RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
LMBR1-204ENST00000415428 KDM6BO15054 1643 aa12.4□□□□□ -0.42
LMBR1-204ENST00000415428 CFAP43Q8NDM7 1665 aa12.33□□□□□ -0.44
LMBR1-204ENST00000415428 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
LMBR1-204ENST00000415428 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
LMBR1-204ENST00000415428 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
LMBR1-204ENST00000415428 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
LMBR1-204ENST00000415428 ABCC2Q92887 1545 aa12.24□□□□□ -0.45
LMBR1-204ENST00000415428 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
LMBR1-204ENST00000415428 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.452e-6■■■■■ 59.6
LMBR1-204ENST00000415428 UGGT2Q9NYU1 1516 aa12.23□□□□□ -0.45
LMBR1-204ENST00000415428 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
LMBR1-204ENST00000415428 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
LMBR1-204ENST00000415428 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
LMBR1-204ENST00000415428 TEX14Q8IWB6 1497 aa12.18□□□□□ -0.46
LMBR1-204ENST00000415428 ZCCHC11Q5TAX3 1644 aaKnown RBP12.17□□□□□ -0.46
LMBR1-204ENST00000415428 ADGRL1O94910 1474 aa12.16□□□□□ -0.46
LMBR1-204ENST00000415428 PRG4Q92954 1404 aaPredicted RBP12.15□□□□□ -0.46
LMBR1-204ENST00000415428 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
LMBR1-204ENST00000415428 EPRSP07814 1512 aaKnown RBP12.14□□□□□ -0.47
LMBR1-204ENST00000415428 ABCA8O94911 1581 aa12.12□□□□□ -0.47
LMBR1-204ENST00000415428 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
LMBR1-204ENST00000415428 ABCA9Q8IUA7 1624 aa12.11□□□□□ -0.47
LMBR1-204ENST00000415428 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
LMBR1-204ENST00000415428 PHLDB1Q86UU1 1377 aa12.1□□□□□ -0.47
LMBR1-204ENST00000415428 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
LMBR1-204ENST00000415428 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
LMBR1-204ENST00000415428 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
LMBR1-204ENST00000415428 IQGAP2Q13576 1575 aa12.09□□□□□ -0.47
LMBR1-204ENST00000415428 KIAA0556O60303 1618 aa12.09□□□□□ -0.47
LMBR1-204ENST00000415428 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
LMBR1-204ENST00000415428 DISP1Q96F81 1524 aa12.08□□□□□ -0.48
LMBR1-204ENST00000415428 FRMPD1Q5SYB0 1578 aa12.06□□□□□ -0.48
LMBR1-204ENST00000415428 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
LMBR1-204ENST00000415428 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
LMBR1-204ENST00000415428 CFAP74Q9C0B2 1584 aa12.04□□□□□ -0.48
LMBR1-204ENST00000415428 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
LMBR1-204ENST00000415428 TSPOAP1O95153 1857 aa12□□□□□ -0.49
LMBR1-204ENST00000415428 RICTORQ6R327 1708 aa12□□□□□ -0.49
LMBR1-204ENST00000415428 TTC37Q6PGP7 1564 aa12□□□□□ -0.49
LMBR1-204ENST00000415428 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
LMBR1-204ENST00000415428 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
LMBR1-204ENST00000415428 ASXL2Q76L83 1435 aa11.99□□□□□ -0.49
LMBR1-204ENST00000415428 WDR7Q9Y4E6 1490 aa11.97□□□□□ -0.49
LMBR1-204ENST00000415428 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
LMBR1-204ENST00000415428 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.5
LMBR1-204ENST00000415428 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
LMBR1-204ENST00000415428 NEO1Q92859 1461 aa11.95□□□□□ -0.5
LMBR1-204ENST00000415428 KIF21BO75037 1637 aa11.94□□□□□ -0.5
LMBR1-204ENST00000415428 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
LMBR1-204ENST00000415428 IGF1RP08069 1367 aa11.92□□□□□ -0.5
LMBR1-204ENST00000415428 PREX1Q8TCU6 1659 aa11.92□□□□□ -0.5
LMBR1-204ENST00000415428 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
LMBR1-204ENST00000415428 FER1L4A9Z1Z3 1794 aa11.91□□□□□ -0.5
LMBR1-204ENST00000415428 LMTK3Q96Q04 1460 aa11.9□□□□□ -0.5
LMBR1-204ENST00000415428 CARMIL2Q6F5E8 1435 aa11.89□□□□□ -0.51
LMBR1-204ENST00000415428 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
LMBR1-204ENST00000415428 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
LMBR1-204ENST00000415428 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
LMBR1-204ENST00000415428 ARHGEF12Q9NZN5 1544 aa11.85□□□□□ -0.51
LMBR1-204ENST00000415428 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
LMBR1-204ENST00000415428 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
LMBR1-204ENST00000415428 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
LMBR1-204ENST00000415428 PTPRMP28827 1452 aa11.83□□□□□ -0.52
LMBR1-204ENST00000415428 ZNF142P52746 1687 aaPredicted RBP11.83□□□□□ -0.52
LMBR1-204ENST00000415428 STRCQ7RTU9 1775 aa11.83□□□□□ -0.52
LMBR1-204ENST00000415428 PTPRGP23470 1445 aa11.83□□□□□ -0.52
LMBR1-204ENST00000415428 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
LMBR1-204ENST00000415428 MADDQ8WXG6 1647 aa11.81□□□□□ -0.52
LMBR1-204ENST00000415428 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
LMBR1-204ENST00000415428 EFCAB5A4FU69 1503 aa11.78□□□□□ -0.52
LMBR1-204ENST00000415428 KDM5CP41229 1560 aa11.77□□□□□ -0.53
LMBR1-204ENST00000415428 FBLN2P98095 1184 aa11.76□□□□□ -0.53
LMBR1-204ENST00000415428 FAM135AQ9P2D6 1515 aa11.76□□□□□ -0.53
LMBR1-204ENST00000415428 AGLP35573 1532 aa11.75□□□□□ -0.53
LMBR1-204ENST00000415428 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
LMBR1-204ENST00000415428 LTBP4Q8N2S1 1624 aa11.73□□□□□ -0.53
LMBR1-204ENST00000415428 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
LMBR1-204ENST00000415428 PTPRTO14522 1441 aa11.73□□□□□ -0.53
LMBR1-204ENST00000415428 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
LMBR1-204ENST00000415428 RIMS1Q86UR5 1692 aaKnown RBP11.72□□□□□ -0.53
LMBR1-204ENST00000415428 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
LMBR1-204ENST00000415428 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
LMBR1-204ENST00000415428 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
LMBR1-204ENST00000415428 CD109Q6YHK3 1445 aa11.67□□□□□ -0.54
LMBR1-204ENST00000415428 FANCAO15360 1455 aa11.65□□□□□ -0.55
LMBR1-204ENST00000415428 ZFYVE16Q7Z3T8 1539 aa11.63□□□□□ -0.55
LMBR1-204ENST00000415428 ATP10BO94823 1461 aa11.62□□□□□ -0.55
LMBR1-204ENST00000415428 C3P01024 1663 aa11.61□□□□□ -0.55
LMBR1-204ENST00000415428 MYO5CQ9NQX4 1742 aa11.59□□□□□ -0.55
LMBR1-204ENST00000415428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■□□ 16.9
LMBR1-204ENST00000415428 ITSN2Q9NZM3 1697 aa11.58□□□□□ -0.56
LMBR1-204ENST00000415428 PLXNC1O60486 1568 aa11.58□□□□□ -0.56
LMBR1-204ENST00000415428 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
LMBR1-204ENST00000415428 HECW1Q76N89 1606 aa11.57□□□□□ -0.56
LMBR1-204ENST00000415428 NPATQ14207 1427 aa11.56□□□□□ -0.56
LMBR1-204ENST00000415428 DIP2CQ9Y2E4 1556 aa11.55□□□□□ -0.56
LMBR1-204ENST00000415428 SETD1BQ9UPS6 1966 aaKnown RBP11.54□□□□□ -0.56
LMBR1-204ENST00000415428 POGZQ7Z3K3 1410 aa11.54□□□□□ -0.56
LMBR1-204ENST00000415428 NUP153P49790 1475 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms