RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 RAB3GAP2Q9H2M9 1393 aa20.02■□□□□ 0.79
GTF2IRD2B-202ENST00000418185 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
GTF2IRD2B-202ENST00000418185 MYT1Q01538 1121 aa19.96■□□□□ 0.79
GTF2IRD2B-202ENST00000418185 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
GTF2IRD2B-202ENST00000418185 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
GTF2IRD2B-202ENST00000418185 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
GTF2IRD2B-202ENST00000418185 CUX2O14529 1486 aa19.94■□□□□ 0.78
GTF2IRD2B-202ENST00000418185 MTUS2Q5JR59 1369 aa19.89■□□□□ 0.77
GTF2IRD2B-202ENST00000418185 KIF21BO75037 1637 aa19.87■□□□□ 0.77
GTF2IRD2B-202ENST00000418185 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
GTF2IRD2B-202ENST00000418185 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
GTF2IRD2B-202ENST00000418185 KDM2AQ9Y2K7 1162 aa19.81■□□□□ 0.76
GTF2IRD2B-202ENST00000418185 MRS2Q9HD23 443 aa19.8■□□□□ 0.76
GTF2IRD2B-202ENST00000418185 FHOD3Q2V2M9 1422 aa19.8■□□□□ 0.76
GTF2IRD2B-202ENST00000418185 CDK11AQ9UQ88 783 aaPredicted RBP19.8■□□□□ 0.76
GTF2IRD2B-202ENST00000418185 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 NBR1Q14596 966 aa19.74■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 PHLDB1Q86UU1 1377 aa19.73■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 RBM19Q9Y4C8 960 aaKnown RBP19.73■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
GTF2IRD2B-202ENST00000418185 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 ANP32EQ9BTT0 268 aa19.69■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 MYT1LQ9UL68 1186 aa19.68■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 HSPA5P11021 654 aaKnown RBP19.67■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 IGF1RP08069 1367 aa19.65■□□□□ 0.74
GTF2IRD2B-202ENST00000418185 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.73
GTF2IRD2B-202ENST00000418185 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
GTF2IRD2B-202ENST00000418185 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
GTF2IRD2B-202ENST00000418185 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
GTF2IRD2B-202ENST00000418185 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 CUX1P39880 1505 aa19.5■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 TMC1Q8TDI8 760 aa19.5■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 ZNF644Q9H582 1327 aaPredicted RBP19.49■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
GTF2IRD2B-202ENST00000418185 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
GTF2IRD2B-202ENST00000418185 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
GTF2IRD2B-202ENST00000418185 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
GTF2IRD2B-202ENST00000418185 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
GTF2IRD2B-202ENST00000418185 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
GTF2IRD2B-202ENST00000418185 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
GTF2IRD2B-202ENST00000418185 CFDP1Q9UEE9 299 aaPredicted RBP19.39■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 NESP48681 1621 aa19.39■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 CCER2I3L3R5 266 aa19.38■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 LRRC9Q6ZRR7 1453 aa19.38■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 CFTRP13569 1480 aa19.37■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.69
GTF2IRD2B-202ENST00000418185 CC2D1BQ5T0F9 858 aaKnown RBP19.33■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 PKD2Q13563 968 aa19.32■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 LAS1LQ9Y4W2 734 aaKnown RBP19.28■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 NBPF8Q3BBV2 869 aa19.28■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 RTN4Q9NQC3 1192 aaKnown RBP19.28■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 ANP32AP39687 249 aaKnown RBP19.27■□□□□ 0.68
GTF2IRD2B-202ENST00000418185 MSH5O43196 834 aa19.25■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 FGD6Q6ZV73 1430 aa19.24■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
GTF2IRD2B-202ENST00000418185 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 PLIN1O60240 522 aa19.19■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 CHGAP10645 457 aaKnown RBP19.19■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 ARXQ96QS3 562 aa19.19■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 PTPRKQ15262 1439 aa19.18■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 FMN1Q68DA7 1419 aa19.18■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 HNRNPMP52272 730 aaKnown RBP eCLIP19.17■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 TIAM1Q13009 1591 aa19.16■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
GTF2IRD2B-202ENST00000418185 TNNT2P45379 298 aaPredicted RBP19.14■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 NEUROD2Q15784 382 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms