RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 RIMBP3Q9UFD9 1639 aa32.35■■■□□ 2.77
SLC39A1-206ENST00000417348 KIAA0586Q9BVV6 1533 aa32.35■■■□□ 2.77
SLC39A1-206ENST00000417348 CSRNP3Q8WYN3 585 aa32.3■■■□□ 2.76
SLC39A1-206ENST00000417348 JPH4Q96JJ6 628 aa32.2■■■□□ 2.75
SLC39A1-206ENST00000417348 IQGAP2Q13576 1575 aa32.13■■■□□ 2.73
SLC39A1-206ENST00000417348 ARAP1Q96P48 1450 aa32.13■■■□□ 2.73
SLC39A1-206ENST00000417348 KIF21BO75037 1637 aa32.09■■■□□ 2.73
SLC39A1-206ENST00000417348 PRG4Q92954 1404 aaPredicted RBP32.09■■■□□ 2.73
SLC39A1-206ENST00000417348 CTTNBP2Q8WZ74 1663 aa32.05■■■□□ 2.72
SLC39A1-206ENST00000417348 UGGT2Q9NYU1 1516 aa32.03■■■□□ 2.72
SLC39A1-206ENST00000417348 CARMIL2Q6F5E8 1435 aa32■■■□□ 2.71
SLC39A1-206ENST00000417348 ERCC6L2Q5T890 1561 aa31.99■■■□□ 2.71
SLC39A1-206ENST00000417348 CYB5RLQ6IPT4 315 aa31.97■■■□□ 2.71
SLC39A1-206ENST00000417348 FAM9AQ8IZU1 332 aaPredicted RBP31.9■■■□□ 2.7
SLC39A1-206ENST00000417348 GOLGA3Q08378 1498 aa31.9■■■□□ 2.7
SLC39A1-206ENST00000417348 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
SLC39A1-206ENST00000417348 TNIKQ9UKE5 1360 aa31.85■■■□□ 2.69
SLC39A1-206ENST00000417348 KIAA0556O60303 1618 aa31.81■■■□□ 2.68
SLC39A1-206ENST00000417348 PTPRGP23470 1445 aa31.77■■■□□ 2.68
SLC39A1-206ENST00000417348 SAMD9Q5K651 1589 aa31.7■■■□□ 2.67
SLC39A1-206ENST00000417348 EFCAB5A4FU69 1503 aa31.67■■■□□ 2.66
SLC39A1-206ENST00000417348 UHRF1BP1LA0JNW5 1464 aa31.66■■■□□ 2.66
SLC39A1-206ENST00000417348 UBTFP17480 764 aaKnown RBP31.62■■■□□ 2.65
SLC39A1-206ENST00000417348 UACAQ9BZF9 1416 aa31.59■■■□□ 2.65
SLC39A1-206ENST00000417348 ADCY10Q96PN6 1610 aa31.58■■■□□ 2.65
SLC39A1-206ENST00000417348 ABCC2Q92887 1545 aa31.54■■■□□ 2.64
SLC39A1-206ENST00000417348 MAPKBP1O60336 1514 aa31.51■■■□□ 2.63
SLC39A1-206ENST00000417348 NPM1P06748 294 aaKnown RBP eCLIP31.51■■■□□ 2.63
SLC39A1-206ENST00000417348 ABCA8O94911 1581 aa31.48■■■□□ 2.63
SLC39A1-206ENST00000417348 KDM5BQ9UGL1 1544 aa31.46■■■□□ 2.63
SLC39A1-206ENST00000417348 PLB1Q6P1J6 1458 aa31.4■■■□□ 2.62
SLC39A1-206ENST00000417348 ARHGAP35Q9NRY4 1499 aa31.39■■■□□ 2.62
SLC39A1-206ENST00000417348 FHOD3Q2V2M9 1422 aa31.35■■■□□ 2.61
SLC39A1-206ENST00000417348 FMN1Q68DA7 1419 aa31.35■■■□□ 2.61
SLC39A1-206ENST00000417348 TTBK1Q5TCY1 1321 aaPredicted RBP31.32■■■□□ 2.6
SLC39A1-206ENST00000417348 P3H3Q8IVL6 736 aa31.32■■■□□ 2.6
SLC39A1-206ENST00000417348 RAPGEF6Q8TEU7 1601 aa31.31■■■□□ 2.6
SLC39A1-206ENST00000417348 ABCC10Q5T3U5 1492 aa31.28■■■□□ 2.6
SLC39A1-206ENST00000417348 ZCCHC11Q5TAX3 1644 aaKnown RBP31.27■■■□□ 2.6
SLC39A1-206ENST00000417348 EHMT2Q96KQ7 1210 aa31.27■■■□□ 2.6
SLC39A1-206ENST00000417348 CLIP1P30622 1438 aa31.24■■■□□ 2.59
SLC39A1-206ENST00000417348 RANGAP1P46060 587 aaPredicted RBP31.23■■■□□ 2.59
SLC39A1-206ENST00000417348 ASXL2Q76L83 1435 aa31.23■■■□□ 2.59
SLC39A1-206ENST00000417348 TRHP20396 242 aaPredicted RBP31.21■■■□□ 2.59
SLC39A1-206ENST00000417348 NUP153P49790 1475 aaKnown RBP31.19■■■□□ 2.58
SLC39A1-206ENST00000417348 DIP2BQ9P265 1576 aa31.18■■■□□ 2.58
SLC39A1-206ENST00000417348 ATP10BO94823 1461 aa31.18■■■□□ 2.58
SLC39A1-206ENST00000417348 GLI2P10070 1586 aa31.17■■■□□ 2.58
SLC39A1-206ENST00000417348 KIF13AQ9H1H9 1805 aa31.15■■■□□ 2.58
SLC39A1-206ENST00000417348 WDR7Q9Y4E6 1490 aa31.14■■■□□ 2.58
SLC39A1-206ENST00000417348 CEP162Q5TB80 1403 aa31.13■■■□□ 2.57
SLC39A1-206ENST00000417348 HECW1Q76N89 1606 aa31.12■■■□□ 2.57
SLC39A1-206ENST00000417348 CASKIN1Q8WXD9 1431 aa31.08■■■□□ 2.57
SLC39A1-206ENST00000417348 EPRSP07814 1512 aaKnown RBP31.08■■■□□ 2.57
SLC39A1-206ENST00000417348 FAM69CQ0P6D2 419 aa31.06■■■□□ 2.56
SLC39A1-206ENST00000417348 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
SLC39A1-206ENST00000417348 FYCO1Q9BQS8 1478 aa31.03■■■□□ 2.56
SLC39A1-206ENST00000417348 CCDC18Q5T9S5 1454 aa30.99■■■□□ 2.55
SLC39A1-206ENST00000417348 PLEKHD1A6NEE1 506 aa30.95■■■□□ 2.55
SLC39A1-206ENST00000417348 CDK11AQ9UQ88 783 aaPredicted RBP30.95■■■□□ 2.55
SLC39A1-206ENST00000417348 MAP3K4Q9Y6R4 1608 aa30.95■■■□□ 2.54
SLC39A1-206ENST00000417348 PCF11O94913 1555 aaKnown RBP30.94■■■□□ 2.54
SLC39A1-206ENST00000417348 CFAP43Q8NDM7 1665 aa30.93■■■□□ 2.54
SLC39A1-206ENST00000417348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.89■■■□□ 2.54
SLC39A1-206ENST00000417348 HNRNPUL2Q1KMD3 747 aaKnown RBP30.89■■■□□ 2.54
SLC39A1-206ENST00000417348 ABCA9Q8IUA7 1624 aa30.87■■■□□ 2.53
SLC39A1-206ENST00000417348 CDK13Q14004 1512 aaKnown RBP30.87■■■□□ 2.53
SLC39A1-206ENST00000417348 TEX14Q8IWB6 1497 aa30.86■■■□□ 2.53
SLC39A1-206ENST00000417348 MAGI3Q5TCQ9 1506 aa30.86■■■□□ 2.53
SLC39A1-206ENST00000417348 ARID3CA6NKF2 412 aa30.83■■■□□ 2.53
SLC39A1-206ENST00000417348 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
SLC39A1-206ENST00000417348 VPS8Q8N3P4 1428 aa30.82■■■□□ 2.52
SLC39A1-206ENST00000417348 CD109Q6YHK3 1445 aa30.81■■■□□ 2.52
SLC39A1-206ENST00000417348 PPRC1Q5VV67 1664 aaKnown RBP30.8■■■□□ 2.52
SLC39A1-206ENST00000417348 TROQ12816 1431 aaPredicted RBP30.8■■■□□ 2.52
SLC39A1-206ENST00000417348 KCNH8Q96L42 1107 aa30.79■■■□□ 2.52
SLC39A1-206ENST00000417348 ATP1B4Q9UN42 357 aaPredicted RBP30.78■■■□□ 2.52
SLC39A1-206ENST00000417348 PHLDB1Q86UU1 1377 aa30.76■■■□□ 2.51
SLC39A1-206ENST00000417348 TSPOAP1O95153 1857 aa30.72■■■□□ 2.51
SLC39A1-206ENST00000417348 MAP3K1Q13233 1512 aa30.7■■■□□ 2.51
SLC39A1-206ENST00000417348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.7■■■□□ 2.516e-6■■■■□ 21.5
SLC39A1-206ENST00000417348 KIF14Q15058 1648 aa30.69■■■□□ 2.5
SLC39A1-206ENST00000417348 ARAP3Q8WWN8 1544 aa30.69■■■□□ 2.5
SLC39A1-206ENST00000417348 NEO1Q92859 1461 aa30.66■■■□□ 2.5
SLC39A1-206ENST00000417348 CFAP74Q9C0B2 1584 aa30.61■■■□□ 2.49
SLC39A1-206ENST00000417348 KDM6BO15054 1643 aa30.61■■■□□ 2.49
SLC39A1-206ENST00000417348 PLCH2O75038 1416 aa30.6■■■□□ 2.49
SLC39A1-206ENST00000417348 TTC37Q6PGP7 1564 aa30.6■■■□□ 2.49
SLC39A1-206ENST00000417348 EHBP1L1Q8N3D4 1523 aa30.57■■■□□ 2.49
SLC39A1-206ENST00000417348 TIAM1Q13009 1591 aa30.57■■■□□ 2.48
SLC39A1-206ENST00000417348 MTUS2Q5JR59 1369 aa30.55■■■□□ 2.48
SLC39A1-206ENST00000417348 MYO5CQ9NQX4 1742 aa30.55■■■□□ 2.48
SLC39A1-206ENST00000417348 FANCAO15360 1455 aa30.51■■■□□ 2.48
SLC39A1-206ENST00000417348 COL17A1Q9UMD9 1497 aaPredicted RBP30.45■■■□□ 2.47
SLC39A1-206ENST00000417348 PREX2Q70Z35 1606 aa30.45■■■□□ 2.47
SLC39A1-206ENST00000417348 EFCAB2Q5VUJ9 269 aa30.45■■■□□ 2.47
SLC39A1-206ENST00000417348 LRRC9Q6ZRR7 1453 aa30.44■■■□□ 2.46
SLC39A1-206ENST00000417348 AKNAQ7Z591 1439 aa30.44■■■□□ 2.46
SLC39A1-206ENST00000417348 SUPT6HQ7KZ85 1726 aaKnown RBP30.4■■■□□ 2.46
SLC39A1-206ENST00000417348 APLP2Q06481 763 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms