RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
CHMP5-202ENST00000419016 NUP160Q12769 1436 aa21.93■■□□□ 1.1
CHMP5-202ENST00000419016 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
CHMP5-202ENST00000419016 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
CHMP5-202ENST00000419016 FBLN2P98095 1184 aa21.9■■□□□ 1.1
CHMP5-202ENST00000419016 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
CHMP5-202ENST00000419016 ARAP1Q96P48 1450 aa21.89■■□□□ 1.09
CHMP5-202ENST00000419016 IQGAP2Q13576 1575 aa21.88■■□□□ 1.09
CHMP5-202ENST00000419016 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
CHMP5-202ENST00000419016 CHD1O14646 1710 aa21.84■■□□□ 1.09
CHMP5-202ENST00000419016 VPS8Q8N3P4 1428 aa21.83■■□□□ 1.09
CHMP5-202ENST00000419016 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
CHMP5-202ENST00000419016 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
CHMP5-202ENST00000419016 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
CHMP5-202ENST00000419016 P3H3Q8IVL6 736 aa21.73■■□□□ 1.07
CHMP5-202ENST00000419016 DISP1Q96F81 1524 aa21.72■■□□□ 1.07
CHMP5-202ENST00000419016 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
CHMP5-202ENST00000419016 CLASP1Q7Z460 1538 aa21.67■■□□□ 1.06
CHMP5-202ENST00000419016 KIAA0556O60303 1618 aa21.66■■□□□ 1.06
CHMP5-202ENST00000419016 FMN1Q68DA7 1419 aa21.64■■□□□ 1.06
CHMP5-202ENST00000419016 SHROOM2Q13796 1616 aa21.64■■□□□ 1.05
CHMP5-202ENST00000419016 CARMIL2Q6F5E8 1435 aa21.6■■□□□ 1.05
CHMP5-202ENST00000419016 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
CHMP5-202ENST00000419016 PRG4Q92954 1404 aaPredicted RBP21.58■■□□□ 1.05
CHMP5-202ENST00000419016 PCF11O94913 1555 aaKnown RBP21.58■■□□□ 1.04
CHMP5-202ENST00000419016 FYCO1Q9BQS8 1478 aa21.57■■□□□ 1.04
CHMP5-202ENST00000419016 OSCARQ8IYS5 282 aa21.54■■□□□ 1.04
CHMP5-202ENST00000419016 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
CHMP5-202ENST00000419016 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
CHMP5-202ENST00000419016 APLP2Q06481 763 aa21.5■■□□□ 1.03
CHMP5-202ENST00000419016 ERCC6L2Q5T890 1561 aa21.48■■□□□ 1.03
CHMP5-202ENST00000419016 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
CHMP5-202ENST00000419016 KANK4Q5T7N3 995 aaPredicted RBP21.45■■□□□ 1.02
CHMP5-202ENST00000419016 PTPRGP23470 1445 aa21.42■■□□□ 1.02
CHMP5-202ENST00000419016 CFAP43Q8NDM7 1665 aa21.42■■□□□ 1.02
CHMP5-202ENST00000419016 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
CHMP5-202ENST00000419016 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
CHMP5-202ENST00000419016 ATP1B4Q9UN42 357 aaPredicted RBP21.41■■□□□ 1.02
CHMP5-202ENST00000419016 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
CHMP5-202ENST00000419016 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
CHMP5-202ENST00000419016 ABCA8O94911 1581 aa21.4■■□□□ 1.02
CHMP5-202ENST00000419016 NUP153P49790 1475 aaKnown RBP21.4■■□□□ 1.02
CHMP5-202ENST00000419016 TTBK1Q5TCY1 1321 aaPredicted RBP21.39■■□□□ 1.02
CHMP5-202ENST00000419016 LRRC9Q6ZRR7 1453 aa21.39■■□□□ 1.01
CHMP5-202ENST00000419016 EPRSP07814 1512 aaKnown RBP21.38■■□□□ 1.01
CHMP5-202ENST00000419016 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
CHMP5-202ENST00000419016 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
CHMP5-202ENST00000419016 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
CHMP5-202ENST00000419016 UACAQ9BZF9 1416 aa21.31■■□□□ 1
CHMP5-202ENST00000419016 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
CHMP5-202ENST00000419016 PCGF6Q9BYE7 350 aa21.27■□□□□ 0.99
CHMP5-202ENST00000419016 ATP10BO94823 1461 aa21.26■□□□□ 0.99
CHMP5-202ENST00000419016 UHRF1BP1LA0JNW5 1464 aa21.25■□□□□ 0.99
CHMP5-202ENST00000419016 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
CHMP5-202ENST00000419016 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
CHMP5-202ENST00000419016 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
CHMP5-202ENST00000419016 EHBP1L1Q8N3D4 1523 aa21.23■□□□□ 0.99
CHMP5-202ENST00000419016 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
CHMP5-202ENST00000419016 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
CHMP5-202ENST00000419016 PHLDB1Q86UU1 1377 aa21.18■□□□□ 0.98
CHMP5-202ENST00000419016 RRBP1Q9P2E9 1410 aaKnown RBP21.16■□□□□ 0.98
CHMP5-202ENST00000419016 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
CHMP5-202ENST00000419016 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
CHMP5-202ENST00000419016 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
CHMP5-202ENST00000419016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.98
CHMP5-202ENST00000419016 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.98
CHMP5-202ENST00000419016 SUPT6HQ7KZ85 1726 aaKnown RBP21.14■□□□□ 0.97
CHMP5-202ENST00000419016 ADCY10Q96PN6 1610 aa21.14■□□□□ 0.97
CHMP5-202ENST00000419016 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
CHMP5-202ENST00000419016 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
CHMP5-202ENST00000419016 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
CHMP5-202ENST00000419016 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
CHMP5-202ENST00000419016 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
CHMP5-202ENST00000419016 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.96
CHMP5-202ENST00000419016 MYOM3Q5VTT5 1437 aa21.06■□□□□ 0.96
CHMP5-202ENST00000419016 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
CHMP5-202ENST00000419016 KIF14Q15058 1648 aa21.03■□□□□ 0.96
CHMP5-202ENST00000419016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.96
CHMP5-202ENST00000419016 ABCC10Q5T3U5 1492 aa21.01■□□□□ 0.95
CHMP5-202ENST00000419016 MIA2Q96PC5 1412 aa20.98■□□□□ 0.95
CHMP5-202ENST00000419016 GPATCH8Q9UKJ3 1502 aaKnown RBP20.96■□□□□ 0.95
CHMP5-202ENST00000419016 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
CHMP5-202ENST00000419016 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
CHMP5-202ENST00000419016 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
CHMP5-202ENST00000419016 PTPN23Q9H3S7 1636 aa20.92■□□□□ 0.94
CHMP5-202ENST00000419016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHMP5-202ENST00000419016 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHMP5-202ENST00000419016 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
CHMP5-202ENST00000419016 ASXL2Q76L83 1435 aa20.91■□□□□ 0.94
CHMP5-202ENST00000419016 ITSN2Q9NZM3 1697 aa20.89■□□□□ 0.93
CHMP5-202ENST00000419016 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
CHMP5-202ENST00000419016 TTC37Q6PGP7 1564 aa20.87■□□□□ 0.93
CHMP5-202ENST00000419016 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
CHMP5-202ENST00000419016 CFDP1Q9UEE9 299 aaPredicted RBP20.86■□□□□ 0.93
CHMP5-202ENST00000419016 ZNF644Q9H582 1327 aaPredicted RBP20.84■□□□□ 0.93
CHMP5-202ENST00000419016 MAPKBP1O60336 1514 aa20.83■□□□□ 0.92
CHMP5-202ENST00000419016 PREX2Q70Z35 1606 aa20.83■□□□□ 0.92
CHMP5-202ENST00000419016 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
CHMP5-202ENST00000419016 CDC42BPBQ9Y5S2 1711 aa20.8■□□□□ 0.92
CHMP5-202ENST00000419016 ITGAEP38570 1179 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms