RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
SNX30-202ENST00000416585 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
SNX30-202ENST00000416585 NPM1P06748 294 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNX30-202ENST00000416585 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
SNX30-202ENST00000416585 AEBP2Q6ZN18 517 aaPredicted RBP19.73■□□□□ 0.75
SNX30-202ENST00000416585 ADCY10Q96PN6 1610 aa19.71■□□□□ 0.75
SNX30-202ENST00000416585 IGF1RP08069 1367 aa19.7■□□□□ 0.74
SNX30-202ENST00000416585 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
SNX30-202ENST00000416585 TSPOAP1O95153 1857 aa19.67■□□□□ 0.74
SNX30-202ENST00000416585 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
SNX30-202ENST00000416585 IQGAP2Q13576 1575 aa19.65■□□□□ 0.74
SNX30-202ENST00000416585 DIP2BQ9P265 1576 aa19.64■□□□□ 0.73
SNX30-202ENST00000416585 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
SNX30-202ENST00000416585 CARMIL2Q6F5E8 1435 aa19.62■□□□□ 0.73
SNX30-202ENST00000416585 FAM69CQ0P6D2 419 aa19.6■□□□□ 0.73
SNX30-202ENST00000416585 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
SNX30-202ENST00000416585 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
SNX30-202ENST00000416585 PTPRGP23470 1445 aa19.56■□□□□ 0.72
SNX30-202ENST00000416585 KDM6BO15054 1643 aa19.54■□□□□ 0.72
SNX30-202ENST00000416585 TNIKQ9UKE5 1360 aa19.54■□□□□ 0.72
SNX30-202ENST00000416585 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
SNX30-202ENST00000416585 ABCC2Q92887 1545 aa19.49■□□□□ 0.71
SNX30-202ENST00000416585 KIAA0556O60303 1618 aa19.46■□□□□ 0.71
SNX30-202ENST00000416585 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
SNX30-202ENST00000416585 UHRF1BP1LA0JNW5 1464 aa19.43■□□□□ 0.7
SNX30-202ENST00000416585 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
SNX30-202ENST00000416585 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
SNX30-202ENST00000416585 PLB1Q6P1J6 1458 aa19.42■□□□□ 0.7
SNX30-202ENST00000416585 ZCCHC11Q5TAX3 1644 aaKnown RBP19.41■□□□□ 0.7
SNX30-202ENST00000416585 ASXL2Q76L83 1435 aa19.4■□□□□ 0.7
SNX30-202ENST00000416585 GLI2P10070 1586 aa19.4■□□□□ 0.7
SNX30-202ENST00000416585 PPRC1Q5VV67 1664 aaKnown RBP19.38■□□□□ 0.69
SNX30-202ENST00000416585 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
SNX30-202ENST00000416585 MAP3K4Q9Y6R4 1608 aa19.34■□□□□ 0.69
SNX30-202ENST00000416585 KDM5BQ9UGL1 1544 aa19.34■□□□□ 0.69
SNX30-202ENST00000416585 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
SNX30-202ENST00000416585 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
SNX30-202ENST00000416585 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
SNX30-202ENST00000416585 CFAP43Q8NDM7 1665 aa19.26■□□□□ 0.67
SNX30-202ENST00000416585 WDR7Q9Y4E6 1490 aa19.24■□□□□ 0.67
SNX30-202ENST00000416585 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
SNX30-202ENST00000416585 ABCA8O94911 1581 aa19.23■□□□□ 0.67
SNX30-202ENST00000416585 KDM4FA0A1W2PPD8 638 aa19.13■□□□□ 0.65
SNX30-202ENST00000416585 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
SNX30-202ENST00000416585 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
SNX30-202ENST00000416585 CD109Q6YHK3 1445 aa19.11■□□□□ 0.65
SNX30-202ENST00000416585 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
SNX30-202ENST00000416585 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
SNX30-202ENST00000416585 MAGI3Q5TCQ9 1506 aa19.1■□□□□ 0.65
SNX30-202ENST00000416585 EEA1Q15075 1411 aa19.09■□□□□ 0.65
SNX30-202ENST00000416585 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
SNX30-202ENST00000416585 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
SNX30-202ENST00000416585 COL17A1Q9UMD9 1497 aaPredicted RBP19.08■□□□□ 0.64
SNX30-202ENST00000416585 ARID3CA6NKF2 412 aa19.04■□□□□ 0.64
SNX30-202ENST00000416585 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
SNX30-202ENST00000416585 KIF21BO75037 1637 aa19.01■□□□□ 0.63
SNX30-202ENST00000416585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
SNX30-202ENST00000416585 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
SNX30-202ENST00000416585 ATP10BO94823 1461 aa19.01■□□□□ 0.63
SNX30-202ENST00000416585 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
SNX30-202ENST00000416585 EFCAB5A4FU69 1503 aa18.95■□□□□ 0.62
SNX30-202ENST00000416585 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
SNX30-202ENST00000416585 FHOD3Q2V2M9 1422 aa18.92■□□□□ 0.62
SNX30-202ENST00000416585 CFAP74Q9C0B2 1584 aa18.92■□□□□ 0.62
SNX30-202ENST00000416585 PHLDB1Q86UU1 1377 aa18.92■□□□□ 0.62
SNX30-202ENST00000416585 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
SNX30-202ENST00000416585 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.62
SNX30-202ENST00000416585 NEO1Q92859 1461 aa18.89■□□□□ 0.61
SNX30-202ENST00000416585 PLEKHD1A6NEE1 506 aa18.84■□□□□ 0.61
SNX30-202ENST00000416585 RICTORQ6R327 1708 aa18.83■□□□□ 0.6
SNX30-202ENST00000416585 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
SNX30-202ENST00000416585 FRMPD1Q5SYB0 1578 aa18.81■□□□□ 0.6
SNX30-202ENST00000416585 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
SNX30-202ENST00000416585 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
SNX30-202ENST00000416585 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
SNX30-202ENST00000416585 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
SNX30-202ENST00000416585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNX30-202ENST00000416585 ADAMTSL3P82987 1691 aa18.79■□□□□ 0.6
SNX30-202ENST00000416585 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
SNX30-202ENST00000416585 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
SNX30-202ENST00000416585 ARHGEF40Q8TER5 1519 aa18.77■□□□□ 0.6
SNX30-202ENST00000416585 FANCAO15360 1455 aa18.77■□□□□ 0.59
SNX30-202ENST00000416585 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
SNX30-202ENST00000416585 DENND4BO75064 1496 aaPredicted RBP18.76■□□□□ 0.59
SNX30-202ENST00000416585 FMN1Q68DA7 1419 aa18.75■□□□□ 0.59
SNX30-202ENST00000416585 ARID4BQ4LE39 1312 aaPredicted RBP18.74■□□□□ 0.59
SNX30-202ENST00000416585 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
SNX30-202ENST00000416585 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
SNX30-202ENST00000416585 MADDQ8WXG6 1647 aa18.73■□□□□ 0.59
SNX30-202ENST00000416585 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
SNX30-202ENST00000416585 KIF14Q15058 1648 aa18.71■□□□□ 0.58
SNX30-202ENST00000416585 PTPRMP28827 1452 aa18.7■□□□□ 0.58
SNX30-202ENST00000416585 ZMYM4Q5VZL5 1548 aa18.69■□□□□ 0.58
SNX30-202ENST00000416585 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
SNX30-202ENST00000416585 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
SNX30-202ENST00000416585 LRRIQ1Q96JM4 1722 aa18.68■□□□□ 0.58
SNX30-202ENST00000416585 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
SNX30-202ENST00000416585 FER1L4A9Z1Z3 1794 aa18.67■□□□□ 0.58
SNX30-202ENST00000416585 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
SNX30-202ENST00000416585 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 281.4 ms