RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CUL7Q14999 1698 aa28.83■■■□□ 2.21
SCAMP4-204ENST00000414057 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
SCAMP4-204ENST00000414057 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
SCAMP4-204ENST00000414057 KIAA0586Q9BVV6 1533 aa28.74■■■□□ 2.19
SCAMP4-204ENST00000414057 NPM1P06748 294 aaKnown RBP eCLIP28.58■■■□□ 2.17
SCAMP4-204ENST00000414057 CARMIL2Q6F5E8 1435 aa28.51■■■□□ 2.15
SCAMP4-204ENST00000414057 RAPGEF2Q9Y4G8 1499 aa28.51■■■□□ 2.15
SCAMP4-204ENST00000414057 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
SCAMP4-204ENST00000414057 PTPRGP23470 1445 aa28.45■■■□□ 2.14
SCAMP4-204ENST00000414057 TNIKQ9UKE5 1360 aa28.42■■■□□ 2.14
SCAMP4-204ENST00000414057 ADCY10Q96PN6 1610 aa28.38■■■□□ 2.13
SCAMP4-204ENST00000414057 MAPKBP1O60336 1514 aa28.37■■■□□ 2.13
SCAMP4-204ENST00000414057 TTBK1Q5TCY1 1321 aaPredicted RBP28.36■■■□□ 2.13
SCAMP4-204ENST00000414057 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
SCAMP4-204ENST00000414057 ABCC10Q5T3U5 1492 aa28.33■■■□□ 2.13
SCAMP4-204ENST00000414057 UGGT2Q9NYU1 1516 aa28.31■■■□□ 2.12
SCAMP4-204ENST00000414057 DISP1Q96F81 1524 aa28.29■■■□□ 2.12
SCAMP4-204ENST00000414057 KIF13AQ9H1H9 1805 aa28.27■■■□□ 2.12
SCAMP4-204ENST00000414057 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
SCAMP4-204ENST00000414057 ABCC2Q92887 1545 aa28.24■■■□□ 2.11
SCAMP4-204ENST00000414057 UACAQ9BZF9 1416 aa28.23■■■□□ 2.11
SCAMP4-204ENST00000414057 UHRF1BP1LA0JNW5 1464 aa28.22■■■□□ 2.11
SCAMP4-204ENST00000414057 DIP2BQ9P265 1576 aa28.21■■■□□ 2.11
SCAMP4-204ENST00000414057 KIAA0556O60303 1618 aa28.19■■■□□ 2.1
SCAMP4-204ENST00000414057 GOLGA3Q08378 1498 aa28.17■■■□□ 2.1
SCAMP4-204ENST00000414057 CTTNBP2Q8WZ74 1663 aa28.17■■■□□ 2.1
SCAMP4-204ENST00000414057 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
SCAMP4-204ENST00000414057 CSRNP3Q8WYN3 585 aa28.16■■■□□ 2.1
SCAMP4-204ENST00000414057 PLB1Q6P1J6 1458 aa28.13■■■□□ 2.09
SCAMP4-204ENST00000414057 EEA1Q15075 1411 aa28.11■■■□□ 2.09
SCAMP4-204ENST00000414057 ASXL2Q76L83 1435 aa28.11■■■□□ 2.09
SCAMP4-204ENST00000414057 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
SCAMP4-204ENST00000414057 KDM5BQ9UGL1 1544 aa28.08■■■□□ 2.09
SCAMP4-204ENST00000414057 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
SCAMP4-204ENST00000414057 GLI2P10070 1586 aa27.99■■■□□ 2.07
SCAMP4-204ENST00000414057 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
SCAMP4-204ENST00000414057 TSPOAP1O95153 1857 aa27.93■■■□□ 2.06
SCAMP4-204ENST00000414057 KDM6BO15054 1643 aa27.93■■■□□ 2.06
SCAMP4-204ENST00000414057 EPRSP07814 1512 aaKnown RBP27.93■■■□□ 2.06
SCAMP4-204ENST00000414057 ABCA8O94911 1581 aa27.91■■■□□ 2.06
SCAMP4-204ENST00000414057 WDR7Q9Y4E6 1490 aa27.89■■■□□ 2.05
SCAMP4-204ENST00000414057 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
SCAMP4-204ENST00000414057 TEX14Q8IWB6 1497 aa27.82■■■□□ 2.04
SCAMP4-204ENST00000414057 SAMD9Q5K651 1589 aa27.81■■■□□ 2.04
SCAMP4-204ENST00000414057 MAP3K4Q9Y6R4 1608 aa27.8■■■□□ 2.04
SCAMP4-204ENST00000414057 PPRC1Q5VV67 1664 aaKnown RBP27.77■■■□□ 2.04
SCAMP4-204ENST00000414057 KCNH8Q96L42 1107 aa27.76■■■□□ 2.04
SCAMP4-204ENST00000414057 KIF21BO75037 1637 aa27.76■■■□□ 2.03
SCAMP4-204ENST00000414057 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
SCAMP4-204ENST00000414057 CD109Q6YHK3 1445 aa27.71■■■□□ 2.03
SCAMP4-204ENST00000414057 ATP10BO94823 1461 aa27.71■■■□□ 2.03
SCAMP4-204ENST00000414057 ARID3CA6NKF2 412 aa27.7■■■□□ 2.02
SCAMP4-204ENST00000414057 MAGI3Q5TCQ9 1506 aa27.67■■■□□ 2.02
SCAMP4-204ENST00000414057 RAPGEF6Q8TEU7 1601 aa27.66■■■□□ 2.02
SCAMP4-204ENST00000414057 CFAP43Q8NDM7 1665 aa27.66■■■□□ 2.02
SCAMP4-204ENST00000414057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
SCAMP4-204ENST00000414057 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
SCAMP4-204ENST00000414057 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
SCAMP4-204ENST00000414057 EFCAB5A4FU69 1503 aa27.65■■■□□ 2.02
SCAMP4-204ENST00000414057 FHOD3Q2V2M9 1422 aa27.65■■■□□ 2.02
SCAMP4-204ENST00000414057 COL17A1Q9UMD9 1497 aaPredicted RBP27.62■■■□□ 2.01
SCAMP4-204ENST00000414057 NUP153P49790 1475 aaKnown RBP27.57■■■□□ 2
SCAMP4-204ENST00000414057 EHMT2Q96KQ7 1210 aa27.55■■■□□ 2
SCAMP4-204ENST00000414057 KDM4FA0A1W2PPD8 638 aa27.54■■■□□ 2
SCAMP4-204ENST00000414057 PLEKHD1A6NEE1 506 aa27.52■■■□□ 2
SCAMP4-204ENST00000414057 PHLDB1Q86UU1 1377 aa27.5■■□□□ 1.99
SCAMP4-204ENST00000414057 ABCA9Q8IUA7 1624 aa27.49■■□□□ 1.99
SCAMP4-204ENST00000414057 FMN1Q68DA7 1419 aa27.45■■□□□ 1.98
SCAMP4-204ENST00000414057 ARAP3Q8WWN8 1544 aa27.44■■□□□ 1.98
SCAMP4-204ENST00000414057 NEO1Q92859 1461 aa27.4■■□□□ 1.98
SCAMP4-204ENST00000414057 ARHGAP35Q9NRY4 1499 aa27.39■■□□□ 1.98
SCAMP4-204ENST00000414057 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
SCAMP4-204ENST00000414057 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
SCAMP4-204ENST00000414057 CDK11AQ9UQ88 783 aaPredicted RBP27.34■■□□□ 1.97
SCAMP4-204ENST00000414057 HECW1Q76N89 1606 aa27.31■■□□□ 1.96
SCAMP4-204ENST00000414057 CDK13Q14004 1512 aaKnown RBP27.29■■□□□ 1.96
SCAMP4-204ENST00000414057 RAPGEF3O95398 923 aa27.27■■□□□ 1.96
SCAMP4-204ENST00000414057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.27■■□□□ 1.966e-6■■■■■ 38.2
SCAMP4-204ENST00000414057 FANCAO15360 1455 aa27.24■■□□□ 1.95
SCAMP4-204ENST00000414057 AKNAQ7Z591 1439 aa27.22■■□□□ 1.95
SCAMP4-204ENST00000414057 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
SCAMP4-204ENST00000414057 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
SCAMP4-204ENST00000414057 TTC37Q6PGP7 1564 aa27.19■■□□□ 1.94
SCAMP4-204ENST00000414057 PLCH2O75038 1416 aa27.17■■□□□ 1.94
SCAMP4-204ENST00000414057 CLIP1P30622 1438 aa27.16■■□□□ 1.94
SCAMP4-204ENST00000414057 TROQ12816 1431 aaPredicted RBP27.14■■□□□ 1.94
SCAMP4-204ENST00000414057 CASKIN1Q8WXD9 1431 aa27.13■■□□□ 1.93
SCAMP4-204ENST00000414057 EFCAB2Q5VUJ9 269 aa27.12■■□□□ 1.93
SCAMP4-204ENST00000414057 FRMPD1Q5SYB0 1578 aa27.12■■□□□ 1.93
SCAMP4-204ENST00000414057 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
SCAMP4-204ENST00000414057 KIF14Q15058 1648 aa27.1■■□□□ 1.93
SCAMP4-204ENST00000414057 ARID4BQ4LE39 1312 aaPredicted RBP27.07■■□□□ 1.92
SCAMP4-204ENST00000414057 SCAPERQ9BY12 1400 aa27.05■■□□□ 1.92
SCAMP4-204ENST00000414057 RICTORQ6R327 1708 aa27.05■■□□□ 1.92
SCAMP4-204ENST00000414057 PCF11O94913 1555 aaKnown RBP27.04■■□□□ 1.92
SCAMP4-204ENST00000414057 MAGI2Q86UL8 1455 aa27.03■■□□□ 1.92
SCAMP4-204ENST00000414057 FYCO1Q9BQS8 1478 aa27.03■■□□□ 1.92
SCAMP4-204ENST00000414057 MYO5CQ9NQX4 1742 aa27.03■■□□□ 1.92
SCAMP4-204ENST00000414057 ZMYM4Q5VZL5 1548 aa27.02■■□□□ 1.92
SCAMP4-204ENST00000414057 ARHGEF40Q8TER5 1519 aa27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 897.3 ms