RNA–Protein interactions for RNA: ENST00000415738.2

PRDM8-202, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 3,124 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-202ENST00000415738 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
PRDM8-202ENST00000415738 MIER1Q8N108 512 aa28.34■■■□□ 2.13
PRDM8-202ENST00000415738 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
PRDM8-202ENST00000415738 HNRNPUL2Q1KMD3 747 aaKnown RBP28.29■■■□□ 2.12
PRDM8-202ENST00000415738 ZNF316A6NFI3 1004 aaPredicted RBP28.29■■■□□ 2.12
PRDM8-202ENST00000415738 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
PRDM8-202ENST00000415738 TSHZ2Q9NRE2 1034 aa28.26■■■□□ 2.11
PRDM8-202ENST00000415738 WDR97A6NE52 1622 aa28.23■■■□□ 2.11
PRDM8-202ENST00000415738 P3H3Q8IVL6 736 aa28.2■■■□□ 2.1
PRDM8-202ENST00000415738 CUL7Q14999 1698 aa28.19■■■□□ 2.1
PRDM8-202ENST00000415738 SUPT16HQ9Y5B9 1047 aaKnown RBP28.19■■■□□ 2.1
PRDM8-202ENST00000415738 GAPVD1Q14C86 1478 aa28.18■■■□□ 2.1
PRDM8-202ENST00000415738 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
PRDM8-202ENST00000415738 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
PRDM8-202ENST00000415738 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
PRDM8-202ENST00000415738 FHOD3Q2V2M9 1422 aa28.04■■■□□ 2.08
PRDM8-202ENST00000415738 ATP1B4Q9UN42 357 aaPredicted RBP28.03■■■□□ 2.08
PRDM8-202ENST00000415738 CTTNBP2Q8WZ74 1663 aa28.01■■■□□ 2.07
PRDM8-202ENST00000415738 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
PRDM8-202ENST00000415738 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.07
PRDM8-202ENST00000415738 TIAM1Q13009 1591 aa27.96■■■□□ 2.07
PRDM8-202ENST00000415738 EFCAB5A4FU69 1503 aa27.95■■■□□ 2.07
PRDM8-202ENST00000415738 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
PRDM8-202ENST00000415738 RRBP1Q9P2E9 1410 aaKnown RBP27.9■■■□□ 2.06
PRDM8-202ENST00000415738 MAP3K1Q13233 1512 aa27.89■■■□□ 2.06
PRDM8-202ENST00000415738 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
PRDM8-202ENST00000415738 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
PRDM8-202ENST00000415738 LRRC9Q6ZRR7 1453 aa27.87■■■□□ 2.05
PRDM8-202ENST00000415738 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
PRDM8-202ENST00000415738 WDR62O43379 1518 aa27.85■■■□□ 2.05
PRDM8-202ENST00000415738 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
PRDM8-202ENST00000415738 ITGAEP38570 1179 aa27.83■■■□□ 2.05
PRDM8-202ENST00000415738 IFT140Q96RY7 1462 aa27.83■■■□□ 2.05
PRDM8-202ENST00000415738 FYCO1Q9BQS8 1478 aa27.82■■■□□ 2.04
PRDM8-202ENST00000415738 CASKIN1Q8WXD9 1431 aa27.81■■■□□ 2.04
PRDM8-202ENST00000415738 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
PRDM8-202ENST00000415738 FMN1Q68DA7 1419 aa27.8■■■□□ 2.04
PRDM8-202ENST00000415738 CFAP43Q8NDM7 1665 aa27.78■■■□□ 2.04
PRDM8-202ENST00000415738 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
PRDM8-202ENST00000415738 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
PRDM8-202ENST00000415738 SAMD9Q5K651 1589 aa27.75■■■□□ 2.03
PRDM8-202ENST00000415738 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
PRDM8-202ENST00000415738 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
PRDM8-202ENST00000415738 BCANQ96GW7 911 aa27.7■■■□□ 2.02
PRDM8-202ENST00000415738 FAM50AQ14320 339 aaKnown RBP27.67■■■□□ 2.02
PRDM8-202ENST00000415738 IQGAP2Q13576 1575 aa27.64■■■□□ 2.02
PRDM8-202ENST00000415738 THOC2Q8NI27 1593 aaKnown RBP27.64■■■□□ 2.02
PRDM8-202ENST00000415738 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
PRDM8-202ENST00000415738 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
PRDM8-202ENST00000415738 MTUS2Q5JR59 1369 aa27.6■■■□□ 2.01
PRDM8-202ENST00000415738 ERICH6Q7L0X2 663 aa27.59■■■□□ 2.01
PRDM8-202ENST00000415738 LRRIQ1Q96JM4 1722 aa27.53■■■□□ 2
PRDM8-202ENST00000415738 RBM19Q9Y4C8 960 aaKnown RBP27.53■■■□□ 2
PRDM8-202ENST00000415738 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
PRDM8-202ENST00000415738 FBLN2P98095 1184 aa27.49■■□□□ 1.99
PRDM8-202ENST00000415738 RAB3GAP2Q9H2M9 1393 aa27.49■■□□□ 1.99
PRDM8-202ENST00000415738 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
PRDM8-202ENST00000415738 KIAA0586Q9BVV6 1533 aa27.47■■□□□ 1.99
PRDM8-202ENST00000415738 ARID3CA6NKF2 412 aa27.46■■□□□ 1.99
PRDM8-202ENST00000415738 UGGT2Q9NYU1 1516 aa27.46■■□□□ 1.99
PRDM8-202ENST00000415738 MAGI1Q96QZ7 1491 aaPredicted RBP27.43■■□□□ 1.98
PRDM8-202ENST00000415738 FGD6Q6ZV73 1430 aa27.43■■□□□ 1.98
PRDM8-202ENST00000415738 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
PRDM8-202ENST00000415738 NCOA2Q15596 1464 aa27.41■■□□□ 1.98
PRDM8-202ENST00000415738 MSH5O43196 834 aa27.41■■□□□ 1.98
PRDM8-202ENST00000415738 HECW1Q76N89 1606 aa27.4■■□□□ 1.98
PRDM8-202ENST00000415738 CCDC18Q5T9S5 1454 aa27.39■■□□□ 1.98
PRDM8-202ENST00000415738 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
PRDM8-202ENST00000415738 EHBP1L1Q8N3D4 1523 aa27.38■■□□□ 1.97
PRDM8-202ENST00000415738 ANO8Q9HCE9 1232 aaPredicted RBP27.36■■□□□ 1.97
PRDM8-202ENST00000415738 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
PRDM8-202ENST00000415738 DISP1Q96F81 1524 aa27.36■■□□□ 1.97
PRDM8-202ENST00000415738 EPRSP07814 1512 aaKnown RBP27.35■■□□□ 1.97
PRDM8-202ENST00000415738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.35■■□□□ 1.97
PRDM8-202ENST00000415738 CDK13Q14004 1512 aaKnown RBP27.35■■□□□ 1.97
PRDM8-202ENST00000415738 SUPT6HQ7KZ85 1726 aaKnown RBP27.35■■□□□ 1.97
PRDM8-202ENST00000415738 FKBP8Q14318 412 aa27.34■■□□□ 1.97
PRDM8-202ENST00000415738 KIAA0556O60303 1618 aa27.34■■□□□ 1.97
PRDM8-202ENST00000415738 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.97
PRDM8-202ENST00000415738 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
PRDM8-202ENST00000415738 PTPRKQ15262 1439 aa27.23■■□□□ 1.95
PRDM8-202ENST00000415738 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
PRDM8-202ENST00000415738 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
PRDM8-202ENST00000415738 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
PRDM8-202ENST00000415738 KCNH8Q96L42 1107 aa27.21■■□□□ 1.95
PRDM8-202ENST00000415738 NUP160Q12769 1436 aa27.2■■□□□ 1.95
PRDM8-202ENST00000415738 PTPN23Q9H3S7 1636 aa27.18■■□□□ 1.94
PRDM8-202ENST00000415738 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
PRDM8-202ENST00000415738 RAPGEF6Q8TEU7 1601 aa27.17■■□□□ 1.94
PRDM8-202ENST00000415738 CARMIL2Q6F5E8 1435 aa27.14■■□□□ 1.93
PRDM8-202ENST00000415738 PLB1Q6P1J6 1458 aa27.11■■□□□ 1.93
PRDM8-202ENST00000415738 SIN3AQ96ST3 1273 aa27.11■■□□□ 1.93
PRDM8-202ENST00000415738 CHIC2Q9UKJ5 165 aa27.1■■□□□ 1.93
PRDM8-202ENST00000415738 HFM1A2PYH4 1435 aa27.1■■□□□ 1.93
PRDM8-202ENST00000415738 DEKP35659 375 aaKnown RBP27.1■■□□□ 1.93
PRDM8-202ENST00000415738 CDK11AQ9UQ88 783 aaPredicted RBP27.09■■□□□ 1.93
PRDM8-202ENST00000415738 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
PRDM8-202ENST00000415738 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
PRDM8-202ENST00000415738 NAIPQ13075 1403 aa27.05■■□□□ 1.92
PRDM8-202ENST00000415738 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms