RNA–Protein interactions for RNA: ENST00000413963.2

AP001888.1-201, humanhuman

BASIC

Gene AP001888.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001888.1-201ENST00000413963 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
AP001888.1-201ENST00000413963 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
AP001888.1-201ENST00000413963 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
AP001888.1-201ENST00000413963 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
AP001888.1-201ENST00000413963 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
AP001888.1-201ENST00000413963 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
AP001888.1-201ENST00000413963 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
AP001888.1-201ENST00000413963 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
AP001888.1-201ENST00000413963 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
AP001888.1-201ENST00000413963 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
AP001888.1-201ENST00000413963 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
AP001888.1-201ENST00000413963 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
AP001888.1-201ENST00000413963 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
AP001888.1-201ENST00000413963 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
AP001888.1-201ENST00000413963 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
AP001888.1-201ENST00000413963 DISP1Q96F81 1524 aa17.22■□□□□ 0.35
AP001888.1-201ENST00000413963 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
AP001888.1-201ENST00000413963 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
AP001888.1-201ENST00000413963 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
AP001888.1-201ENST00000413963 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
AP001888.1-201ENST00000413963 SAMD9Q5K651 1589 aa17.21■□□□□ 0.35
AP001888.1-201ENST00000413963 RANGAP1P46060 587 aaPredicted RBP17.21■□□□□ 0.35
AP001888.1-201ENST00000413963 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
AP001888.1-201ENST00000413963 CLIP1P30622 1438 aa17.16■□□□□ 0.34
AP001888.1-201ENST00000413963 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
AP001888.1-201ENST00000413963 PTPRGP23470 1445 aa17.14■□□□□ 0.33
AP001888.1-201ENST00000413963 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
AP001888.1-201ENST00000413963 ARHGAP35Q9NRY4 1499 aa17.13■□□□□ 0.33
AP001888.1-201ENST00000413963 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
AP001888.1-201ENST00000413963 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
AP001888.1-201ENST00000413963 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
AP001888.1-201ENST00000413963 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
AP001888.1-201ENST00000413963 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
AP001888.1-201ENST00000413963 UACAQ9BZF9 1416 aa17.04■□□□□ 0.32
AP001888.1-201ENST00000413963 UHRF1BP1LA0JNW5 1464 aa17.01■□□□□ 0.31
AP001888.1-201ENST00000413963 ABCA8O94911 1581 aa17.01■□□□□ 0.31
AP001888.1-201ENST00000413963 ABCC2Q92887 1545 aa17■□□□□ 0.31
AP001888.1-201ENST00000413963 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
AP001888.1-201ENST00000413963 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
AP001888.1-201ENST00000413963 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
AP001888.1-201ENST00000413963 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.31
AP001888.1-201ENST00000413963 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
AP001888.1-201ENST00000413963 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
AP001888.1-201ENST00000413963 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
AP001888.1-201ENST00000413963 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
AP001888.1-201ENST00000413963 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
AP001888.1-201ENST00000413963 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
AP001888.1-201ENST00000413963 PCF11O94913 1555 aaKnown RBP16.91■□□□□ 0.3
AP001888.1-201ENST00000413963 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
AP001888.1-201ENST00000413963 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
AP001888.1-201ENST00000413963 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
AP001888.1-201ENST00000413963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
AP001888.1-201ENST00000413963 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
AP001888.1-201ENST00000413963 ATP10BO94823 1461 aa16.86■□□□□ 0.29
AP001888.1-201ENST00000413963 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
AP001888.1-201ENST00000413963 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
AP001888.1-201ENST00000413963 MAPKBP1O60336 1514 aa16.84■□□□□ 0.29
AP001888.1-201ENST00000413963 ARID3CA6NKF2 412 aa16.83■□□□□ 0.28
AP001888.1-201ENST00000413963 APLP2Q06481 763 aa16.83■□□□□ 0.28
AP001888.1-201ENST00000413963 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
AP001888.1-201ENST00000413963 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
AP001888.1-201ENST00000413963 PLEKHD1A6NEE1 506 aa16.8■□□□□ 0.28
AP001888.1-201ENST00000413963 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
AP001888.1-201ENST00000413963 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
AP001888.1-201ENST00000413963 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
AP001888.1-201ENST00000413963 CFAP43Q8NDM7 1665 aa16.76■□□□□ 0.27
AP001888.1-201ENST00000413963 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
AP001888.1-201ENST00000413963 MTUS2Q5JR59 1369 aa16.73■□□□□ 0.27
AP001888.1-201ENST00000413963 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
AP001888.1-201ENST00000413963 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
AP001888.1-201ENST00000413963 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
AP001888.1-201ENST00000413963 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
AP001888.1-201ENST00000413963 KIF14Q15058 1648 aa16.69■□□□□ 0.26
AP001888.1-201ENST00000413963 GLI2P10070 1586 aa16.68■□□□□ 0.26
AP001888.1-201ENST00000413963 DIP2BQ9P265 1576 aa16.68■□□□□ 0.26
AP001888.1-201ENST00000413963 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
AP001888.1-201ENST00000413963 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
AP001888.1-201ENST00000413963 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
AP001888.1-201ENST00000413963 MAGI3Q5TCQ9 1506 aa16.66■□□□□ 0.26
AP001888.1-201ENST00000413963 SUPT6HQ7KZ85 1726 aaKnown RBP16.64■□□□□ 0.25
AP001888.1-201ENST00000413963 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
AP001888.1-201ENST00000413963 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
AP001888.1-201ENST00000413963 KANK4Q5T7N3 995 aaPredicted RBP16.62■□□□□ 0.25
AP001888.1-201ENST00000413963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.61■□□□□ 0.25
AP001888.1-201ENST00000413963 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
AP001888.1-201ENST00000413963 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
AP001888.1-201ENST00000413963 MYO5CQ9NQX4 1742 aa16.57■□□□□ 0.24
AP001888.1-201ENST00000413963 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
AP001888.1-201ENST00000413963 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
AP001888.1-201ENST00000413963 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
AP001888.1-201ENST00000413963 TEX14Q8IWB6 1497 aa16.55■□□□□ 0.24
AP001888.1-201ENST00000413963 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
AP001888.1-201ENST00000413963 PLCH2O75038 1416 aa16.54■□□□□ 0.24
AP001888.1-201ENST00000413963 ITSN2Q9NZM3 1697 aa16.54■□□□□ 0.24
AP001888.1-201ENST00000413963 TSPOAP1O95153 1857 aa16.53■□□□□ 0.24
AP001888.1-201ENST00000413963 PREX2Q70Z35 1606 aa16.52■□□□□ 0.24
AP001888.1-201ENST00000413963 CFAP74Q9C0B2 1584 aa16.52■□□□□ 0.24
AP001888.1-201ENST00000413963 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
AP001888.1-201ENST00000413963 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
AP001888.1-201ENST00000413963 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms