RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 KIAA0586Q9BVV6 1533 aa34.57■■■■□ 3.12
GTF3A-202ENST00000419181 JPH4Q96JJ6 628 aa34.56■■■■□ 3.12
GTF3A-202ENST00000419181 PRG4Q92954 1404 aaPredicted RBP34.55■■■■□ 3.12
GTF3A-202ENST00000419181 RAPGEF2Q9Y4G8 1499 aa34.46■■■■□ 3.11
GTF3A-202ENST00000419181 TRHP20396 242 aaPredicted RBP34.39■■■■□ 3.1
GTF3A-202ENST00000419181 IQGAP2Q13576 1575 aa34.36■■■■□ 3.09
GTF3A-202ENST00000419181 PRXQ9BXM0 1461 aa34.31■■■■□ 3.08
GTF3A-202ENST00000419181 CTTNBP2Q8WZ74 1663 aa34.2■■■■□ 3.07
GTF3A-202ENST00000419181 EEA1Q15075 1411 aa34.19■■■■□ 3.06
GTF3A-202ENST00000419181 CARMIL2Q6F5E8 1435 aa34.18■■■■□ 3.06
GTF3A-202ENST00000419181 UGGT2Q9NYU1 1516 aa34.17■■■■□ 3.06
GTF3A-202ENST00000419181 CHIC1Q5VXU3 224 aa34.15■■■■□ 3.06
GTF3A-202ENST00000419181 CSRNP3Q8WYN3 585 aa34.15■■■■□ 3.06
GTF3A-202ENST00000419181 DISP1Q96F81 1524 aa34.14■■■■□ 3.06
GTF3A-202ENST00000419181 ADCY10Q96PN6 1610 aa34.1■■■■□ 3.05
GTF3A-202ENST00000419181 TNIKQ9UKE5 1360 aa34.1■■■■□ 3.05
GTF3A-202ENST00000419181 PTPRGP23470 1445 aa34.08■■■■□ 3.05
GTF3A-202ENST00000419181 KIAA0556O60303 1618 aa34.04■■■■□ 3.04
GTF3A-202ENST00000419181 FAM9AQ8IZU1 332 aaPredicted RBP33.95■■■■□ 3.03
GTF3A-202ENST00000419181 TTBK1Q5TCY1 1321 aaPredicted RBP33.95■■■■□ 3.03
GTF3A-202ENST00000419181 GOLGA3Q08378 1498 aa33.93■■■■□ 3.02
GTF3A-202ENST00000419181 MAPKBP1O60336 1514 aa33.93■■■■□ 3.02
GTF3A-202ENST00000419181 NPM1P06748 294 aaKnown RBP eCLIP33.91■■■■□ 3.02
GTF3A-202ENST00000419181 KIF21BO75037 1637 aa33.9■■■■□ 3.02
GTF3A-202ENST00000419181 UHRF1BP1LA0JNW5 1464 aa33.88■■■■□ 3.01
GTF3A-202ENST00000419181 UACAQ9BZF9 1416 aa33.87■■■■□ 3.01
GTF3A-202ENST00000419181 KIF13AQ9H1H9 1805 aa33.86■■■■□ 3.01
GTF3A-202ENST00000419181 ABCC2Q92887 1545 aa33.85■■■■□ 3.01
GTF3A-202ENST00000419181 ABCC10Q5T3U5 1492 aa33.78■■■■□ 3
GTF3A-202ENST00000419181 SAMD9Q5K651 1589 aa33.75■■■□□ 2.99
GTF3A-202ENST00000419181 DIP2BQ9P265 1576 aa33.75■■■□□ 2.99
GTF3A-202ENST00000419181 KDM5BQ9UGL1 1544 aa33.72■■■□□ 2.99
GTF3A-202ENST00000419181 PLB1Q6P1J6 1458 aa33.71■■■□□ 2.99
GTF3A-202ENST00000419181 ABCA8O94911 1581 aa33.68■■■□□ 2.98
GTF3A-202ENST00000419181 FAM69CQ0P6D2 419 aa33.66■■■□□ 2.98
GTF3A-202ENST00000419181 ZCCHC11Q5TAX3 1644 aaKnown RBP33.66■■■□□ 2.98
GTF3A-202ENST00000419181 ASXL2Q76L83 1435 aa33.65■■■□□ 2.98
GTF3A-202ENST00000419181 P3H3Q8IVL6 736 aa33.62■■■□□ 2.97
GTF3A-202ENST00000419181 EFCAB5A4FU69 1503 aa33.53■■■□□ 2.96
GTF3A-202ENST00000419181 RANGAP1P46060 587 aaPredicted RBP33.53■■■□□ 2.96
GTF3A-202ENST00000419181 EHMT2Q96KQ7 1210 aa33.51■■■□□ 2.95
GTF3A-202ENST00000419181 GLI2P10070 1586 aa33.51■■■□□ 2.95
GTF3A-202ENST00000419181 UBTFP17480 764 aaKnown RBP33.5■■■□□ 2.95
GTF3A-202ENST00000419181 FHOD3Q2V2M9 1422 aa33.49■■■□□ 2.95
GTF3A-202ENST00000419181 EPRSP07814 1512 aaKnown RBP33.46■■■□□ 2.95
GTF3A-202ENST00000419181 RAPGEF6Q8TEU7 1601 aa33.46■■■□□ 2.95
GTF3A-202ENST00000419181 WDR7Q9Y4E6 1490 aa33.44■■■□□ 2.94
GTF3A-202ENST00000419181 TSPOAP1O95153 1857 aa33.44■■■□□ 2.94
GTF3A-202ENST00000419181 ATP10BO94823 1461 aa33.37■■■□□ 2.93
GTF3A-202ENST00000419181 MAP3K4Q9Y6R4 1608 aa33.36■■■□□ 2.93
GTF3A-202ENST00000419181 PPRC1Q5VV67 1664 aaKnown RBP33.36■■■□□ 2.93
GTF3A-202ENST00000419181 NUP153P49790 1475 aaKnown RBP33.33■■■□□ 2.93
GTF3A-202ENST00000419181 ARHGAP35Q9NRY4 1499 aa33.31■■■□□ 2.92
GTF3A-202ENST00000419181 ARID3CA6NKF2 412 aa33.31■■■□□ 2.92
GTF3A-202ENST00000419181 KDM6BO15054 1643 aa33.24■■■□□ 2.91
GTF3A-202ENST00000419181 CFAP43Q8NDM7 1665 aa33.22■■■□□ 2.91
GTF3A-202ENST00000419181 KCNH8Q96L42 1107 aa33.21■■■□□ 2.91
GTF3A-202ENST00000419181 FMN1Q68DA7 1419 aa33.19■■■□□ 2.9
GTF3A-202ENST00000419181 TEX14Q8IWB6 1497 aa33.18■■■□□ 2.9
GTF3A-202ENST00000419181 CD109Q6YHK3 1445 aa33.14■■■□□ 2.9
GTF3A-202ENST00000419181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.14■■■□□ 2.9
GTF3A-202ENST00000419181 HNRNPUL2Q1KMD3 747 aaKnown RBP33.14■■■□□ 2.9
GTF3A-202ENST00000419181 MAGI3Q5TCQ9 1506 aa33.12■■■□□ 2.89
GTF3A-202ENST00000419181 ABCA9Q8IUA7 1624 aa33.1■■■□□ 2.89
GTF3A-202ENST00000419181 HECW1Q76N89 1606 aa33.1■■■□□ 2.89
GTF3A-202ENST00000419181 CDK13Q14004 1512 aaKnown RBP33.07■■■□□ 2.88
GTF3A-202ENST00000419181 AEBP2Q6ZN18 517 aaPredicted RBP33.06■■■□□ 2.88
GTF3A-202ENST00000419181 COL17A1Q9UMD9 1497 aaPredicted RBP33.03■■■□□ 2.88
GTF3A-202ENST00000419181 CLIP1P30622 1438 aa33.02■■■□□ 2.88
GTF3A-202ENST00000419181 PLEKHD1A6NEE1 506 aa33.01■■■□□ 2.87
GTF3A-202ENST00000419181 LRRIQ1Q96JM4 1722 aa32.95■■■□□ 2.87
GTF3A-202ENST00000419181 ATP1B4Q9UN42 357 aaPredicted RBP32.95■■■□□ 2.87
GTF3A-202ENST00000419181 PCF11O94913 1555 aaKnown RBP32.95■■■□□ 2.86
GTF3A-202ENST00000419181 CASKIN1Q8WXD9 1431 aa32.93■■■□□ 2.86
GTF3A-202ENST00000419181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.89■■■□□ 2.862e-7■■■■□ 26.2
GTF3A-202ENST00000419181 TTC37Q6PGP7 1564 aa32.87■■■□□ 2.85
GTF3A-202ENST00000419181 ARAP3Q8WWN8 1544 aa32.85■■■□□ 2.85
GTF3A-202ENST00000419181 FYCO1Q9BQS8 1478 aa32.85■■■□□ 2.85
GTF3A-202ENST00000419181 NEO1Q92859 1461 aa32.83■■■□□ 2.85
GTF3A-202ENST00000419181 PHLDB1Q86UU1 1377 aa32.83■■■□□ 2.85
GTF3A-202ENST00000419181 CCDC18Q5T9S5 1454 aa32.82■■■□□ 2.84
GTF3A-202ENST00000419181 CDK11AQ9UQ88 783 aaPredicted RBP32.82■■■□□ 2.84
GTF3A-202ENST00000419181 CEP162Q5TB80 1403 aa32.82■■■□□ 2.84
GTF3A-202ENST00000419181 TROQ12816 1431 aaPredicted RBP32.78■■■□□ 2.84
GTF3A-202ENST00000419181 KIF14Q15058 1648 aa32.75■■■□□ 2.83
GTF3A-202ENST00000419181 LOC105371045A0A1W2PR82 267 aa32.73■■■□□ 2.83
GTF3A-202ENST00000419181 CFAP74Q9C0B2 1584 aa32.73■■■□□ 2.83
GTF3A-202ENST00000419181 FANCAO15360 1455 aa32.72■■■□□ 2.83
GTF3A-202ENST00000419181 MYO5CQ9NQX4 1742 aa32.68■■■□□ 2.82
GTF3A-202ENST00000419181 PLCH2O75038 1416 aa32.68■■■□□ 2.82
GTF3A-202ENST00000419181 AKNAQ7Z591 1439 aa32.65■■■□□ 2.82
GTF3A-202ENST00000419181 FRMPD1Q5SYB0 1578 aa32.65■■■□□ 2.82
GTF3A-202ENST00000419181 KDM4FA0A1W2PPD8 638 aa32.63■■■□□ 2.81
GTF3A-202ENST00000419181 RAPGEF3O95398 923 aa32.61■■■□□ 2.81
GTF3A-202ENST00000419181 RICTORQ6R327 1708 aa32.59■■■□□ 2.81
GTF3A-202ENST00000419181 DENND4BO75064 1496 aaPredicted RBP32.58■■■□□ 2.81
GTF3A-202ENST00000419181 ADGRL1O94910 1474 aa32.53■■■□□ 2.8
GTF3A-202ENST00000419181 CDC42BPBQ9Y5S2 1711 aa32.51■■■□□ 2.8
GTF3A-202ENST00000419181 EFCAB2Q5VUJ9 269 aa32.51■■■□□ 2.79
GTF3A-202ENST00000419181 PREX2Q70Z35 1606 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms