RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
LINC01398-201ENST00000416581 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
LINC01398-201ENST00000416581 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
LINC01398-201ENST00000416581 IGF1RP08069 1367 aa23.28■■□□□ 1.32
LINC01398-201ENST00000416581 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
LINC01398-201ENST00000416581 KIF13AQ9H1H9 1805 aa23.23■■□□□ 1.31
LINC01398-201ENST00000416581 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
LINC01398-201ENST00000416581 CARMIL1Q5VZK9 1371 aa23.17■■□□□ 1.3
LINC01398-201ENST00000416581 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
LINC01398-201ENST00000416581 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
LINC01398-201ENST00000416581 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
LINC01398-201ENST00000416581 IQGAP2Q13576 1575 aa23.1■■□□□ 1.29
LINC01398-201ENST00000416581 DIP2BQ9P265 1576 aa23.1■■□□□ 1.29
LINC01398-201ENST00000416581 PTPRGP23470 1445 aa23.07■■□□□ 1.28
LINC01398-201ENST00000416581 TNIKQ9UKE5 1360 aa23.06■■□□□ 1.28
LINC01398-201ENST00000416581 FAM69CQ0P6D2 419 aa23.06■■□□□ 1.28
LINC01398-201ENST00000416581 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
LINC01398-201ENST00000416581 ABCC2Q92887 1545 aa22.99■■□□□ 1.27
LINC01398-201ENST00000416581 UHRF1BP1LA0JNW5 1464 aa22.97■■□□□ 1.27
LINC01398-201ENST00000416581 UGGT2Q9NYU1 1516 aa22.95■■□□□ 1.26
LINC01398-201ENST00000416581 KDM6BO15054 1643 aa22.94■■□□□ 1.26
LINC01398-201ENST00000416581 PLB1Q6P1J6 1458 aa22.94■■□□□ 1.26
LINC01398-201ENST00000416581 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
LINC01398-201ENST00000416581 DISP1Q96F81 1524 aa22.91■■□□□ 1.26
LINC01398-201ENST00000416581 GLI2P10070 1586 aa22.89■■□□□ 1.26
LINC01398-201ENST00000416581 KIAA0556O60303 1618 aa22.88■■□□□ 1.25
LINC01398-201ENST00000416581 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
LINC01398-201ENST00000416581 TSPOAP1O95153 1857 aa22.87■■□□□ 1.25
LINC01398-201ENST00000416581 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
LINC01398-201ENST00000416581 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
LINC01398-201ENST00000416581 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
LINC01398-201ENST00000416581 KDM5BQ9UGL1 1544 aa22.83■■□□□ 1.25
LINC01398-201ENST00000416581 ZCCHC11Q5TAX3 1644 aaKnown RBP22.77■■□□□ 1.24
LINC01398-201ENST00000416581 TEX14Q8IWB6 1497 aa22.76■■□□□ 1.23
LINC01398-201ENST00000416581 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
LINC01398-201ENST00000416581 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
LINC01398-201ENST00000416581 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
LINC01398-201ENST00000416581 PPRC1Q5VV67 1664 aaKnown RBP22.72■■□□□ 1.23
LINC01398-201ENST00000416581 ILDR1Q86SU0 546 aaPredicted RBP22.72■■□□□ 1.23
LINC01398-201ENST00000416581 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
LINC01398-201ENST00000416581 WDR7Q9Y4E6 1490 aa22.68■■□□□ 1.22
LINC01398-201ENST00000416581 ABCA8O94911 1581 aa22.66■■□□□ 1.22
LINC01398-201ENST00000416581 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
LINC01398-201ENST00000416581 EEA1Q15075 1411 aa22.6■■□□□ 1.21
LINC01398-201ENST00000416581 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
LINC01398-201ENST00000416581 KDM4FA0A1W2PPD8 638 aa22.53■■□□□ 1.2
LINC01398-201ENST00000416581 CD109Q6YHK3 1445 aa22.52■■□□□ 1.2
LINC01398-201ENST00000416581 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
LINC01398-201ENST00000416581 SAMD9Q5K651 1589 aa22.5■■□□□ 1.19
LINC01398-201ENST00000416581 COL17A1Q9UMD9 1497 aaPredicted RBP22.48■■□□□ 1.19
LINC01398-201ENST00000416581 ADGRL1O94910 1474 aa22.47■■□□□ 1.19
LINC01398-201ENST00000416581 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
LINC01398-201ENST00000416581 PHLDB1Q86UU1 1377 aa22.42■■□□□ 1.18
LINC01398-201ENST00000416581 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
LINC01398-201ENST00000416581 ATP10BO94823 1461 aa22.41■■□□□ 1.18
LINC01398-201ENST00000416581 ABCA9Q8IUA7 1624 aa22.4■■□□□ 1.18
LINC01398-201ENST00000416581 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
LINC01398-201ENST00000416581 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
LINC01398-201ENST00000416581 KIF21BO75037 1637 aa22.35■■□□□ 1.17
LINC01398-201ENST00000416581 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
LINC01398-201ENST00000416581 NEO1Q92859 1461 aa22.31■■□□□ 1.16
LINC01398-201ENST00000416581 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
LINC01398-201ENST00000416581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
LINC01398-201ENST00000416581 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
LINC01398-201ENST00000416581 FHOD3Q2V2M9 1422 aa22.25■■□□□ 1.15
LINC01398-201ENST00000416581 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
LINC01398-201ENST00000416581 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
LINC01398-201ENST00000416581 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
LINC01398-201ENST00000416581 HECW2Q9P2P5 1572 aa22.17■■□□□ 1.14
LINC01398-201ENST00000416581 RANGAP1P46060 587 aaPredicted RBP22.14■■□□□ 1.13
LINC01398-201ENST00000416581 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
LINC01398-201ENST00000416581 FANCAO15360 1455 aa22.11■■□□□ 1.13
LINC01398-201ENST00000416581 DENND4BO75064 1496 aaPredicted RBP22.11■■□□□ 1.13
LINC01398-201ENST00000416581 HECW1Q76N89 1606 aa22.11■■□□□ 1.13
LINC01398-201ENST00000416581 FRMPD1Q5SYB0 1578 aa22.11■■□□□ 1.13
LINC01398-201ENST00000416581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
LINC01398-201ENST00000416581 ARHGEF40Q8TER5 1519 aa22.1■■□□□ 1.13
LINC01398-201ENST00000416581 ADAMTSL3P82987 1691 aa22.08■■□□□ 1.13
LINC01398-201ENST00000416581 RICTORQ6R327 1708 aa22.08■■□□□ 1.12
LINC01398-201ENST00000416581 AKNAQ7Z591 1439 aa22.07■■□□□ 1.12
LINC01398-201ENST00000416581 RAPGEF3O95398 923 aa22.07■■□□□ 1.12
LINC01398-201ENST00000416581 UBTFP17480 764 aaKnown RBP22.07■■□□□ 1.12
LINC01398-201ENST00000416581 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
LINC01398-201ENST00000416581 ZMYM4Q5VZL5 1548 aa22.06■■□□□ 1.12
LINC01398-201ENST00000416581 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
LINC01398-201ENST00000416581 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
LINC01398-201ENST00000416581 MAGI2Q86UL8 1455 aa22.04■■□□□ 1.12
LINC01398-201ENST00000416581 PTPRMP28827 1452 aa22.03■■□□□ 1.12
LINC01398-201ENST00000416581 CDK13Q14004 1512 aaKnown RBP22.02■■□□□ 1.12
LINC01398-201ENST00000416581 POGZQ7Z3K3 1410 aa22.01■■□□□ 1.11
LINC01398-201ENST00000416581 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
LINC01398-201ENST00000416581 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
LINC01398-201ENST00000416581 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
LINC01398-201ENST00000416581 PLCH2O75038 1416 aa21.98■■□□□ 1.11
LINC01398-201ENST00000416581 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
LINC01398-201ENST00000416581 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
LINC01398-201ENST00000416581 KIF14Q15058 1648 aa21.98■■□□□ 1.11
LINC01398-201ENST00000416581 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
LINC01398-201ENST00000416581 CLIP1P30622 1438 aa21.97■■□□□ 1.11
LINC01398-201ENST00000416581 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms