RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 IGF1RP08069 1367 aa37.83■■■■□ 3.65
APTR-202ENST00000416650 JPH4Q96JJ6 628 aa37.82■■■■□ 3.64
APTR-202ENST00000416650 KIAA0586Q9BVV6 1533 aa37.75■■■■□ 3.63
APTR-202ENST00000416650 KIF13AQ9H1H9 1805 aa37.72■■■■□ 3.63
APTR-202ENST00000416650 ADCY10Q96PN6 1610 aa37.61■■■■□ 3.61
APTR-202ENST00000416650 CARMIL1Q5VZK9 1371 aa37.6■■■■□ 3.61
APTR-202ENST00000416650 MAPKBP1O60336 1514 aa37.51■■■■□ 3.59
APTR-202ENST00000416650 IQGAP2Q13576 1575 aa37.51■■■■□ 3.59
APTR-202ENST00000416650 DIP2BQ9P265 1576 aa37.4■■■■□ 3.58
APTR-202ENST00000416650 ABCC10Q5T3U5 1492 aa37.39■■■■□ 3.58
APTR-202ENST00000416650 NPM1P06748 294 aaKnown RBP eCLIP37.36■■■■□ 3.57
APTR-202ENST00000416650 RAPGEF2Q9Y4G8 1499 aa37.35■■■■□ 3.57
APTR-202ENST00000416650 CARMIL2Q6F5E8 1435 aa37.35■■■■□ 3.57
APTR-202ENST00000416650 PTPRGP23470 1445 aa37.31■■■■□ 3.56
APTR-202ENST00000416650 TNIKQ9UKE5 1360 aa37.29■■■■□ 3.56
APTR-202ENST00000416650 CTTNBP2Q8WZ74 1663 aa37.28■■■■□ 3.56
APTR-202ENST00000416650 DISP1Q96F81 1524 aa37.26■■■■□ 3.55
APTR-202ENST00000416650 UGGT2Q9NYU1 1516 aa37.23■■■■□ 3.55
APTR-202ENST00000416650 FAM69CQ0P6D2 419 aa37.22■■■■□ 3.55
APTR-202ENST00000416650 TSPOAP1O95153 1857 aa37.2■■■■□ 3.55
APTR-202ENST00000416650 ABCC2Q92887 1545 aa37.19■■■■□ 3.54
APTR-202ENST00000416650 KIAA0556O60303 1618 aa37.18■■■■□ 3.54
APTR-202ENST00000416650 TTBK1Q5TCY1 1321 aaPredicted RBP37.15■■■■□ 3.54
APTR-202ENST00000416650 UHRF1BP1LA0JNW5 1464 aa37.13■■■■□ 3.54
APTR-202ENST00000416650 UACAQ9BZF9 1416 aa37.07■■■■□ 3.52
APTR-202ENST00000416650 KDM6BO15054 1643 aa37.03■■■■□ 3.52
APTR-202ENST00000416650 ASXL2Q76L83 1435 aa37.01■■■■□ 3.51
APTR-202ENST00000416650 PRXQ9BXM0 1461 aa37.01■■■■□ 3.51
APTR-202ENST00000416650 PLB1Q6P1J6 1458 aa37■■■■□ 3.51
APTR-202ENST00000416650 ZCCHC11Q5TAX3 1644 aaKnown RBP36.99■■■■□ 3.51
APTR-202ENST00000416650 AEBP2Q6ZN18 517 aaPredicted RBP36.98■■■■□ 3.51
APTR-202ENST00000416650 GLI2P10070 1586 aa36.98■■■■□ 3.51
APTR-202ENST00000416650 KDM5BQ9UGL1 1544 aa36.97■■■■□ 3.51
APTR-202ENST00000416650 PPRC1Q5VV67 1664 aaKnown RBP36.96■■■■□ 3.51
APTR-202ENST00000416650 GOLGA3Q08378 1498 aa36.91■■■■□ 3.5
APTR-202ENST00000416650 MAP3K4Q9Y6R4 1608 aa36.85■■■■□ 3.49
APTR-202ENST00000416650 EPRSP07814 1512 aaKnown RBP36.81■■■■□ 3.48
APTR-202ENST00000416650 ABCA8O94911 1581 aa36.79■■■■□ 3.48
APTR-202ENST00000416650 WDR7Q9Y4E6 1490 aa36.71■■■■□ 3.47
APTR-202ENST00000416650 SAMD9Q5K651 1589 aa36.65■■■■□ 3.46
APTR-202ENST00000416650 EEA1Q15075 1411 aa36.63■■■■□ 3.45
APTR-202ENST00000416650 TEX14Q8IWB6 1497 aa36.62■■■■□ 3.45
APTR-202ENST00000416650 CSRNP3Q8WYN3 585 aa36.62■■■■□ 3.45
APTR-202ENST00000416650 CFAP43Q8NDM7 1665 aa36.61■■■■□ 3.45
APTR-202ENST00000416650 COL17A1Q9UMD9 1497 aaPredicted RBP36.5■■■■□ 3.43
APTR-202ENST00000416650 RAPGEF6Q8TEU7 1601 aa36.47■■■■□ 3.43
APTR-202ENST00000416650 KIF21BO75037 1637 aa36.45■■■■□ 3.42
APTR-202ENST00000416650 P3H3Q8IVL6 736 aa36.44■■■■□ 3.42
APTR-202ENST00000416650 MAGI3Q5TCQ9 1506 aa36.44■■■■□ 3.42
APTR-202ENST00000416650 CD109Q6YHK3 1445 aa36.4■■■■□ 3.42
APTR-202ENST00000416650 ATP10BO94823 1461 aa36.39■■■■□ 3.42
APTR-202ENST00000416650 KDM4FA0A1W2PPD8 638 aa36.39■■■■□ 3.42
APTR-202ENST00000416650 FAM9AQ8IZU1 332 aaPredicted RBP36.39■■■■□ 3.42
APTR-202ENST00000416650 KCNH8Q96L42 1107 aa36.35■■■■□ 3.41
APTR-202ENST00000416650 ABCA9Q8IUA7 1624 aa36.32■■■■□ 3.4
APTR-202ENST00000416650 ARID3CA6NKF2 412 aa36.3■■■■□ 3.4
APTR-202ENST00000416650 ADGRL1O94910 1474 aa36.28■■■■□ 3.4
APTR-202ENST00000416650 EFCAB5A4FU69 1503 aa36.28■■■■□ 3.4
APTR-202ENST00000416650 FHOD3Q2V2M9 1422 aa36.27■■■■□ 3.4
APTR-202ENST00000416650 NUP153P49790 1475 aaKnown RBP36.25■■■■□ 3.39
APTR-202ENST00000416650 RANGAP1P46060 587 aaPredicted RBP36.19■■■■□ 3.38
APTR-202ENST00000416650 ARAP3Q8WWN8 1544 aa36.15■■■■□ 3.38
APTR-202ENST00000416650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.07■■■■□ 3.36
APTR-202ENST00000416650 HNRNPUL2Q1KMD3 747 aaKnown RBP36.07■■■■□ 3.36
APTR-202ENST00000416650 CHIC1Q5VXU3 224 aa36.05■■■■□ 3.36
APTR-202ENST00000416650 NEO1Q92859 1461 aa36.02■■■■□ 3.36
APTR-202ENST00000416650 PHLDB1Q86UU1 1377 aa36.02■■■■□ 3.36
APTR-202ENST00000416650 FRMPD1Q5SYB0 1578 aa35.96■■■■□ 3.35
APTR-202ENST00000416650 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
APTR-202ENST00000416650 CFAP74Q9C0B2 1584 aa35.93■■■■□ 3.34
APTR-202ENST00000416650 CDK13Q14004 1512 aaKnown RBP35.93■■■■□ 3.34
APTR-202ENST00000416650 HECW1Q76N89 1606 aa35.92■■■■□ 3.34
APTR-202ENST00000416650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.92■■■■□ 3.34
APTR-202ENST00000416650 UBTFP17480 764 aaKnown RBP35.91■■■■□ 3.34
APTR-202ENST00000416650 EHMT2Q96KQ7 1210 aa35.9■■■■□ 3.34
APTR-202ENST00000416650 ARHGAP35Q9NRY4 1499 aa35.9■■■■□ 3.34
APTR-202ENST00000416650 PLEKHD1A6NEE1 506 aa35.89■■■■□ 3.34
APTR-202ENST00000416650 RICTORQ6R327 1708 aa35.88■■■■□ 3.33
APTR-202ENST00000416650 FMN1Q68DA7 1419 aa35.86■■■■□ 3.33
APTR-202ENST00000416650 FANCAO15360 1455 aa35.8■■■■□ 3.32
APTR-202ENST00000416650 RAPGEF3O95398 923 aa35.8■■■■□ 3.32
APTR-202ENST00000416650 HECW2Q9P2P5 1572 aa35.79■■■■□ 3.32
APTR-202ENST00000416650 LRRIQ1Q96JM4 1722 aa35.79■■■■□ 3.32
APTR-202ENST00000416650 ARHGEF40Q8TER5 1519 aa35.77■■■■□ 3.32
APTR-202ENST00000416650 ADAMTSL3P82987 1691 aa35.76■■■■□ 3.32
APTR-202ENST00000416650 MYO5CQ9NQX4 1742 aa35.75■■■■□ 3.31
APTR-202ENST00000416650 AKNAQ7Z591 1439 aa35.74■■■■□ 3.31
APTR-202ENST00000416650 DENND4BO75064 1496 aaPredicted RBP35.73■■■■□ 3.31
APTR-202ENST00000416650 BCORL1Q5H9F3 1711 aa35.72■■■■□ 3.31
APTR-202ENST00000416650 ZMYM4Q5VZL5 1548 aa35.69■■■■□ 3.3
APTR-202ENST00000416650 KIF14Q15058 1648 aa35.67■■■■□ 3.3
APTR-202ENST00000416650 ATP1B4Q9UN42 357 aaPredicted RBP35.63■■■■□ 3.29
APTR-202ENST00000416650 PCF11O94913 1555 aaKnown RBP35.62■■■■□ 3.29
APTR-202ENST00000416650 MADDQ8WXG6 1647 aa35.61■■■■□ 3.29
APTR-202ENST00000416650 PLCH2O75038 1416 aa35.61■■■■□ 3.29
APTR-202ENST00000416650 ZFYVE16Q7Z3T8 1539 aa35.57■■■■□ 3.29
APTR-202ENST00000416650 PTPRMP28827 1452 aa35.56■■■■□ 3.28
APTR-202ENST00000416650 TROQ12816 1431 aaPredicted RBP35.56■■■■□ 3.28
APTR-202ENST00000416650 SIGLEC1Q9BZZ2 1709 aa35.55■■■■□ 3.28
APTR-202ENST00000416650 CDK11AQ9UQ88 783 aaPredicted RBP35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms