RNA–Protein interactions for RNA: ENST00000420369.5

NR1H3-207, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-207ENST00000420369 FBLN2P98095 1184 aa30.6■■■□□ 2.49
NR1H3-207ENST00000420369 IQGAP2Q13576 1575 aa30.57■■■□□ 2.48
NR1H3-207ENST00000420369 NUP160Q12769 1436 aa30.56■■■□□ 2.48
NR1H3-207ENST00000420369 KIAA0586Q9BVV6 1533 aa30.49■■■□□ 2.47
NR1H3-207ENST00000420369 CEP162Q5TB80 1403 aa30.48■■■□□ 2.47
NR1H3-207ENST00000420369 EFCAB5A4FU69 1503 aa30.4■■■□□ 2.46
NR1H3-207ENST00000420369 CLASP1Q7Z460 1538 aa30.4■■■□□ 2.46
NR1H3-207ENST00000420369 CLIP1P30622 1438 aa30.39■■■□□ 2.46
NR1H3-207ENST00000420369 UGGT2Q9NYU1 1516 aa30.37■■■□□ 2.45
NR1H3-207ENST00000420369 SAMD9Q5K651 1589 aa30.37■■■□□ 2.45
NR1H3-207ENST00000420369 SHROOM2Q13796 1616 aa30.34■■■□□ 2.45
NR1H3-207ENST00000420369 ARHGAP35Q9NRY4 1499 aa30.28■■■□□ 2.44
NR1H3-207ENST00000420369 RANGAP1P46060 587 aaPredicted RBP30.28■■■□□ 2.44
NR1H3-207ENST00000420369 KIAA0556O60303 1618 aa30.26■■■□□ 2.44
NR1H3-207ENST00000420369 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
NR1H3-207ENST00000420369 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
NR1H3-207ENST00000420369 DISP1Q96F81 1524 aa30.18■■■□□ 2.42
NR1H3-207ENST00000420369 CARMIL2Q6F5E8 1435 aa30.15■■■□□ 2.42
NR1H3-207ENST00000420369 JPH4Q96JJ6 628 aa30.14■■■□□ 2.42
NR1H3-207ENST00000420369 FHOD3Q2V2M9 1422 aa30.13■■■□□ 2.41
NR1H3-207ENST00000420369 PRG4Q92954 1404 aaPredicted RBP30.1■■■□□ 2.41
NR1H3-207ENST00000420369 VPS8Q8N3P4 1428 aa30.07■■■□□ 2.4
NR1H3-207ENST00000420369 P3H3Q8IVL6 736 aa30.03■■■□□ 2.4
NR1H3-207ENST00000420369 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
NR1H3-207ENST00000420369 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
NR1H3-207ENST00000420369 PCF11O94913 1555 aaKnown RBP30■■■□□ 2.39
NR1H3-207ENST00000420369 FYCO1Q9BQS8 1478 aa29.92■■■□□ 2.38
NR1H3-207ENST00000420369 HECW1Q76N89 1606 aa29.91■■■□□ 2.38
NR1H3-207ENST00000420369 RAPGEF6Q8TEU7 1601 aa29.91■■■□□ 2.38
NR1H3-207ENST00000420369 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
NR1H3-207ENST00000420369 ARHGEF11O15085 1522 aa29.85■■■□□ 2.37
NR1H3-207ENST00000420369 LRRIQ1Q96JM4 1722 aa29.85■■■□□ 2.37
NR1H3-207ENST00000420369 CFAP43Q8NDM7 1665 aa29.84■■■□□ 2.37
NR1H3-207ENST00000420369 ABCA8O94911 1581 aa29.83■■■□□ 2.37
NR1H3-207ENST00000420369 PTPRGP23470 1445 aa29.83■■■□□ 2.37
NR1H3-207ENST00000420369 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
NR1H3-207ENST00000420369 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
NR1H3-207ENST00000420369 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
NR1H3-207ENST00000420369 TTBK1Q5TCY1 1321 aaPredicted RBP29.79■■■□□ 2.36
NR1H3-207ENST00000420369 PLB1Q6P1J6 1458 aa29.76■■■□□ 2.35
NR1H3-207ENST00000420369 TIAM1Q13009 1591 aa29.73■■■□□ 2.35
NR1H3-207ENST00000420369 CCDC18Q5T9S5 1454 aa29.73■■■□□ 2.35
NR1H3-207ENST00000420369 ABCC2Q92887 1545 aa29.71■■■□□ 2.35
NR1H3-207ENST00000420369 MAP3K1Q13233 1512 aa29.71■■■□□ 2.35
NR1H3-207ENST00000420369 UACAQ9BZF9 1416 aa29.7■■■□□ 2.34
NR1H3-207ENST00000420369 NUP153P49790 1475 aaKnown RBP29.69■■■□□ 2.34
NR1H3-207ENST00000420369 APLP2Q06481 763 aa29.67■■■□□ 2.34
NR1H3-207ENST00000420369 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
NR1H3-207ENST00000420369 EPRSP07814 1512 aaKnown RBP29.66■■■□□ 2.34
NR1H3-207ENST00000420369 UHRF1BP1LA0JNW5 1464 aa29.65■■■□□ 2.34
NR1H3-207ENST00000420369 ADCY10Q96PN6 1610 aa29.64■■■□□ 2.34
NR1H3-207ENST00000420369 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
NR1H3-207ENST00000420369 ZCCHC11Q5TAX3 1644 aaKnown RBP29.57■■■□□ 2.32
NR1H3-207ENST00000420369 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
NR1H3-207ENST00000420369 KDM5BQ9UGL1 1544 aa29.5■■■□□ 2.31
NR1H3-207ENST00000420369 LRRC9Q6ZRR7 1453 aa29.5■■■□□ 2.31
NR1H3-207ENST00000420369 ATP10BO94823 1461 aa29.49■■■□□ 2.31
NR1H3-207ENST00000420369 SUPT6HQ7KZ85 1726 aaKnown RBP29.46■■■□□ 2.31
NR1H3-207ENST00000420369 ARID3CA6NKF2 412 aa29.46■■■□□ 2.31
NR1H3-207ENST00000420369 MAGI3Q5TCQ9 1506 aa29.44■■■□□ 2.3
NR1H3-207ENST00000420369 MTUS2Q5JR59 1369 aa29.43■■■□□ 2.3
NR1H3-207ENST00000420369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.41■■■□□ 2.3
NR1H3-207ENST00000420369 HNRNPUL2Q1KMD3 747 aaKnown RBP29.41■■■□□ 2.3
NR1H3-207ENST00000420369 CDK11AQ9UQ88 783 aaPredicted RBP29.4■■■□□ 2.3
NR1H3-207ENST00000420369 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
NR1H3-207ENST00000420369 KIF14Q15058 1648 aa29.37■■■□□ 2.29
NR1H3-207ENST00000420369 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
NR1H3-207ENST00000420369 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
NR1H3-207ENST00000420369 PPARGC1BQ86YN6 1023 aaKnown RBP29.36■■■□□ 2.29
NR1H3-207ENST00000420369 NPM1P06748 294 aaKnown RBP eCLIP29.29■■■□□ 2.28
NR1H3-207ENST00000420369 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
NR1H3-207ENST00000420369 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
NR1H3-207ENST00000420369 NCOA2Q15596 1464 aa29.26■■■□□ 2.27
NR1H3-207ENST00000420369 WDR7Q9Y4E6 1490 aa29.26■■■□□ 2.27
NR1H3-207ENST00000420369 DNAJC5Q9H3Z4 198 aa29.26■■■□□ 2.27
NR1H3-207ENST00000420369 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
NR1H3-207ENST00000420369 ASXL2Q76L83 1435 aa29.21■■■□□ 2.27
NR1H3-207ENST00000420369 CDC42BPAQ5VT25 1732 aa29.19■■■□□ 2.26
NR1H3-207ENST00000420369 MYO5CQ9NQX4 1742 aa29.18■■■□□ 2.26
NR1H3-207ENST00000420369 TTC37Q6PGP7 1564 aa29.16■■■□□ 2.26
NR1H3-207ENST00000420369 ABCC10Q5T3U5 1492 aa29.13■■■□□ 2.25
NR1H3-207ENST00000420369 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.13■■■□□ 2.25
NR1H3-207ENST00000420369 PHLDB1Q86UU1 1377 aa29.13■■■□□ 2.25
NR1H3-207ENST00000420369 PREX2Q70Z35 1606 aa29.12■■■□□ 2.25
NR1H3-207ENST00000420369 ABCA9Q8IUA7 1624 aa29.12■■■□□ 2.25
NR1H3-207ENST00000420369 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
NR1H3-207ENST00000420369 CCNB3Q8WWL7 1395 aa29.08■■■□□ 2.25
NR1H3-207ENST00000420369 CDC42BPBQ9Y5S2 1711 aa29.07■■■□□ 2.24
NR1H3-207ENST00000420369 RRBP1Q9P2E9 1410 aaKnown RBP29.04■■■□□ 2.24
NR1H3-207ENST00000420369 PTPN23Q9H3S7 1636 aa29.04■■■□□ 2.24
NR1H3-207ENST00000420369 FGD6Q6ZV73 1430 aa29.03■■■□□ 2.24
NR1H3-207ENST00000420369 DIP2BQ9P265 1576 aa29.03■■■□□ 2.24
NR1H3-207ENST00000420369 KCNH8Q96L42 1107 aa29.02■■■□□ 2.24
NR1H3-207ENST00000420369 GPATCH8Q9UKJ3 1502 aaKnown RBP29.01■■■□□ 2.23
NR1H3-207ENST00000420369 MIA2Q96PC5 1412 aa29■■■□□ 2.23
NR1H3-207ENST00000420369 GLI2P10070 1586 aa29■■■□□ 2.23
NR1H3-207ENST00000420369 KIF13AQ9H1H9 1805 aa28.99■■■□□ 2.23
NR1H3-207ENST00000420369 TRIM26Q12899 539 aaPredicted RBP28.99■■■□□ 2.23
NR1H3-207ENST00000420369 ARAP3Q8WWN8 1544 aa28.98■■■□□ 2.23
NR1H3-207ENST00000420369 MAP3K4Q9Y6R4 1608 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms