RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
SCN4B-202ENST00000415030 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
SCN4B-202ENST00000415030 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
SCN4B-202ENST00000415030 KCNH8Q96L42 1107 aa15.92■□□□□ 0.14
SCN4B-202ENST00000415030 ERICH6BQ5W0A0 696 aa15.91■□□□□ 0.14
SCN4B-202ENST00000415030 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
SCN4B-202ENST00000415030 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
SCN4B-202ENST00000415030 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
SCN4B-202ENST00000415030 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
SCN4B-202ENST00000415030 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
SCN4B-202ENST00000415030 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
SCN4B-202ENST00000415030 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
SCN4B-202ENST00000415030 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
SCN4B-202ENST00000415030 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.12
SCN4B-202ENST00000415030 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCN4B-202ENST00000415030 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
SCN4B-202ENST00000415030 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCN4B-202ENST00000415030 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
SCN4B-202ENST00000415030 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
SCN4B-202ENST00000415030 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
SCN4B-202ENST00000415030 CUX2O14529 1486 aa15.78■□□□□ 0.12
SCN4B-202ENST00000415030 CARMIL1Q5VZK9 1371 aa15.78■□□□□ 0.12
SCN4B-202ENST00000415030 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
SCN4B-202ENST00000415030 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
SCN4B-202ENST00000415030 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
SCN4B-202ENST00000415030 MRS2Q9HD23 443 aa15.78■□□□□ 0.12
SCN4B-202ENST00000415030 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
SCN4B-202ENST00000415030 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
SCN4B-202ENST00000415030 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
SCN4B-202ENST00000415030 ZBTB47Q9UFB7 747 aaPredicted RBP15.71■□□□□ 0.11
SCN4B-202ENST00000415030 NOP58Q9Y2X3 529 aaKnown RBP15.7■□□□□ 0.1
SCN4B-202ENST00000415030 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
SCN4B-202ENST00000415030 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
SCN4B-202ENST00000415030 CNGB1Q14028 1251 aaPredicted RBP15.68■□□□□ 0.1
SCN4B-202ENST00000415030 NBR1Q14596 966 aa15.68■□□□□ 0.1
SCN4B-202ENST00000415030 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
SCN4B-202ENST00000415030 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
SCN4B-202ENST00000415030 MAP3K1Q13233 1512 aa15.65■□□□□ 0.1
SCN4B-202ENST00000415030 PHLDB1Q86UU1 1377 aa15.65■□□□□ 0.1
SCN4B-202ENST00000415030 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
SCN4B-202ENST00000415030 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
SCN4B-202ENST00000415030 TIAM1Q13009 1591 aa15.63■□□□□ 0.09
SCN4B-202ENST00000415030 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
SCN4B-202ENST00000415030 FMN1Q68DA7 1419 aa15.61■□□□□ 0.09
SCN4B-202ENST00000415030 IGF1RP08069 1367 aa15.6■□□□□ 0.09
SCN4B-202ENST00000415030 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
SCN4B-202ENST00000415030 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
SCN4B-202ENST00000415030 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
SCN4B-202ENST00000415030 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
SCN4B-202ENST00000415030 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.09
SCN4B-202ENST00000415030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.58■□□□□ 0.08
SCN4B-202ENST00000415030 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
SCN4B-202ENST00000415030 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
SCN4B-202ENST00000415030 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
SCN4B-202ENST00000415030 ESF1Q9H501 851 aaKnown RBP15.55■□□□□ 0.08
SCN4B-202ENST00000415030 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
SCN4B-202ENST00000415030 NPM2Q86SE8 214 aaKnown RBP15.55■□□□□ 0.08
SCN4B-202ENST00000415030 CUX1P39880 1505 aa15.54■□□□□ 0.08
SCN4B-202ENST00000415030 FHOD3Q2V2M9 1422 aa15.54■□□□□ 0.08
SCN4B-202ENST00000415030 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
SCN4B-202ENST00000415030 BICRAQ9NZM4 1560 aa15.52■□□□□ 0.08
SCN4B-202ENST00000415030 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.07
SCN4B-202ENST00000415030 MSH5O43196 834 aa15.51■□□□□ 0.07
SCN4B-202ENST00000415030 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
SCN4B-202ENST00000415030 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
SCN4B-202ENST00000415030 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
SCN4B-202ENST00000415030 FYCO1Q9BQS8 1478 aa15.49■□□□□ 0.07
SCN4B-202ENST00000415030 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
SCN4B-202ENST00000415030 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
SCN4B-202ENST00000415030 CFTRP13569 1480 aa15.48■□□□□ 0.07
SCN4B-202ENST00000415030 CNTLNQ9NXG0 1405 aa15.48■□□□□ 0.07
SCN4B-202ENST00000415030 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
SCN4B-202ENST00000415030 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
SCN4B-202ENST00000415030 HFM1A2PYH4 1435 aa15.46■□□□□ 0.06
SCN4B-202ENST00000415030 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.06
SCN4B-202ENST00000415030 DDRGK1Q96HY6 314 aa15.45■□□□□ 0.06
SCN4B-202ENST00000415030 WASHC2AQ641Q2 1341 aa15.45■□□□□ 0.06
SCN4B-202ENST00000415030 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
SCN4B-202ENST00000415030 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
SCN4B-202ENST00000415030 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
SCN4B-202ENST00000415030 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
SCN4B-202ENST00000415030 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
SCN4B-202ENST00000415030 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
SCN4B-202ENST00000415030 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
SCN4B-202ENST00000415030 CCDC7Q96M83 1385 aa15.41■□□□□ 0.06
SCN4B-202ENST00000415030 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
SCN4B-202ENST00000415030 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
SCN4B-202ENST00000415030 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCN4B-202ENST00000415030 NEFMP07197 916 aa15.38■□□□□ 0.05
SCN4B-202ENST00000415030 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
SCN4B-202ENST00000415030 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
SCN4B-202ENST00000415030 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
SCN4B-202ENST00000415030 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
SCN4B-202ENST00000415030 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.05
SCN4B-202ENST00000415030 ROCK2O75116 1388 aaKnown RBP15.33■□□□□ 0.05
SCN4B-202ENST00000415030 NAIPQ13075 1403 aa15.33■□□□□ 0.04
SCN4B-202ENST00000415030 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
SCN4B-202ENST00000415030 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
SCN4B-202ENST00000415030 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
SCN4B-202ENST00000415030 TSPY4P0CV99 314 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms