491 aaPredicted RBP11.13□□□□□ -0.63
BDNF-209ENST00000420794 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
BDNF-209ENST00000420794 MYT1Q01538 1121 aa11.12□□□□□ -0.63
BDNF-209ENST00000420794 ITGAEP38570 1179 aa11.11□□□□□ -0.63
BDNF-209ENST00000420794 MTUS2Q5JR59 1369 aa11.11□□□□□ -0.63
BDNF-209ENST00000420794 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
BDNF-209ENST00000420794 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
BDNF-209ENST00000420794 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
BDNF-209ENST00000420794 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
BDNF-209ENST00000420794 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
BDNF-209ENST00000420794 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
BDNF-209ENST00000420794 TARBP1Q13395 1621 aaKnown RBP11.08□□□□□ -0.64
BDNF-209ENST00000420794 WDR97A6NE52 1622 aa11.08□□□□□ -0.64
BDNF-209ENST00000420794 GRIN2AQ12879 1464 aa11.07□□□□□ -0.64
BDNF-209ENST00000420794 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
BDNF-209ENST00000420794 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
BDNF-209ENST00000420794 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
BDNF-209ENST00000420794 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
BDNF-209ENST00000420794 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
BDNF-209ENST00000420794 EFCAB5A4FU69 1503 aa11.03□□□□□ -0.64
BDNF-209ENST00000420794 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
BDNF-209ENST00000420794 ZEB1P37275 1124 aaPredicted RBP11.01□□□□□ -0.65
BDNF-209ENST00000420794 ADAMTS12P58397 1594 aa11.01□□□□□ -0.65
BDNF-209ENST00000420794 PTPRGP23470 1445 aa11.01□□□□□ -0.65
BDNF-209ENST00000420794 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
BDNF-209ENST00000420794 ARAP1Q96P48 1450 aa11□□□□□ -0.65
BDNF-209ENST00000420794 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
BDNF-209ENST00000420794 PBRM1Q86U86 1689 aa10.99□□□□□ -0.65
BDNF-209ENST00000420794 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
BDNF-209ENST00000420794 PRG4Q92954 1404 aaPredicted RBP10.98□□□□□ -0.65
BDNF-209ENST00000420794 ZNF777Q9ULD5 760 aaPredicted RBP10.98□□□□□ -0.65
BDNF-209ENST00000420794 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
BDNF-209ENST00000420794 CASKIN1Q8WXD9 1431 aa10.95□□□□□ -0.66
BDNF-209ENST00000420794 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
BDNF-209ENST00000420794 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
BDNF-209ENST00000420794 CFDP1Q9UEE9 299 aaPredicted RBP10.91□□□□□ -0.66
BDNF-209ENST00000420794 NUP160Q12769 1436 aa10.91□□□□□ -0.66
BDNF-209ENST00000420794 CTTNBP2Q8WZ74 1663 aa10.91□□□□□ -0.66
BDNF-209ENST00000420794 CCNB3Q8WWL7 1395 aa10.91□□□□□ -0.66
BDNF-209ENST00000420794 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
BDNF-209ENST00000420794 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
BDNF-209ENST00000420794 TSPY4P0CV99 314 aa10.88□□□□□ -0.67
BDNF-209ENST00000420794 TSPY10P0CW01 314 aa10.88□□□□□ -0.67
BDNF-209ENST00000420794 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
BDNF-209ENST00000420794 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
BDNF-209ENST00000420794 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
BDNF-209ENST00000420794 HECW1Q76N89 1606 aa10.84□□□□□ -0.67
BDNF-209ENST00000420794 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
BDNF-209ENST00000420794 UACAQ9BZF9 1416 aa10.83□□□□□ -0.68
BDNF-209ENST00000420794 HRCP23327 699 aa10.83□□□□□ -0.68
BDNF-209ENST00000420794 CEP170Q5SW79 1584 aa10.83□□□□□ -0.68
BDNF-209ENST00000420794 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
BDNF-209ENST00000420794 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
BDNF-209ENST00000420794 MAP3K1Q13233 1512 aa10.82□□□□□ -0.68
BDNF-209ENST00000420794 KIAA0556O60303 1618 aa10.81□□□□□ -0.68
BDNF-209ENST00000420794 EPRSP07814 1512 aaKnown RBP10.81□□□□□ -0.68
BDNF-209ENST00000420794 PLB1Q6P1J6 1458 aa10.8□□□□□ -0.68
BDNF-209ENST00000420794 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
BDNF-209ENST00000420794 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
BDNF-209ENST00000420794 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
BDNF-209ENST00000420794 SAMD9Q5K651 1589 aa10.78□□□□□ -0.68
BDNF-209ENST00000420794 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.68
BDNF-209ENST00000420794 TROQ12816 1431 aaPredicted RBP10.77□□□□□ -0.69
BDNF-209ENST00000420794 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
BDNF-209ENST00000420794 NCOA2Q15596 1464 aa10.77□□□□□ -0.69
BDNF-209ENST00000420794 MYOM3Q5VTT5 1437 aa10.76□□□□□ -0.69
BDNF-209ENST00000420794 CHD1O14646 1710 aa10.76□□□□□ -0.69
BDNF-209ENST00000420794 PHLDB1Q86UU1 1377 aa10.76□□□□□ -0.69
BDNF-209ENST00000420794 CDK13Q14004 1512 aaKnown RBP10.75□□□□□ -0.69
BDNF-209ENST00000420794 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
BDNF-209ENST00000420794 FGD6Q6ZV73 1430 aa10.74□□□□□ -0.69
BDNF-209ENST00000420794 RAPGEF6Q8TEU7 1601 aa10.74□□□□□ -0.69
BDNF-209ENST00000420794 NUP153P49790 1475 aaKnown RBP10.72□□□□□ -0.69
BDNF-209ENST00000420794 RRBP1Q9P2E9 1410 aaKnown RBP10.71□□□□□ -0.69
BDNF-209ENST00000420794 SUPT6HQ7KZ85 1726 aaKnown RBP10.71□□□□□ -0.7
BDNF-209ENST00000420794 NEUROD1Q13562 356 aa10.7□□□□□ -0.7
BDNF-209ENST00000420794 MIA2Q96PC5 1412 aa10.7□□□□□ -0.7
BDNF-209ENST00000420794 SETD5Q9C0A6 1442 aa10.7□□□□□ -0.7
BDNF-209ENST00000420794 ATP10BO94823 1461 aa10.69□□□□□ -0.7
BDNF-209ENST00000420794 HNRNPMP52272 730 aaKnown RBP eCLIP10.69□□□□□ -0.7
BDNF-209ENST00000420794 ANKRD30AQ9BXX3 1397 aa10.68□□□□□ -0.7
BDNF-209ENST00000420794 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
BDNF-209ENST00000420794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
BDNF-209ENST00000420794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.66□□□□□ -0.7
BDNF-209ENST00000420794 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
BDNF-209ENST00000420794 ABCC2Q92887 1545 aa10.66□□□□□ -0.7
BDNF-209ENST00000420794 ZNF644Q9H582 1327 aaPredicted RBP10.66□□□□□ -0.7
BDNF-209ENST00000420794 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
BDNF-209ENST00000420794 CFAP43Q8NDM7 1665 aa10.64□□□□□ -0.71
BDNF-209ENST00000420794 KIF14Q15058 1648 aa10.64□□□□□ -0.71
BDNF-209ENST00000420794 CLSPNQ9HAW4 1339 aa10.64□□□□□ -0.71
BDNF-209ENST00000420794 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
BDNF-209ENST00000420794 SPAG9O60271 1321 aaKnown RBP10.64□□□□□ -0.71
BDNF-209ENST00000420794 ARHGAP5Q13017 1502 aa10.63□□□□□ -0.71
BDNF-209ENST00000420794 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms