RNA–Protein interactions for RNA: ENST00000418339.5

TRIOBP-208, Transcript of TRIO and F-actin binding protein, human

APPRIS ALT2 TSL 2

Gene TRIOBP, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIOBP-208	ENST00000418339	JPH4	Q96JJ6	628 aa		34.8	■■■■□ 3.16
TRIOBP-208	ENST00000418339	PRG4	Q92954	1404 aa	Predicted RBP	34.8	■■■■□ 3.16
TRIOBP-208	ENST00000418339	CARMIL1	Q5VZK9	1371 aa		34.68	■■■■□ 3.14
TRIOBP-208	ENST00000418339	KIAA0586	Q9BVV6	1533 aa		34.67	■■■■□ 3.14
TRIOBP-208	ENST00000418339	NPM1	P06748	294 aa	Known RBP eCLIP	34.43	■■■■□ 3.1
TRIOBP-208	ENST00000418339	IQGAP2	Q13576	1575 aa		34.42	■■■■□ 3.1
TRIOBP-208	ENST00000418339	RAPGEF2	Q9Y4G8	1499 aa		34.42	■■■■□ 3.1
TRIOBP-208	ENST00000418339	CARMIL2	Q6F5E8	1435 aa		34.38	■■■■□ 3.09
TRIOBP-208	ENST00000418339	ADCY10	Q96PN6	1610 aa		34.34	■■■■□ 3.09
TRIOBP-208	ENST00000418339	PTPRG	P23470	1445 aa		34.31	■■■■□ 3.08
TRIOBP-208	ENST00000418339	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.3	■■■■□ 3.08
TRIOBP-208	ENST00000418339	KIF13A	Q9H1H9	1805 aa		34.29	■■■■□ 3.08
TRIOBP-208	ENST00000418339	TNIK	Q9UKE5	1360 aa		34.27	■■■■□ 3.08
TRIOBP-208	ENST00000418339	MAPKBP1	O60336	1514 aa		34.24	■■■■□ 3.07
TRIOBP-208	ENST00000418339	CTTNBP2	Q8WZ74	1663 aa		34.18	■■■■□ 3.06
TRIOBP-208	ENST00000418339	UGGT2	Q9NYU1	1516 aa		34.17	■■■■□ 3.06
TRIOBP-208	ENST00000418339	DISP1	Q96F81	1524 aa		34.16	■■■■□ 3.06
TRIOBP-208	ENST00000418339	ABCC10	Q5T3U5	1492 aa		34.16	■■■■□ 3.06
TRIOBP-208	ENST00000418339	FAM69C	Q0P6D2	419 aa		34.16	■■■■□ 3.06
TRIOBP-208	ENST00000418339	DIP2B	Q9P265	1576 aa		34.1	■■■■□ 3.05
TRIOBP-208	ENST00000418339	KIAA0556	O60303	1618 aa		34.08	■■■■□ 3.05
TRIOBP-208	ENST00000418339	PRX	Q9BXM0	1461 aa		34.08	■■■■□ 3.05
TRIOBP-208	ENST00000418339	ABCC2	Q92887	1545 aa		34.07	■■■■□ 3.04
TRIOBP-208	ENST00000418339	UACA	Q9BZF9	1416 aa		34.05	■■■■□ 3.04
TRIOBP-208	ENST00000418339	UHRF1BP1L	A0JNW5	1464 aa		34.03	■■■■□ 3.04
TRIOBP-208	ENST00000418339	GOLGA3	Q08378	1498 aa		34	■■■■□ 3.03
TRIOBP-208	ENST00000418339	CSRNP3	Q8WYN3	585 aa		33.96	■■■■□ 3.03
TRIOBP-208	ENST00000418339	TSPOAP1	O95153	1857 aa		33.94	■■■■□ 3.02
TRIOBP-208	ENST00000418339	ASXL2	Q76L83	1435 aa		33.92	■■■■□ 3.02
TRIOBP-208	ENST00000418339	PLB1	Q6P1J6	1458 aa		33.92	■■■■□ 3.02
TRIOBP-208	ENST00000418339	EEA1	Q15075	1411 aa		33.9	■■■■□ 3.02
TRIOBP-208	ENST00000418339	KDM5B	Q9UGL1	1544 aa		33.87	■■■■□ 3.01
TRIOBP-208	ENST00000418339	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.85	■■■■□ 3.01
TRIOBP-208	ENST00000418339	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.82	■■■■□ 3
TRIOBP-208	ENST00000418339	CHIC1	Q5VXU3	224 aa		33.79	■■■■□ 3
TRIOBP-208	ENST00000418339	GLI2	P10070	1586 aa		33.78	■■■■□ 3
TRIOBP-208	ENST00000418339	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.78	■■■■□ 3
TRIOBP-208	ENST00000418339	KDM6B	O15054	1643 aa		33.77	■■■■□ 3
TRIOBP-208	ENST00000418339	ABCA8	O94911	1581 aa		33.72	■■■□□ 2.99
TRIOBP-208	ENST00000418339	EPRS	P07814	1512 aa	Known RBP	33.71	■■■□□ 2.99
TRIOBP-208	ENST00000418339	P3H3	Q8IVL6	736 aa		33.7	■■■□□ 2.99
TRIOBP-208	ENST00000418339	WDR7	Q9Y4E6	1490 aa		33.65	■■■□□ 2.98
TRIOBP-208	ENST00000418339	PPRC1	Q5VV67	1664 aa	Known RBP	33.64	■■■□□ 2.98
TRIOBP-208	ENST00000418339	SAMD9	Q5K651	1589 aa		33.63	■■■□□ 2.97
TRIOBP-208	ENST00000418339	MAP3K4	Q9Y6R4	1608 aa		33.62	■■■□□ 2.97
TRIOBP-208	ENST00000418339	RANGAP1	P46060	587 aa	Predicted RBP	33.59	■■■□□ 2.97
TRIOBP-208	ENST00000418339	KIF21B	O75037	1637 aa		33.59	■■■□□ 2.97
TRIOBP-208	ENST00000418339	TEX14	Q8IWB6	1497 aa		33.56	■■■□□ 2.96
TRIOBP-208	ENST00000418339	KCNH8	Q96L42	1107 aa		33.53	■■■□□ 2.96
TRIOBP-208	ENST00000418339	ARID3C	A6NKF2	412 aa		33.51	■■■□□ 2.95
TRIOBP-208	ENST00000418339	RAPGEF6	Q8TEU7	1601 aa		33.49	■■■□□ 2.95
TRIOBP-208	ENST00000418339	CFAP43	Q8NDM7	1665 aa		33.47	■■■□□ 2.95
TRIOBP-208	ENST00000418339	ATP10B	O94823	1461 aa		33.44	■■■□□ 2.94
TRIOBP-208	ENST00000418339	FHOD3	Q2V2M9	1422 aa		33.43	■■■□□ 2.94
TRIOBP-208	ENST00000418339	CD109	Q6YHK3	1445 aa		33.43	■■■□□ 2.94
TRIOBP-208	ENST00000418339	EHMT2	Q96KQ7	1210 aa		33.41	■■■□□ 2.94
TRIOBP-208	ENST00000418339	EFCAB5	A4FU69	1503 aa		33.4	■■■□□ 2.94
TRIOBP-208	ENST00000418339	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.4	■■■□□ 2.94
TRIOBP-208	ENST00000418339	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.4	■■■□□ 2.94
TRIOBP-208	ENST00000418339	UBTF	P17480	764 aa	Known RBP	33.39	■■■□□ 2.94
TRIOBP-208	ENST00000418339	MAGI3	Q5TCQ9	1506 aa		33.35	■■■□□ 2.93
TRIOBP-208	ENST00000418339	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.32	■■■□□ 2.92
TRIOBP-208	ENST00000418339	NUP153	P49790	1475 aa	Known RBP	33.3	■■■□□ 2.92
TRIOBP-208	ENST00000418339	ABCA9	Q8IUA7	1624 aa		33.24	■■■□□ 2.91
TRIOBP-208	ENST00000418339	KDM4F	A0A1W2PPD8	638 aa		33.19	■■■□□ 2.9
TRIOBP-208	ENST00000418339	PLEKHD1	A6NEE1	506 aa		33.17	■■■□□ 2.9
TRIOBP-208	ENST00000418339	FMN1	Q68DA7	1419 aa		33.11	■■■□□ 2.89
TRIOBP-208	ENST00000418339	PHLDB1	Q86UU1	1377 aa		33.09	■■■□□ 2.89
TRIOBP-208	ENST00000418339	ARAP3	Q8WWN8	1544 aa		33.09	■■■□□ 2.89
TRIOBP-208	ENST00000418339	ARHGAP35	Q9NRY4	1499 aa		33.09	■■■□□ 2.89
TRIOBP-208	ENST00000418339	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.08	■■■□□ 2.89
TRIOBP-208	ENST00000418339	ADGRL1	O94910	1474 aa		33.07	■■■□□ 2.88
TRIOBP-208	ENST00000418339	HECW1	Q76N89	1606 aa		33.05	■■■□□ 2.88
TRIOBP-208	ENST00000418339	NEO1	Q92859	1461 aa		33.04	■■■□□ 2.88
TRIOBP-208	ENST00000418339	CDK13	Q14004	1512 aa	Known RBP	33.02	■■■□□ 2.88
TRIOBP-208	ENST00000418339	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.96	■■■□□ 2.87
TRIOBP-208	ENST00000418339	CFAP74	Q9C0B2	1584 aa		32.93	■■■□□ 2.86
TRIOBP-208	ENST00000418339	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.93	■■■□□ 2.86
TRIOBP-208	ENST00000418339	TTC37	Q6PGP7	1564 aa		32.92	■■■□□ 2.86
TRIOBP-208	ENST00000418339	RAPGEF3	O95398	923 aa		32.91	■■■□□ 2.86
TRIOBP-208	ENST00000418339	FANCA	O15360	1455 aa		32.87	■■■□□ 2.85
TRIOBP-208	ENST00000418339	AKNA	Q7Z591	1439 aa		32.85	■■■□□ 2.85
TRIOBP-208	ENST00000418339	DENND4B	O75064	1496 aa	Predicted RBP	32.81	■■■□□ 2.84
TRIOBP-208	ENST00000418339	FRMPD1	Q5SYB0	1578 aa		32.81	■■■□□ 2.84
TRIOBP-208	ENST00000418339	LRRIQ1	Q96JM4	1722 aa		32.79	■■■□□ 2.84
TRIOBP-208	ENST00000418339	KIF14	Q15058	1648 aa		32.78	■■■□□ 2.84
TRIOBP-208	ENST00000418339	CLIP1	P30622	1438 aa		32.77	■■■□□ 2.84
TRIOBP-208	ENST00000418339	MYO5C	Q9NQX4	1742 aa		32.77	■■■□□ 2.84
TRIOBP-208	ENST00000418339	PCF11	O94913	1555 aa	Known RBP	32.76	■■■□□ 2.84
TRIOBP-208	ENST00000418339	RICTOR	Q6R327	1708 aa		32.76	■■■□□ 2.83
TRIOBP-208	ENST00000418339	PLCH2	O75038	1416 aa		32.76	■■■□□ 2.83
TRIOBP-208	ENST00000418339	TRO	Q12816	1431 aa	Predicted RBP	32.75	■■■□□ 2.83
TRIOBP-208	ENST00000418339	CASKIN1	Q8WXD9	1431 aa		32.75	■■■□□ 2.83
TRIOBP-208	ENST00000418339	CCDC18	Q5T9S5	1454 aa		32.74	■■■□□ 2.83
TRIOBP-208	ENST00000418339	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.68	■■■□□ 2.82
TRIOBP-208	ENST00000418339	ARHGEF40	Q8TER5	1519 aa		32.67	■■■□□ 2.82
TRIOBP-208	ENST00000418339	EFCAB2	Q5VUJ9	269 aa		32.67	■■■□□ 2.82
TRIOBP-208	ENST00000418339	FYCO1	Q9BQS8	1478 aa		32.66	■■■□□ 2.82
TRIOBP-208	ENST00000418339	SCAPER	Q9BY12	1400 aa		32.64	■■■□□ 2.82
TRIOBP-208	ENST00000418339	ARHGAP5	Q13017	1502 aa		32.62	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms