RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 IGF1RP08069 1367 aa35.51■■■■□ 3.27
MCF2L-212ENST00000420013 JPH4Q96JJ6 628 aa35.46■■■■□ 3.27
MCF2L-212ENST00000420013 KIAA0586Q9BVV6 1533 aa35.46■■■■□ 3.27
MCF2L-212ENST00000420013 CARMIL1Q5VZK9 1371 aa35.31■■■■□ 3.24
MCF2L-212ENST00000420013 KIF13AQ9H1H9 1805 aa35.26■■■■□ 3.24
MCF2L-212ENST00000420013 ADCY10Q96PN6 1610 aa35.22■■■■□ 3.23
MCF2L-212ENST00000420013 IQGAP2Q13576 1575 aa35.21■■■■□ 3.23
MCF2L-212ENST00000420013 MAPKBP1O60336 1514 aa35.21■■■■□ 3.23
MCF2L-212ENST00000420013 CARMIL2Q6F5E8 1435 aa35.1■■■■□ 3.21
MCF2L-212ENST00000420013 RAPGEF2Q9Y4G8 1499 aa35.09■■■■□ 3.21
MCF2L-212ENST00000420013 DIP2BQ9P265 1576 aa35.06■■■■□ 3.2
MCF2L-212ENST00000420013 ABCC10Q5T3U5 1492 aa35.06■■■■□ 3.2
MCF2L-212ENST00000420013 NPM1P06748 294 aaKnown RBP eCLIP35.05■■■■□ 3.2
MCF2L-212ENST00000420013 TNIKQ9UKE5 1360 aa35.01■■■■□ 3.2
MCF2L-212ENST00000420013 PTPRGP23470 1445 aa35■■■■□ 3.19
MCF2L-212ENST00000420013 UGGT2Q9NYU1 1516 aa34.98■■■■□ 3.19
MCF2L-212ENST00000420013 CTTNBP2Q8WZ74 1663 aa34.97■■■■□ 3.19
MCF2L-212ENST00000420013 DISP1Q96F81 1524 aa34.94■■■■□ 3.18
MCF2L-212ENST00000420013 ABCC2Q92887 1545 aa34.91■■■■□ 3.18
MCF2L-212ENST00000420013 KIAA0556O60303 1618 aa34.9■■■■□ 3.18
MCF2L-212ENST00000420013 UHRF1BP1LA0JNW5 1464 aa34.89■■■■□ 3.18
MCF2L-212ENST00000420013 FAM69CQ0P6D2 419 aa34.84■■■■□ 3.17
MCF2L-212ENST00000420013 UACAQ9BZF9 1416 aa34.8■■■■□ 3.16
MCF2L-212ENST00000420013 PRXQ9BXM0 1461 aa34.78■■■■□ 3.16
MCF2L-212ENST00000420013 PLB1Q6P1J6 1458 aa34.75■■■■□ 3.15
MCF2L-212ENST00000420013 TSPOAP1O95153 1857 aa34.72■■■■□ 3.15
MCF2L-212ENST00000420013 GOLGA3Q08378 1498 aa34.71■■■■□ 3.15
MCF2L-212ENST00000420013 KDM5BQ9UGL1 1544 aa34.71■■■■□ 3.15
MCF2L-212ENST00000420013 GLI2P10070 1586 aa34.7■■■■□ 3.15
MCF2L-212ENST00000420013 TTBK1Q5TCY1 1321 aaPredicted RBP34.7■■■■□ 3.15
MCF2L-212ENST00000420013 ASXL2Q76L83 1435 aa34.7■■■■□ 3.15
MCF2L-212ENST00000420013 KDM6BO15054 1643 aa34.69■■■■□ 3.14
MCF2L-212ENST00000420013 ZCCHC11Q5TAX3 1644 aaKnown RBP34.67■■■■□ 3.14
MCF2L-212ENST00000420013 PPRC1Q5VV67 1664 aaKnown RBP34.58■■■■□ 3.13
MCF2L-212ENST00000420013 AEBP2Q6ZN18 517 aaPredicted RBP34.56■■■■□ 3.12
MCF2L-212ENST00000420013 EEA1Q15075 1411 aa34.54■■■■□ 3.12
MCF2L-212ENST00000420013 ABCA8O94911 1581 aa34.53■■■■□ 3.12
MCF2L-212ENST00000420013 MAP3K4Q9Y6R4 1608 aa34.53■■■■□ 3.12
MCF2L-212ENST00000420013 EPRSP07814 1512 aaKnown RBP34.53■■■■□ 3.12
MCF2L-212ENST00000420013 WDR7Q9Y4E6 1490 aa34.46■■■■□ 3.11
MCF2L-212ENST00000420013 SAMD9Q5K651 1589 aa34.41■■■■□ 3.1
MCF2L-212ENST00000420013 TEX14Q8IWB6 1497 aa34.41■■■■□ 3.1
MCF2L-212ENST00000420013 CSRNP3Q8WYN3 585 aa34.4■■■■□ 3.1
MCF2L-212ENST00000420013 CFAP43Q8NDM7 1665 aa34.35■■■■□ 3.09
MCF2L-212ENST00000420013 KIF21BO75037 1637 aa34.27■■■■□ 3.08
MCF2L-212ENST00000420013 FAM9AQ8IZU1 332 aaPredicted RBP34.26■■■■□ 3.08
MCF2L-212ENST00000420013 RAPGEF6Q8TEU7 1601 aa34.22■■■■□ 3.07
MCF2L-212ENST00000420013 MAGI3Q5TCQ9 1506 aa34.22■■■■□ 3.07
MCF2L-212ENST00000420013 COL17A1Q9UMD9 1497 aaPredicted RBP34.15■■■■□ 3.06
MCF2L-212ENST00000420013 CD109Q6YHK3 1445 aa34.14■■■■□ 3.06
MCF2L-212ENST00000420013 EFCAB5A4FU69 1503 aa34.14■■■■□ 3.06
MCF2L-212ENST00000420013 ATP10BO94823 1461 aa34.13■■■■□ 3.05
MCF2L-212ENST00000420013 P3H3Q8IVL6 736 aa34.09■■■■□ 3.05
MCF2L-212ENST00000420013 ABCA9Q8IUA7 1624 aa34.08■■■■□ 3.05
MCF2L-212ENST00000420013 FHOD3Q2V2M9 1422 aa34.03■■■■□ 3.04
MCF2L-212ENST00000420013 NUP153P49790 1475 aaKnown RBP34.01■■■■□ 3.04
MCF2L-212ENST00000420013 KDM4FA0A1W2PPD8 638 aa34.01■■■■□ 3.03
MCF2L-212ENST00000420013 KCNH8Q96L42 1107 aa34.01■■■■□ 3.03
MCF2L-212ENST00000420013 ADGRL1O94910 1474 aa33.96■■■■□ 3.03
MCF2L-212ENST00000420013 ARAP3Q8WWN8 1544 aa33.93■■■■□ 3.02
MCF2L-212ENST00000420013 ARID3CA6NKF2 412 aa33.91■■■■□ 3.02
MCF2L-212ENST00000420013 PHLDB1Q86UU1 1377 aa33.89■■■■□ 3.02
MCF2L-212ENST00000420013 CHIC1Q5VXU3 224 aa33.86■■■■□ 3.01
MCF2L-212ENST00000420013 NEO1Q92859 1461 aa33.85■■■■□ 3.01
MCF2L-212ENST00000420013 RANGAP1P46060 587 aaPredicted RBP33.82■■■■□ 3
MCF2L-212ENST00000420013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.79■■■■□ 3
MCF2L-212ENST00000420013 HNRNPUL2Q1KMD3 747 aaKnown RBP33.79■■■■□ 3
MCF2L-212ENST00000420013 CFAP74Q9C0B2 1584 aa33.78■■■■□ 3
MCF2L-212ENST00000420013 HECW1Q76N89 1606 aa33.76■■■■□ 3
MCF2L-212ENST00000420013 FMN1Q68DA7 1419 aa33.74■■■□□ 2.99
MCF2L-212ENST00000420013 ARHGAP35Q9NRY4 1499 aa33.71■■■□□ 2.99
MCF2L-212ENST00000420013 PLEKHD1A6NEE1 506 aa33.7■■■□□ 2.99
MCF2L-212ENST00000420013 UBTFP17480 764 aaKnown RBP33.7■■■□□ 2.99
MCF2L-212ENST00000420013 FRMPD1Q5SYB0 1578 aa33.69■■■□□ 2.98
MCF2L-212ENST00000420013 CDK13Q14004 1512 aaKnown RBP33.69■■■□□ 2.98
MCF2L-212ENST00000420013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.69■■■□□ 2.98
MCF2L-212ENST00000420013 TTC37Q6PGP7 1564 aa33.68■■■□□ 2.98
MCF2L-212ENST00000420013 RICTORQ6R327 1708 aa33.62■■■□□ 2.97
MCF2L-212ENST00000420013 FANCAO15360 1455 aa33.59■■■□□ 2.97
MCF2L-212ENST00000420013 ARHGEF40Q8TER5 1519 aa33.58■■■□□ 2.97
MCF2L-212ENST00000420013 DENND4BO75064 1496 aaPredicted RBP33.55■■■□□ 2.96
MCF2L-212ENST00000420013 AKNAQ7Z591 1439 aa33.53■■■□□ 2.96
MCF2L-212ENST00000420013 MYO5CQ9NQX4 1742 aa33.53■■■□□ 2.96
MCF2L-212ENST00000420013 ZMYM4Q5VZL5 1548 aa33.53■■■□□ 2.96
MCF2L-212ENST00000420013 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
MCF2L-212ENST00000420013 KIF14Q15058 1648 aa33.5■■■□□ 2.95
MCF2L-212ENST00000420013 RAPGEF3O95398 923 aa33.5■■■□□ 2.95
MCF2L-212ENST00000420013 ADAMTSL3P82987 1691 aa33.49■■■□□ 2.95
MCF2L-212ENST00000420013 LRRIQ1Q96JM4 1722 aa33.49■■■□□ 2.95
MCF2L-212ENST00000420013 HECW2Q9P2P5 1572 aa33.47■■■□□ 2.95
MCF2L-212ENST00000420013 BCORL1Q5H9F3 1711 aa33.47■■■□□ 2.95
MCF2L-212ENST00000420013 CDK11AQ9UQ88 783 aaPredicted RBP33.44■■■□□ 2.94
MCF2L-212ENST00000420013 PLCH2O75038 1416 aa33.44■■■□□ 2.94
MCF2L-212ENST00000420013 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
MCF2L-212ENST00000420013 TROQ12816 1431 aaPredicted RBP33.42■■■□□ 2.94
MCF2L-212ENST00000420013 CLIP1P30622 1438 aa33.41■■■□□ 2.94
MCF2L-212ENST00000420013 CCDC18Q5T9S5 1454 aa33.4■■■□□ 2.94
MCF2L-212ENST00000420013 MAGI2Q86UL8 1455 aa33.39■■■□□ 2.94
MCF2L-212ENST00000420013 ZFYVE16Q7Z3T8 1539 aa33.38■■■□□ 2.93
MCF2L-212ENST00000420013 ATP1B4Q9UN42 357 aaPredicted RBP33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms