RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 RUSC2Q8N2Y8 1516 aa38.1■■■■□ 3.69
COL9A2-203ENST00000417105 CUL7Q14999 1698 aa38.1■■■■□ 3.69
COL9A2-203ENST00000417105 CARMIL1Q5VZK9 1371 aa38■■■■□ 3.67
COL9A2-203ENST00000417105 KIAA0586Q9BVV6 1533 aa37.96■■■■□ 3.67
COL9A2-203ENST00000417105 RAPGEF2Q9Y4G8 1499 aa37.68■■■■□ 3.62
COL9A2-203ENST00000417105 IQGAP2Q13576 1575 aa37.65■■■■□ 3.62
COL9A2-203ENST00000417105 NPM1P06748 294 aaKnown RBP eCLIP37.61■■■■□ 3.61
COL9A2-203ENST00000417105 ADCY10Q96PN6 1610 aa37.6■■■■□ 3.61
COL9A2-203ENST00000417105 CARMIL2Q6F5E8 1435 aa37.59■■■■□ 3.61
COL9A2-203ENST00000417105 TTBK1Q5TCY1 1321 aaPredicted RBP37.59■■■■□ 3.61
COL9A2-203ENST00000417105 PTPRGP23470 1445 aa37.57■■■■□ 3.6
COL9A2-203ENST00000417105 TNIKQ9UKE5 1360 aa37.53■■■■□ 3.6
COL9A2-203ENST00000417105 KIF13AQ9H1H9 1805 aa37.47■■■■□ 3.59
COL9A2-203ENST00000417105 MAPKBP1O60336 1514 aa37.46■■■■□ 3.59
COL9A2-203ENST00000417105 DISP1Q96F81 1524 aa37.46■■■■□ 3.59
COL9A2-203ENST00000417105 UGGT2Q9NYU1 1516 aa37.41■■■■□ 3.58
COL9A2-203ENST00000417105 FAM69CQ0P6D2 419 aa37.41■■■■□ 3.58
COL9A2-203ENST00000417105 ABCC10Q5T3U5 1492 aa37.4■■■■□ 3.58
COL9A2-203ENST00000417105 PRXQ9BXM0 1461 aa37.38■■■■□ 3.57
COL9A2-203ENST00000417105 DIP2BQ9P265 1576 aa37.32■■■■□ 3.56
COL9A2-203ENST00000417105 CTTNBP2Q8WZ74 1663 aa37.31■■■■□ 3.56
COL9A2-203ENST00000417105 KIAA0556O60303 1618 aa37.3■■■■□ 3.56
COL9A2-203ENST00000417105 ABCC2Q92887 1545 aa37.3■■■■□ 3.56
COL9A2-203ENST00000417105 UACAQ9BZF9 1416 aa37.28■■■■□ 3.56
COL9A2-203ENST00000417105 UHRF1BP1LA0JNW5 1464 aa37.26■■■■□ 3.55
COL9A2-203ENST00000417105 CSRNP3Q8WYN3 585 aa37.21■■■■□ 3.55
COL9A2-203ENST00000417105 ASXL2Q76L83 1435 aa37.15■■■■□ 3.54
COL9A2-203ENST00000417105 GOLGA3Q08378 1498 aa37.14■■■■□ 3.54
COL9A2-203ENST00000417105 PLB1Q6P1J6 1458 aa37.11■■■■□ 3.53
COL9A2-203ENST00000417105 KDM5BQ9UGL1 1544 aa37.1■■■■□ 3.53
COL9A2-203ENST00000417105 EEA1Q15075 1411 aa37.07■■■■□ 3.52
COL9A2-203ENST00000417105 TSPOAP1O95153 1857 aa37.05■■■■□ 3.52
COL9A2-203ENST00000417105 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
COL9A2-203ENST00000417105 ZCCHC11Q5TAX3 1644 aaKnown RBP37.02■■■■□ 3.52
COL9A2-203ENST00000417105 P3H3Q8IVL6 736 aa36.96■■■■□ 3.51
COL9A2-203ENST00000417105 GLI2P10070 1586 aa36.95■■■■□ 3.51
COL9A2-203ENST00000417105 ABCA8O94911 1581 aa36.94■■■■□ 3.5
COL9A2-203ENST00000417105 EPRSP07814 1512 aaKnown RBP36.92■■■■□ 3.5
COL9A2-203ENST00000417105 KDM6BO15054 1643 aa36.9■■■■□ 3.5
COL9A2-203ENST00000417105 AEBP2Q6ZN18 517 aaPredicted RBP36.88■■■■□ 3.49
COL9A2-203ENST00000417105 CHIC1Q5VXU3 224 aa36.87■■■■□ 3.49
COL9A2-203ENST00000417105 WDR7Q9Y4E6 1490 aa36.84■■■■□ 3.49
COL9A2-203ENST00000417105 PPRC1Q5VV67 1664 aaKnown RBP36.83■■■■□ 3.49
COL9A2-203ENST00000417105 SAMD9Q5K651 1589 aa36.82■■■■□ 3.48
COL9A2-203ENST00000417105 RANGAP1P46060 587 aaPredicted RBP36.81■■■■□ 3.48
COL9A2-203ENST00000417105 MAP3K4Q9Y6R4 1608 aa36.77■■■■□ 3.48
COL9A2-203ENST00000417105 KIF21BO75037 1637 aa36.75■■■■□ 3.47
COL9A2-203ENST00000417105 ARID3CA6NKF2 412 aa36.75■■■■□ 3.47
COL9A2-203ENST00000417105 KCNH8Q96L42 1107 aa36.72■■■■□ 3.47
COL9A2-203ENST00000417105 EHMT2Q96KQ7 1210 aa36.66■■■■□ 3.46
COL9A2-203ENST00000417105 ATP10BO94823 1461 aa36.66■■■■□ 3.46
COL9A2-203ENST00000417105 TEX14Q8IWB6 1497 aa36.66■■■■□ 3.46
COL9A2-203ENST00000417105 FHOD3Q2V2M9 1422 aa36.65■■■■□ 3.46
COL9A2-203ENST00000417105 RAPGEF6Q8TEU7 1601 aa36.62■■■■□ 3.45
COL9A2-203ENST00000417105 COL17A1Q9UMD9 1497 aaPredicted RBP36.6■■■■□ 3.45
COL9A2-203ENST00000417105 CD109Q6YHK3 1445 aa36.59■■■■□ 3.45
COL9A2-203ENST00000417105 CFAP43Q8NDM7 1665 aa36.55■■■■□ 3.44
COL9A2-203ENST00000417105 UBTFP17480 764 aaKnown RBP36.55■■■■□ 3.44
COL9A2-203ENST00000417105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.52■■■■□ 3.44
COL9A2-203ENST00000417105 HNRNPUL2Q1KMD3 747 aaKnown RBP36.52■■■■□ 3.44
COL9A2-203ENST00000417105 EFCAB5A4FU69 1503 aa36.52■■■■□ 3.44
COL9A2-203ENST00000417105 MAGI3Q5TCQ9 1506 aa36.51■■■■□ 3.44
COL9A2-203ENST00000417105 NUP153P49790 1475 aaKnown RBP36.5■■■■□ 3.43
COL9A2-203ENST00000417105 KDM4FA0A1W2PPD8 638 aa36.42■■■■□ 3.42
COL9A2-203ENST00000417105 ABCA9Q8IUA7 1624 aa36.36■■■■□ 3.41
COL9A2-203ENST00000417105 PLEKHD1A6NEE1 506 aa36.29■■■■□ 3.4
COL9A2-203ENST00000417105 ARHGAP35Q9NRY4 1499 aa36.29■■■■□ 3.4
COL9A2-203ENST00000417105 CDK13Q14004 1512 aaKnown RBP36.21■■■■□ 3.39
COL9A2-203ENST00000417105 FMN1Q68DA7 1419 aa36.21■■■■□ 3.39
COL9A2-203ENST00000417105 ARAP3Q8WWN8 1544 aa36.21■■■■□ 3.39
COL9A2-203ENST00000417105 ADGRL1O94910 1474 aa36.2■■■■□ 3.39
COL9A2-203ENST00000417105 ATP1B4Q9UN42 357 aaPredicted RBP36.2■■■■□ 3.39
COL9A2-203ENST00000417105 PHLDB1Q86UU1 1377 aa36.16■■■■□ 3.38
COL9A2-203ENST00000417105 NEO1Q92859 1461 aa36.14■■■■□ 3.38
COL9A2-203ENST00000417105 HECW1Q76N89 1606 aa36.11■■■■□ 3.37
COL9A2-203ENST00000417105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.09■■■■□ 3.37
COL9A2-203ENST00000417105 RAPGEF3O95398 923 aa36.08■■■■□ 3.37
COL9A2-203ENST00000417105 TTC37Q6PGP7 1564 aa36.04■■■■□ 3.36
COL9A2-203ENST00000417105 FANCAO15360 1455 aa35.99■■■■□ 3.35
COL9A2-203ENST00000417105 AKNAQ7Z591 1439 aa35.97■■■■□ 3.35
COL9A2-203ENST00000417105 CDK11AQ9UQ88 783 aaPredicted RBP35.96■■■■□ 3.35
COL9A2-203ENST00000417105 FRMPD1Q5SYB0 1578 aa35.95■■■■□ 3.35
COL9A2-203ENST00000417105 CFAP74Q9C0B2 1584 aa35.92■■■■□ 3.34
COL9A2-203ENST00000417105 DENND4BO75064 1496 aaPredicted RBP35.91■■■■□ 3.34
COL9A2-203ENST00000417105 LRRIQ1Q96JM4 1722 aa35.89■■■■□ 3.34
COL9A2-203ENST00000417105 PLCH2O75038 1416 aa35.87■■■■□ 3.33
COL9A2-203ENST00000417105 PCF11O94913 1555 aaKnown RBP35.87■■■■□ 3.33
COL9A2-203ENST00000417105 CASKIN1Q8WXD9 1431 aa35.87■■■■□ 3.33
COL9A2-203ENST00000417105 CLIP1P30622 1438 aa35.86■■■■□ 3.33
COL9A2-203ENST00000417105 TROQ12816 1431 aaPredicted RBP35.86■■■■□ 3.33
COL9A2-203ENST00000417105 KIF14Q15058 1648 aa35.85■■■■□ 3.33
COL9A2-203ENST00000417105 RICTORQ6R327 1708 aa35.83■■■■□ 3.33
COL9A2-203ENST00000417105 CCDC18Q5T9S5 1454 aa35.77■■■■□ 3.32
COL9A2-203ENST00000417105 MYO5CQ9NQX4 1742 aa35.77■■■■□ 3.32
COL9A2-203ENST00000417105 EFCAB2Q5VUJ9 269 aa35.76■■■■□ 3.32
COL9A2-203ENST00000417105 SCAPERQ9BY12 1400 aa35.75■■■■□ 3.31
COL9A2-203ENST00000417105 ARHGEF40Q8TER5 1519 aa35.74■■■■□ 3.31
COL9A2-203ENST00000417105 FYCO1Q9BQS8 1478 aa35.73■■■■□ 3.31
COL9A2-203ENST00000417105 ARID4BQ4LE39 1312 aaPredicted RBP35.73■■■■□ 3.31
COL9A2-203ENST00000417105 ZMYM4Q5VZL5 1548 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms