RNA–Protein interactions for RNA: ENST00000420619.5

LDLRAD1-203, Transcript of low density lipoprotein receptor class A domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLRAD1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1-203ENST00000420619 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
LDLRAD1-203ENST00000420619 CLIP1P30622 1438 aa21.12■□□□□ 0.97
LDLRAD1-203ENST00000420619 CHD1O14646 1710 aa21.06■□□□□ 0.96
LDLRAD1-203ENST00000420619 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
LDLRAD1-203ENST00000420619 NUP160Q12769 1436 aa21.03■□□□□ 0.96
LDLRAD1-203ENST00000420619 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.95
LDLRAD1-203ENST00000420619 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
LDLRAD1-203ENST00000420619 IQGAP2Q13576 1575 aa20.99■□□□□ 0.95
LDLRAD1-203ENST00000420619 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
LDLRAD1-203ENST00000420619 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
LDLRAD1-203ENST00000420619 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
LDLRAD1-203ENST00000420619 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
LDLRAD1-203ENST00000420619 EFCAB5A4FU69 1503 aa20.9■□□□□ 0.94
LDLRAD1-203ENST00000420619 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
LDLRAD1-203ENST00000420619 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
LDLRAD1-203ENST00000420619 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
LDLRAD1-203ENST00000420619 DISP1Q96F81 1524 aa20.84■□□□□ 0.93
LDLRAD1-203ENST00000420619 CLASP1Q7Z460 1538 aa20.81■□□□□ 0.92
LDLRAD1-203ENST00000420619 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
LDLRAD1-203ENST00000420619 KIAA0556O60303 1618 aa20.79■□□□□ 0.92
LDLRAD1-203ENST00000420619 SHROOM2Q13796 1616 aa20.77■□□□□ 0.92
LDLRAD1-203ENST00000420619 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.91
LDLRAD1-203ENST00000420619 CARMIL2Q6F5E8 1435 aa20.74■□□□□ 0.91
LDLRAD1-203ENST00000420619 FMN1Q68DA7 1419 aa20.73■□□□□ 0.91
LDLRAD1-203ENST00000420619 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
LDLRAD1-203ENST00000420619 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
LDLRAD1-203ENST00000420619 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
LDLRAD1-203ENST00000420619 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
LDLRAD1-203ENST00000420619 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
LDLRAD1-203ENST00000420619 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
LDLRAD1-203ENST00000420619 APLP2Q06481 763 aa20.65■□□□□ 0.9
LDLRAD1-203ENST00000420619 FYCO1Q9BQS8 1478 aa20.64■□□□□ 0.89
LDLRAD1-203ENST00000420619 PTPRGP23470 1445 aa20.61■□□□□ 0.89
LDLRAD1-203ENST00000420619 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
LDLRAD1-203ENST00000420619 PLB1Q6P1J6 1458 aa20.58■□□□□ 0.89
LDLRAD1-203ENST00000420619 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
LDLRAD1-203ENST00000420619 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
LDLRAD1-203ENST00000420619 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
LDLRAD1-203ENST00000420619 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
LDLRAD1-203ENST00000420619 HECW1Q76N89 1606 aa20.53■□□□□ 0.88
LDLRAD1-203ENST00000420619 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
LDLRAD1-203ENST00000420619 ABCA8O94911 1581 aa20.52■□□□□ 0.88
LDLRAD1-203ENST00000420619 NUP153P49790 1475 aaKnown RBP20.52■□□□□ 0.88
LDLRAD1-203ENST00000420619 EPRSP07814 1512 aaKnown RBP20.51■□□□□ 0.87
LDLRAD1-203ENST00000420619 CFAP43Q8NDM7 1665 aa20.5■□□□□ 0.87
LDLRAD1-203ENST00000420619 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
LDLRAD1-203ENST00000420619 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
LDLRAD1-203ENST00000420619 UACAQ9BZF9 1416 aa20.47■□□□□ 0.87
LDLRAD1-203ENST00000420619 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
LDLRAD1-203ENST00000420619 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
LDLRAD1-203ENST00000420619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
LDLRAD1-203ENST00000420619 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
LDLRAD1-203ENST00000420619 ATP10BO94823 1461 aa20.42■□□□□ 0.86
LDLRAD1-203ENST00000420619 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
LDLRAD1-203ENST00000420619 MAGI3Q5TCQ9 1506 aa20.41■□□□□ 0.86
LDLRAD1-203ENST00000420619 ABCC2Q92887 1545 aa20.4■□□□□ 0.86
LDLRAD1-203ENST00000420619 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
LDLRAD1-203ENST00000420619 UHRF1BP1LA0JNW5 1464 aa20.38■□□□□ 0.85
LDLRAD1-203ENST00000420619 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
LDLRAD1-203ENST00000420619 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
LDLRAD1-203ENST00000420619 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
LDLRAD1-203ENST00000420619 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
LDLRAD1-203ENST00000420619 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
LDLRAD1-203ENST00000420619 ADCY10Q96PN6 1610 aa20.33■□□□□ 0.85
LDLRAD1-203ENST00000420619 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
LDLRAD1-203ENST00000420619 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
LDLRAD1-203ENST00000420619 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
LDLRAD1-203ENST00000420619 KDM5BQ9UGL1 1544 aa20.3■□□□□ 0.84
LDLRAD1-203ENST00000420619 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
LDLRAD1-203ENST00000420619 TROQ12816 1431 aaPredicted RBP20.28■□□□□ 0.84
LDLRAD1-203ENST00000420619 ZCCHC11Q5TAX3 1644 aaKnown RBP20.27■□□□□ 0.84
LDLRAD1-203ENST00000420619 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
LDLRAD1-203ENST00000420619 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
LDLRAD1-203ENST00000420619 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
LDLRAD1-203ENST00000420619 KIF14Q15058 1648 aa20.21■□□□□ 0.83
LDLRAD1-203ENST00000420619 CCNB3Q8WWL7 1395 aa20.17■□□□□ 0.82
LDLRAD1-203ENST00000420619 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
LDLRAD1-203ENST00000420619 MYOM3Q5VTT5 1437 aa20.17■□□□□ 0.82
LDLRAD1-203ENST00000420619 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
LDLRAD1-203ENST00000420619 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
LDLRAD1-203ENST00000420619 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
LDLRAD1-203ENST00000420619 ASXL2Q76L83 1435 aa20.12■□□□□ 0.81
LDLRAD1-203ENST00000420619 GPATCH8Q9UKJ3 1502 aaKnown RBP20.11■□□□□ 0.81
LDLRAD1-203ENST00000420619 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
LDLRAD1-203ENST00000420619 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
LDLRAD1-203ENST00000420619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.08■□□□□ 0.81
LDLRAD1-203ENST00000420619 MIA2Q96PC5 1412 aa20.07■□□□□ 0.8
LDLRAD1-203ENST00000420619 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
LDLRAD1-203ENST00000420619 PTPN23Q9H3S7 1636 aa20.06■□□□□ 0.8
LDLRAD1-203ENST00000420619 TTC37Q6PGP7 1564 aa20.05■□□□□ 0.8
LDLRAD1-203ENST00000420619 CFDP1Q9UEE9 299 aaPredicted RBP20.05■□□□□ 0.8
LDLRAD1-203ENST00000420619 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.05■□□□□ 0.8
LDLRAD1-203ENST00000420619 ITGAEP38570 1179 aa20.04■□□□□ 0.8
LDLRAD1-203ENST00000420619 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
LDLRAD1-203ENST00000420619 TCOF1Q13428 1488 aaKnown RBP20.03■□□□□ 0.8
LDLRAD1-203ENST00000420619 ITSN2Q9NZM3 1697 aa20.03■□□□□ 0.8
LDLRAD1-203ENST00000420619 DNAJC5Q9H3Z4 198 aa20.02■□□□□ 0.8
LDLRAD1-203ENST00000420619 CDC42BPBQ9Y5S2 1711 aa20.01■□□□□ 0.79
LDLRAD1-203ENST00000420619 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
LDLRAD1-203ENST00000420619 MAPKBP1O60336 1514 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms