RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 GOLGA3Q08378 1498 aa22.4■■□□□ 1.18
PHTF2-204ENST00000415251 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.17
PHTF2-204ENST00000415251 KIAA0586Q9BVV6 1533 aa22.32■■□□□ 1.16
PHTF2-204ENST00000415251 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
PHTF2-204ENST00000415251 JPH4Q96JJ6 628 aa22.3■■□□□ 1.16
PHTF2-204ENST00000415251 CTTNBP2Q8WZ74 1663 aa22.27■■□□□ 1.16
PHTF2-204ENST00000415251 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
PHTF2-204ENST00000415251 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
PHTF2-204ENST00000415251 PRG4Q92954 1404 aaPredicted RBP22.17■■□□□ 1.14
PHTF2-204ENST00000415251 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
PHTF2-204ENST00000415251 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
PHTF2-204ENST00000415251 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
PHTF2-204ENST00000415251 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
PHTF2-204ENST00000415251 UGGT2Q9NYU1 1516 aa22.14■■□□□ 1.13
PHTF2-204ENST00000415251 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
PHTF2-204ENST00000415251 DISP1Q96F81 1524 aa22.11■■□□□ 1.13
PHTF2-204ENST00000415251 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
PHTF2-204ENST00000415251 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
PHTF2-204ENST00000415251 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
PHTF2-204ENST00000415251 CLIP1P30622 1438 aa22.06■■□□□ 1.12
PHTF2-204ENST00000415251 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
PHTF2-204ENST00000415251 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
PHTF2-204ENST00000415251 RIMBP3CA6NJZ7 1639 aa22.03■■□□□ 1.12
PHTF2-204ENST00000415251 RIMBP3BA6NNM3 1639 aa22.03■■□□□ 1.12
PHTF2-204ENST00000415251 RIMBP3Q9UFD9 1639 aa22.03■■□□□ 1.12
PHTF2-204ENST00000415251 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
PHTF2-204ENST00000415251 FHOD3Q2V2M9 1422 aa22.02■■□□□ 1.11
PHTF2-204ENST00000415251 CYB5RLQ6IPT4 315 aa21.97■■□□□ 1.11
PHTF2-204ENST00000415251 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
PHTF2-204ENST00000415251 PTPRGP23470 1445 aa21.96■■□□□ 1.11
PHTF2-204ENST00000415251 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
PHTF2-204ENST00000415251 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
PHTF2-204ENST00000415251 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.08
PHTF2-204ENST00000415251 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
PHTF2-204ENST00000415251 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
PHTF2-204ENST00000415251 UACAQ9BZF9 1416 aa21.8■■□□□ 1.08
PHTF2-204ENST00000415251 ABCA8O94911 1581 aa21.77■■□□□ 1.08
PHTF2-204ENST00000415251 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
PHTF2-204ENST00000415251 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
PHTF2-204ENST00000415251 ADCY10Q96PN6 1610 aa21.74■■□□□ 1.07
PHTF2-204ENST00000415251 ABCC2Q92887 1545 aa21.72■■□□□ 1.07
PHTF2-204ENST00000415251 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
PHTF2-204ENST00000415251 CASKIN1Q8WXD9 1431 aa21.7■■□□□ 1.07
PHTF2-204ENST00000415251 NUP153P49790 1475 aaKnown RBP21.7■■□□□ 1.06
PHTF2-204ENST00000415251 UHRF1BP1LA0JNW5 1464 aa21.7■■□□□ 1.06
PHTF2-204ENST00000415251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
PHTF2-204ENST00000415251 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
PHTF2-204ENST00000415251 ATP10BO94823 1461 aa21.66■■□□□ 1.06
PHTF2-204ENST00000415251 NPM1P06748 294 aaKnown RBP eCLIP21.66■■□□□ 1.06
PHTF2-204ENST00000415251 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
PHTF2-204ENST00000415251 LRRIQ1Q96JM4 1722 aa21.64■■□□□ 1.05
PHTF2-204ENST00000415251 CDK13Q14004 1512 aaKnown RBP21.63■■□□□ 1.05
PHTF2-204ENST00000415251 KDM5BQ9UGL1 1544 aa21.63■■□□□ 1.05
PHTF2-204ENST00000415251 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
PHTF2-204ENST00000415251 EPRSP07814 1512 aaKnown RBP21.62■■□□□ 1.05
PHTF2-204ENST00000415251 ZCCHC11Q5TAX3 1644 aaKnown RBP21.59■■□□□ 1.05
PHTF2-204ENST00000415251 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
PHTF2-204ENST00000415251 APLP2Q06481 763 aa21.54■■□□□ 1.04
PHTF2-204ENST00000415251 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.04
PHTF2-204ENST00000415251 PLEKHD1A6NEE1 506 aa21.52■■□□□ 1.04
PHTF2-204ENST00000415251 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
PHTF2-204ENST00000415251 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
PHTF2-204ENST00000415251 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
PHTF2-204ENST00000415251 KCNH8Q96L42 1107 aa21.52■■□□□ 1.03
PHTF2-204ENST00000415251 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
PHTF2-204ENST00000415251 MAGI3Q5TCQ9 1506 aa21.48■■□□□ 1.03
PHTF2-204ENST00000415251 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
PHTF2-204ENST00000415251 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
PHTF2-204ENST00000415251 WDR7Q9Y4E6 1490 aa21.44■■□□□ 1.02
PHTF2-204ENST00000415251 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
PHTF2-204ENST00000415251 CFAP43Q8NDM7 1665 aa21.43■■□□□ 1.02
PHTF2-204ENST00000415251 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
PHTF2-204ENST00000415251 TROQ12816 1431 aaPredicted RBP21.41■■□□□ 1.02
PHTF2-204ENST00000415251 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
PHTF2-204ENST00000415251 FAM69CQ0P6D2 419 aa21.38■■□□□ 1.01
PHTF2-204ENST00000415251 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
PHTF2-204ENST00000415251 KIF14Q15058 1648 aa21.36■■□□□ 1.01
PHTF2-204ENST00000415251 ABCC10Q5T3U5 1492 aa21.35■■□□□ 1.01
PHTF2-204ENST00000415251 EHBP1L1Q8N3D4 1523 aa21.33■■□□□ 1.01
PHTF2-204ENST00000415251 DIP2BQ9P265 1576 aa21.31■■□□□ 1
PHTF2-204ENST00000415251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.31■■□□□ 1
PHTF2-204ENST00000415251 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
PHTF2-204ENST00000415251 NCOA2Q15596 1464 aa21.28■■□□□ 1
PHTF2-204ENST00000415251 TTC37Q6PGP7 1564 aa21.27■■□□□ 1
PHTF2-204ENST00000415251 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
PHTF2-204ENST00000415251 GLI2P10070 1586 aa21.25■□□□□ 0.99
PHTF2-204ENST00000415251 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
PHTF2-204ENST00000415251 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
PHTF2-204ENST00000415251 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
PHTF2-204ENST00000415251 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
PHTF2-204ENST00000415251 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
PHTF2-204ENST00000415251 GPATCH8Q9UKJ3 1502 aaKnown RBP21.2■□□□□ 0.98
PHTF2-204ENST00000415251 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
PHTF2-204ENST00000415251 PLCH2O75038 1416 aa21.18■□□□□ 0.98
PHTF2-204ENST00000415251 CDC42BPAQ5VT25 1732 aa21.18■□□□□ 0.98
PHTF2-204ENST00000415251 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
PHTF2-204ENST00000415251 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
PHTF2-204ENST00000415251 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
PHTF2-204ENST00000415251 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
PHTF2-204ENST00000415251 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms