RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
SFTPA1-202ENST00000419470 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
SFTPA1-202ENST00000419470 CLIP1P30622 1438 aa20.64■□□□□ 0.89
SFTPA1-202ENST00000419470 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
SFTPA1-202ENST00000419470 CTTNBP2Q8WZ74 1663 aa20.62■□□□□ 0.89
SFTPA1-202ENST00000419470 RANGAP1P46060 587 aaPredicted RBP20.54■□□□□ 0.88
SFTPA1-202ENST00000419470 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
SFTPA1-202ENST00000419470 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
SFTPA1-202ENST00000419470 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
SFTPA1-202ENST00000419470 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
SFTPA1-202ENST00000419470 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
SFTPA1-202ENST00000419470 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
SFTPA1-202ENST00000419470 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
SFTPA1-202ENST00000419470 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
SFTPA1-202ENST00000419470 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
SFTPA1-202ENST00000419470 FBLN2P98095 1184 aa20.41■□□□□ 0.86
SFTPA1-202ENST00000419470 KIAA0586Q9BVV6 1533 aa20.4■□□□□ 0.86
SFTPA1-202ENST00000419470 NUP160Q12769 1436 aa20.4■□□□□ 0.86
SFTPA1-202ENST00000419470 CHD1O14646 1710 aa20.39■□□□□ 0.86
SFTPA1-202ENST00000419470 SAMD9Q5K651 1589 aa20.39■□□□□ 0.86
SFTPA1-202ENST00000419470 UGGT2Q9NYU1 1516 aa20.34■□□□□ 0.85
SFTPA1-202ENST00000419470 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
SFTPA1-202ENST00000419470 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
SFTPA1-202ENST00000419470 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
SFTPA1-202ENST00000419470 DISP1Q96F81 1524 aa20.24■□□□□ 0.83
SFTPA1-202ENST00000419470 KIAA0556O60303 1618 aa20.23■□□□□ 0.83
SFTPA1-202ENST00000419470 FMN1Q68DA7 1419 aa20.23■□□□□ 0.83
SFTPA1-202ENST00000419470 PCF11O94913 1555 aaKnown RBP20.22■□□□□ 0.83
SFTPA1-202ENST00000419470 JPH4Q96JJ6 628 aa20.2■□□□□ 0.82
SFTPA1-202ENST00000419470 APLP2Q06481 763 aa20.18■□□□□ 0.82
SFTPA1-202ENST00000419470 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
SFTPA1-202ENST00000419470 CASKIN1Q8WXD9 1431 aa20.18■□□□□ 0.82
SFTPA1-202ENST00000419470 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
SFTPA1-202ENST00000419470 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
SFTPA1-202ENST00000419470 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
SFTPA1-202ENST00000419470 MAP3K1Q13233 1512 aa20.14■□□□□ 0.81
SFTPA1-202ENST00000419470 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
SFTPA1-202ENST00000419470 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
SFTPA1-202ENST00000419470 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
SFTPA1-202ENST00000419470 LRRIQ1Q96JM4 1722 aa20.09■□□□□ 0.81
SFTPA1-202ENST00000419470 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
SFTPA1-202ENST00000419470 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.8
SFTPA1-202ENST00000419470 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
SFTPA1-202ENST00000419470 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
SFTPA1-202ENST00000419470 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
SFTPA1-202ENST00000419470 ATP1B4Q9UN42 357 aaPredicted RBP20.05■□□□□ 0.8
SFTPA1-202ENST00000419470 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
SFTPA1-202ENST00000419470 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.8
SFTPA1-202ENST00000419470 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
SFTPA1-202ENST00000419470 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
SFTPA1-202ENST00000419470 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
SFTPA1-202ENST00000419470 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
SFTPA1-202ENST00000419470 PLB1Q6P1J6 1458 aa19.97■□□□□ 0.79
SFTPA1-202ENST00000419470 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
SFTPA1-202ENST00000419470 NUP153P49790 1475 aaKnown RBP19.96■□□□□ 0.79
SFTPA1-202ENST00000419470 ABCA8O94911 1581 aa19.95■□□□□ 0.78
SFTPA1-202ENST00000419470 PTPRGP23470 1445 aa19.94■□□□□ 0.78
SFTPA1-202ENST00000419470 CDK13Q14004 1512 aaKnown RBP19.93■□□□□ 0.78
SFTPA1-202ENST00000419470 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
SFTPA1-202ENST00000419470 MTUS2Q5JR59 1369 aa19.88■□□□□ 0.77
SFTPA1-202ENST00000419470 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
SFTPA1-202ENST00000419470 ARID3CA6NKF2 412 aa19.85■□□□□ 0.77
SFTPA1-202ENST00000419470 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
SFTPA1-202ENST00000419470 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
SFTPA1-202ENST00000419470 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.76
SFTPA1-202ENST00000419470 RRBP1Q9P2E9 1410 aaKnown RBP19.82■□□□□ 0.76
SFTPA1-202ENST00000419470 PHLDB1Q86UU1 1377 aa19.81■□□□□ 0.76
SFTPA1-202ENST00000419470 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
SFTPA1-202ENST00000419470 ATP10BO94823 1461 aa19.8■□□□□ 0.76
SFTPA1-202ENST00000419470 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
SFTPA1-202ENST00000419470 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
SFTPA1-202ENST00000419470 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
SFTPA1-202ENST00000419470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
SFTPA1-202ENST00000419470 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
SFTPA1-202ENST00000419470 UHRF1BP1LA0JNW5 1464 aa19.76■□□□□ 0.75
SFTPA1-202ENST00000419470 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
SFTPA1-202ENST00000419470 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
SFTPA1-202ENST00000419470 ADCY10Q96PN6 1610 aa19.72■□□□□ 0.75
SFTPA1-202ENST00000419470 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
SFTPA1-202ENST00000419470 FGD6Q6ZV73 1430 aa19.69■□□□□ 0.74
SFTPA1-202ENST00000419470 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
SFTPA1-202ENST00000419470 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
SFTPA1-202ENST00000419470 ZCCHC11Q5TAX3 1644 aaKnown RBP19.68■□□□□ 0.74
SFTPA1-202ENST00000419470 PLEKHD1A6NEE1 506 aa19.68■□□□□ 0.74
SFTPA1-202ENST00000419470 KIF14Q15058 1648 aa19.68■□□□□ 0.74
SFTPA1-202ENST00000419470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.64■□□□□ 0.74
SFTPA1-202ENST00000419470 PTPN23Q9H3S7 1636 aa19.61■□□□□ 0.73
SFTPA1-202ENST00000419470 MIA2Q96PC5 1412 aa19.6■□□□□ 0.73
SFTPA1-202ENST00000419470 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
SFTPA1-202ENST00000419470 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
SFTPA1-202ENST00000419470 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
SFTPA1-202ENST00000419470 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
SFTPA1-202ENST00000419470 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
SFTPA1-202ENST00000419470 ITSN2Q9NZM3 1697 aa19.59■□□□□ 0.73
SFTPA1-202ENST00000419470 TCOF1Q13428 1488 aaKnown RBP19.58■□□□□ 0.72
SFTPA1-202ENST00000419470 CDC42BPAQ5VT25 1732 aa19.57■□□□□ 0.72
SFTPA1-202ENST00000419470 GPATCH8Q9UKJ3 1502 aaKnown RBP19.57■□□□□ 0.72
SFTPA1-202ENST00000419470 ITGAEP38570 1179 aa19.52■□□□□ 0.72
SFTPA1-202ENST00000419470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.71
SFTPA1-202ENST00000419470 TTC37Q6PGP7 1564 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms