RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
TGFBR3-203ENST00000417833 SHROOM2Q13796 1616 aa22.27■■□□□ 1.16
TGFBR3-203ENST00000417833 RAPGEF2Q9Y4G8 1499 aa22.23■■□□□ 1.15
TGFBR3-203ENST00000417833 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
TGFBR3-203ENST00000417833 EEA1Q15075 1411 aa22.21■■□□□ 1.15
TGFBR3-203ENST00000417833 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
TGFBR3-203ENST00000417833 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
TGFBR3-203ENST00000417833 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
TGFBR3-203ENST00000417833 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
TGFBR3-203ENST00000417833 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
TGFBR3-203ENST00000417833 IQGAP2Q13576 1575 aa22.08■■□□□ 1.12
TGFBR3-203ENST00000417833 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
TGFBR3-203ENST00000417833 UGGT2Q9NYU1 1516 aa21.99■■□□□ 1.11
TGFBR3-203ENST00000417833 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
TGFBR3-203ENST00000417833 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
TGFBR3-203ENST00000417833 KIF13AQ9H1H9 1805 aa21.96■■□□□ 1.11
TGFBR3-203ENST00000417833 KIF21BO75037 1637 aa21.95■■□□□ 1.1
TGFBR3-203ENST00000417833 ILDR1Q86SU0 546 aaPredicted RBP21.94■■□□□ 1.1
TGFBR3-203ENST00000417833 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
TGFBR3-203ENST00000417833 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
TGFBR3-203ENST00000417833 PTPRGP23470 1445 aa21.88■■□□□ 1.09
TGFBR3-203ENST00000417833 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
TGFBR3-203ENST00000417833 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
TGFBR3-203ENST00000417833 KDM4FA0A1W2PPD8 638 aa21.82■■□□□ 1.08
TGFBR3-203ENST00000417833 ADCY10Q96PN6 1610 aa21.79■■□□□ 1.08
TGFBR3-203ENST00000417833 ABCC10Q5T3U5 1492 aa21.77■■□□□ 1.08
TGFBR3-203ENST00000417833 FAM69CQ0P6D2 419 aa21.76■■□□□ 1.07
TGFBR3-203ENST00000417833 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
TGFBR3-203ENST00000417833 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
TGFBR3-203ENST00000417833 NPM1P06748 294 aaKnown RBP eCLIP21.74■■□□□ 1.07
TGFBR3-203ENST00000417833 UACAQ9BZF9 1416 aa21.73■■□□□ 1.07
TGFBR3-203ENST00000417833 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
TGFBR3-203ENST00000417833 TTBK1Q5TCY1 1321 aaPredicted RBP21.71■■□□□ 1.07
TGFBR3-203ENST00000417833 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
TGFBR3-203ENST00000417833 ABCC2Q92887 1545 aa21.69■■□□□ 1.06
TGFBR3-203ENST00000417833 KDM6BO15054 1643 aa21.68■■□□□ 1.06
TGFBR3-203ENST00000417833 DIP2BQ9P265 1576 aa21.67■■□□□ 1.06
TGFBR3-203ENST00000417833 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
TGFBR3-203ENST00000417833 ABCA8O94911 1581 aa21.65■■□□□ 1.06
TGFBR3-203ENST00000417833 KDM5BQ9UGL1 1544 aa21.64■■□□□ 1.05
TGFBR3-203ENST00000417833 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
TGFBR3-203ENST00000417833 PLB1Q6P1J6 1458 aa21.63■■□□□ 1.05
TGFBR3-203ENST00000417833 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
TGFBR3-203ENST00000417833 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.05
TGFBR3-203ENST00000417833 FHOD3Q2V2M9 1422 aa21.55■■□□□ 1.04
TGFBR3-203ENST00000417833 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
TGFBR3-203ENST00000417833 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
TGFBR3-203ENST00000417833 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.04
TGFBR3-203ENST00000417833 TSPOAP1O95153 1857 aa21.52■■□□□ 1.04
TGFBR3-203ENST00000417833 RAPGEF6Q8TEU7 1601 aa21.51■■□□□ 1.03
TGFBR3-203ENST00000417833 ATP10BO94823 1461 aa21.46■■□□□ 1.03
TGFBR3-203ENST00000417833 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
TGFBR3-203ENST00000417833 GLI2P10070 1586 aa21.45■■□□□ 1.02
TGFBR3-203ENST00000417833 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
TGFBR3-203ENST00000417833 NUP153P49790 1475 aaKnown RBP21.44■■□□□ 1.02
TGFBR3-203ENST00000417833 WDR7Q9Y4E6 1490 aa21.43■■□□□ 1.02
TGFBR3-203ENST00000417833 EPRSP07814 1512 aaKnown RBP21.41■■□□□ 1.02
TGFBR3-203ENST00000417833 HECW2Q9P2P5 1572 aa21.4■■□□□ 1.02
TGFBR3-203ENST00000417833 CLIP1P30622 1438 aa21.38■■□□□ 1.01
TGFBR3-203ENST00000417833 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1.01
TGFBR3-203ENST00000417833 ARID3CA6NKF2 412 aa21.33■■□□□ 1.01
TGFBR3-203ENST00000417833 HECW1Q76N89 1606 aa21.33■■□□□ 1
TGFBR3-203ENST00000417833 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
TGFBR3-203ENST00000417833 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
TGFBR3-203ENST00000417833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
TGFBR3-203ENST00000417833 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
TGFBR3-203ENST00000417833 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
TGFBR3-203ENST00000417833 KCNH8Q96L42 1107 aa21.29■■□□□ 1
TGFBR3-203ENST00000417833 CEP162Q5TB80 1403 aa21.29■■□□□ 1
TGFBR3-203ENST00000417833 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
TGFBR3-203ENST00000417833 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
TGFBR3-203ENST00000417833 FBXO41Q8TF61 875 aa21.26■□□□□ 0.99
TGFBR3-203ENST00000417833 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
TGFBR3-203ENST00000417833 CD109Q6YHK3 1445 aa21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 ABCA9Q8IUA7 1624 aa21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 ATP1B4Q9UN42 357 aaPredicted RBP21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 FYCO1Q9BQS8 1478 aa21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 COL17A1Q9UMD9 1497 aaPredicted RBP21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 MAGI3Q5TCQ9 1506 aa21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
TGFBR3-203ENST00000417833 LRRIQ1Q96JM4 1722 aa21.21■□□□□ 0.99
TGFBR3-203ENST00000417833 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
TGFBR3-203ENST00000417833 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
TGFBR3-203ENST00000417833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
TGFBR3-203ENST00000417833 TROQ12816 1431 aaPredicted RBP21.12■□□□□ 0.97
TGFBR3-203ENST00000417833 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
TGFBR3-203ENST00000417833 NEO1Q92859 1461 aa21.07■□□□□ 0.96
TGFBR3-203ENST00000417833 TTC37Q6PGP7 1564 aa21.06■□□□□ 0.96
TGFBR3-203ENST00000417833 VPS8Q8N3P4 1428 aa21.06■□□□□ 0.96
TGFBR3-203ENST00000417833 KIF14Q15058 1648 aa21.06■□□□□ 0.96
TGFBR3-203ENST00000417833 ARAP3Q8WWN8 1544 aa21.05■□□□□ 0.96
TGFBR3-203ENST00000417833 PLCH2O75038 1416 aa21.03■□□□□ 0.96
TGFBR3-203ENST00000417833 CFAP74Q9C0B2 1584 aa21.01■□□□□ 0.95
TGFBR3-203ENST00000417833 MYO5CQ9NQX4 1742 aa20.99■□□□□ 0.95
TGFBR3-203ENST00000417833 FANCAO15360 1455 aa20.99■□□□□ 0.95
TGFBR3-203ENST00000417833 AKNAQ7Z591 1439 aa20.96■□□□□ 0.95
TGFBR3-203ENST00000417833 EFCAB2Q5VUJ9 269 aa20.95■□□□□ 0.94
TGFBR3-203ENST00000417833 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
TGFBR3-203ENST00000417833 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms