RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
RBM28-202ENST00000415472 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
RBM28-202ENST00000415472 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
RBM28-202ENST00000415472 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
RBM28-202ENST00000415472 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
RBM28-202ENST00000415472 MAP3K1Q13233 1512 aa17.17■□□□□ 0.34
RBM28-202ENST00000415472 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
RBM28-202ENST00000415472 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
RBM28-202ENST00000415472 ATP1B4Q9UN42 357 aaPredicted RBP17.15■□□□□ 0.34
RBM28-202ENST00000415472 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
RBM28-202ENST00000415472 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
RBM28-202ENST00000415472 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
RBM28-202ENST00000415472 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
RBM28-202ENST00000415472 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
RBM28-202ENST00000415472 MAPKBP1O60336 1514 aa17.08■□□□□ 0.33
RBM28-202ENST00000415472 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.33
RBM28-202ENST00000415472 CUL7Q14999 1698 aa17.07■□□□□ 0.32
RBM28-202ENST00000415472 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
RBM28-202ENST00000415472 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
RBM28-202ENST00000415472 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
RBM28-202ENST00000415472 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
RBM28-202ENST00000415472 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
RBM28-202ENST00000415472 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
RBM28-202ENST00000415472 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
RBM28-202ENST00000415472 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
RBM28-202ENST00000415472 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
RBM28-202ENST00000415472 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
RBM28-202ENST00000415472 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■■□ 25.2
RBM28-202ENST00000415472 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
RBM28-202ENST00000415472 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
RBM28-202ENST00000415472 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
RBM28-202ENST00000415472 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
RBM28-202ENST00000415472 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
RBM28-202ENST00000415472 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
RBM28-202ENST00000415472 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
RBM28-202ENST00000415472 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
RBM28-202ENST00000415472 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
RBM28-202ENST00000415472 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
RBM28-202ENST00000415472 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
RBM28-202ENST00000415472 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
RBM28-202ENST00000415472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.87■□□□□ 0.29
RBM28-202ENST00000415472 NCOA2Q15596 1464 aa16.83■□□□□ 0.29
RBM28-202ENST00000415472 KCNH8Q96L42 1107 aa16.82■□□□□ 0.28
RBM28-202ENST00000415472 MAGI3Q5TCQ9 1506 aa16.82■□□□□ 0.28
RBM28-202ENST00000415472 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
RBM28-202ENST00000415472 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
RBM28-202ENST00000415472 CCDC18Q5T9S5 1454 aa16.79■□□□□ 0.28
RBM28-202ENST00000415472 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
RBM28-202ENST00000415472 HFM1A2PYH4 1435 aa16.77■□□□□ 0.27
RBM28-202ENST00000415472 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
RBM28-202ENST00000415472 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
RBM28-202ENST00000415472 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
RBM28-202ENST00000415472 PPP1R15AO75807 674 aaPredicted RBP16.76■□□□□ 0.27
RBM28-202ENST00000415472 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
RBM28-202ENST00000415472 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
RBM28-202ENST00000415472 NAIPQ13075 1403 aa16.75■□□□□ 0.27
RBM28-202ENST00000415472 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
RBM28-202ENST00000415472 UGGT2Q9NYU1 1516 aa16.74■□□□□ 0.27
RBM28-202ENST00000415472 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
RBM28-202ENST00000415472 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
RBM28-202ENST00000415472 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
RBM28-202ENST00000415472 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
RBM28-202ENST00000415472 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
RBM28-202ENST00000415472 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
RBM28-202ENST00000415472 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
RBM28-202ENST00000415472 CDK13Q14004 1512 aaKnown RBP16.71■□□□□ 0.27
RBM28-202ENST00000415472 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
RBM28-202ENST00000415472 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
RBM28-202ENST00000415472 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
RBM28-202ENST00000415472 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
RBM28-202ENST00000415472 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
RBM28-202ENST00000415472 KDM6BO15054 1643 aa16.65■□□□□ 0.26
RBM28-202ENST00000415472 WDR62O43379 1518 aa16.65■□□□□ 0.26
RBM28-202ENST00000415472 TCOF1Q13428 1488 aaKnown RBP16.64■□□□□ 0.25
RBM28-202ENST00000415472 DENND4BO75064 1496 aaPredicted RBP16.63■□□□□ 0.25
RBM28-202ENST00000415472 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
RBM28-202ENST00000415472 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
RBM28-202ENST00000415472 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
RBM28-202ENST00000415472 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
RBM28-202ENST00000415472 GCC2Q8IWJ2 1684 aa16.58■□□□□ 0.24
RBM28-202ENST00000415472 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
RBM28-202ENST00000415472 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
RBM28-202ENST00000415472 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
RBM28-202ENST00000415472 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
RBM28-202ENST00000415472 FOXD1Q16676 465 aa16.55■□□□□ 0.24
RBM28-202ENST00000415472 NUP153P49790 1475 aaKnown RBP16.54■□□□□ 0.24
RBM28-202ENST00000415472 MIA2Q96PC5 1412 aa16.54■□□□□ 0.24
RBM28-202ENST00000415472 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
RBM28-202ENST00000415472 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
RBM28-202ENST00000415472 AKNAQ7Z591 1439 aa16.52■□□□□ 0.23
RBM28-202ENST00000415472 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.23
RBM28-202ENST00000415472 ANP32CO43423 234 aa16.49■□□□□ 0.23
RBM28-202ENST00000415472 DAPK1P53355 1430 aa16.49■□□□□ 0.23
RBM28-202ENST00000415472 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
RBM28-202ENST00000415472 ABCC5O15440 1437 aa16.48■□□□□ 0.23
RBM28-202ENST00000415472 PRG4Q92954 1404 aaPredicted RBP16.47■□□□□ 0.23
RBM28-202ENST00000415472 CCER2I3L3R5 266 aa16.46■□□□□ 0.23
RBM28-202ENST00000415472 CEP170Q5SW79 1584 aa16.46■□□□□ 0.22
RBM28-202ENST00000415472 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
RBM28-202ENST00000415472 L3MBTL2Q969R5 705 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms