RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 OSCARQ8IYS5 282 aa24.94■■□□□ 1.58
LINC00116-201ENST00000414416 CTTNBP2Q8WZ74 1663 aa24.92■■□□□ 1.58
LINC00116-201ENST00000414416 KIAA0586Q9BVV6 1533 aa24.9■■□□□ 1.58
LINC00116-201ENST00000414416 TNIKQ9UKE5 1360 aa24.87■■□□□ 1.57
LINC00116-201ENST00000414416 IQGAP2Q13576 1575 aa24.85■■□□□ 1.57
LINC00116-201ENST00000414416 CLASP1Q7Z460 1538 aa24.84■■□□□ 1.57
LINC00116-201ENST00000414416 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
LINC00116-201ENST00000414416 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
LINC00116-201ENST00000414416 UGGT2Q9NYU1 1516 aa24.72■■□□□ 1.55
LINC00116-201ENST00000414416 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
LINC00116-201ENST00000414416 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
LINC00116-201ENST00000414416 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
LINC00116-201ENST00000414416 CLIP1P30622 1438 aa24.66■■□□□ 1.54
LINC00116-201ENST00000414416 CARMIL2Q6F5E8 1435 aa24.63■■□□□ 1.53
LINC00116-201ENST00000414416 EFCAB5A4FU69 1503 aa24.63■■□□□ 1.53
LINC00116-201ENST00000414416 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
LINC00116-201ENST00000414416 SAMD9Q5K651 1589 aa24.62■■□□□ 1.53
LINC00116-201ENST00000414416 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
LINC00116-201ENST00000414416 KIAA0556O60303 1618 aa24.6■■□□□ 1.53
LINC00116-201ENST00000414416 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
LINC00116-201ENST00000414416 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.52
LINC00116-201ENST00000414416 FHOD3Q2V2M9 1422 aa24.53■■□□□ 1.52
LINC00116-201ENST00000414416 ARHGEF11O15085 1522 aa24.52■■□□□ 1.52
LINC00116-201ENST00000414416 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
LINC00116-201ENST00000414416 TTBK1Q5TCY1 1321 aaPredicted RBP24.47■■□□□ 1.51
LINC00116-201ENST00000414416 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.51
LINC00116-201ENST00000414416 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.51
LINC00116-201ENST00000414416 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.51
LINC00116-201ENST00000414416 PTPRGP23470 1445 aa24.44■■□□□ 1.5
LINC00116-201ENST00000414416 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
LINC00116-201ENST00000414416 FMN1Q68DA7 1419 aa24.41■■□□□ 1.5
LINC00116-201ENST00000414416 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
LINC00116-201ENST00000414416 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
LINC00116-201ENST00000414416 UACAQ9BZF9 1416 aa24.29■■□□□ 1.48
LINC00116-201ENST00000414416 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
LINC00116-201ENST00000414416 RAPGEF6Q8TEU7 1601 aa24.28■■□□□ 1.48
LINC00116-201ENST00000414416 ABCA8O94911 1581 aa24.28■■□□□ 1.48
LINC00116-201ENST00000414416 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
LINC00116-201ENST00000414416 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
LINC00116-201ENST00000414416 ATP1B4Q9UN42 357 aaPredicted RBP24.25■■□□□ 1.47
LINC00116-201ENST00000414416 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
LINC00116-201ENST00000414416 ABCC2Q92887 1545 aa24.23■■□□□ 1.47
LINC00116-201ENST00000414416 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
LINC00116-201ENST00000414416 UHRF1BP1LA0JNW5 1464 aa24.22■■□□□ 1.47
LINC00116-201ENST00000414416 NUP153P49790 1475 aaKnown RBP24.2■■□□□ 1.46
LINC00116-201ENST00000414416 ADCY10Q96PN6 1610 aa24.2■■□□□ 1.46
LINC00116-201ENST00000414416 ARID3CA6NKF2 412 aa24.15■■□□□ 1.46
LINC00116-201ENST00000414416 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
LINC00116-201ENST00000414416 CCDC18Q5T9S5 1454 aa24.12■■□□□ 1.45
LINC00116-201ENST00000414416 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
LINC00116-201ENST00000414416 KDM5BQ9UGL1 1544 aa24.11■■□□□ 1.45
LINC00116-201ENST00000414416 ATP10BO94823 1461 aa24.1■■□□□ 1.45
LINC00116-201ENST00000414416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.1■■□□□ 1.45
LINC00116-201ENST00000414416 APLP2Q06481 763 aa24.1■■□□□ 1.45
LINC00116-201ENST00000414416 HNRNPUL2Q1KMD3 747 aaKnown RBP24.1■■□□□ 1.45
LINC00116-201ENST00000414416 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
LINC00116-201ENST00000414416 NPM1P06748 294 aaKnown RBP eCLIP24.09■■□□□ 1.45
LINC00116-201ENST00000414416 ZCCHC11Q5TAX3 1644 aaKnown RBP24.07■■□□□ 1.44
LINC00116-201ENST00000414416 TIAM1Q13009 1591 aa24.04■■□□□ 1.44
LINC00116-201ENST00000414416 MAP3K1Q13233 1512 aa24.04■■□□□ 1.44
LINC00116-201ENST00000414416 CFAP43Q8NDM7 1665 aa24.03■■□□□ 1.44
LINC00116-201ENST00000414416 CDK11AQ9UQ88 783 aaPredicted RBP24.01■■□□□ 1.43
LINC00116-201ENST00000414416 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
LINC00116-201ENST00000414416 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
LINC00116-201ENST00000414416 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
LINC00116-201ENST00000414416 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
LINC00116-201ENST00000414416 MAGI3Q5TCQ9 1506 aa23.93■■□□□ 1.42
LINC00116-201ENST00000414416 LRRC9Q6ZRR7 1453 aa23.93■■□□□ 1.42
LINC00116-201ENST00000414416 MAPKBP1O60336 1514 aa23.93■■□□□ 1.42
LINC00116-201ENST00000414416 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
LINC00116-201ENST00000414416 WDR7Q9Y4E6 1490 aa23.91■■□□□ 1.42
LINC00116-201ENST00000414416 EHBP1L1Q8N3D4 1523 aa23.9■■□□□ 1.42
LINC00116-201ENST00000414416 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
LINC00116-201ENST00000414416 KCNH8Q96L42 1107 aa23.85■■□□□ 1.41
LINC00116-201ENST00000414416 KIF14Q15058 1648 aa23.82■■□□□ 1.4
LINC00116-201ENST00000414416 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
LINC00116-201ENST00000414416 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
LINC00116-201ENST00000414416 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
LINC00116-201ENST00000414416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
LINC00116-201ENST00000414416 DIP2BQ9P265 1576 aa23.73■■□□□ 1.39
LINC00116-201ENST00000414416 TTC37Q6PGP7 1564 aa23.71■■□□□ 1.39
LINC00116-201ENST00000414416 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
LINC00116-201ENST00000414416 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
LINC00116-201ENST00000414416 GLI2P10070 1586 aa23.7■■□□□ 1.38
LINC00116-201ENST00000414416 CCNB3Q8WWL7 1395 aa23.7■■□□□ 1.38
LINC00116-201ENST00000414416 PHLDB1Q86UU1 1377 aa23.67■■□□□ 1.38
LINC00116-201ENST00000414416 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.38
LINC00116-201ENST00000414416 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.38
LINC00116-201ENST00000414416 MYOM3Q5VTT5 1437 aa23.64■■□□□ 1.37
LINC00116-201ENST00000414416 CD109Q6YHK3 1445 aa23.64■■□□□ 1.37
LINC00116-201ENST00000414416 CDC42BPAQ5VT25 1732 aa23.63■■□□□ 1.37
LINC00116-201ENST00000414416 MYO5CQ9NQX4 1742 aa23.63■■□□□ 1.37
LINC00116-201ENST00000414416 MAP3K4Q9Y6R4 1608 aa23.62■■□□□ 1.37
LINC00116-201ENST00000414416 ITSN2Q9NZM3 1697 aa23.62■■□□□ 1.37
LINC00116-201ENST00000414416 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
LINC00116-201ENST00000414416 PLCH2O75038 1416 aa23.61■■□□□ 1.37
LINC00116-201ENST00000414416 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
LINC00116-201ENST00000414416 PREX2Q70Z35 1606 aa23.6■■□□□ 1.37
LINC00116-201ENST00000414416 CFDP1Q9UEE9 299 aaPredicted RBP23.59■■□□□ 1.37
LINC00116-201ENST00000414416 CDC42BPBQ9Y5S2 1711 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms