RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 CUL7Q14999 1698 aa28.93■■■□□ 2.22
COL6A2-205ENST00000413758 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.22
COL6A2-205ENST00000413758 CARMIL1Q5VZK9 1371 aa28.84■■■□□ 2.21
COL6A2-205ENST00000413758 KIAA0586Q9BVV6 1533 aa28.8■■■□□ 2.2
COL6A2-205ENST00000413758 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
COL6A2-205ENST00000413758 TTBK1Q5TCY1 1321 aaPredicted RBP28.63■■■□□ 2.17
COL6A2-205ENST00000413758 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
COL6A2-205ENST00000413758 CARMIL2Q6F5E8 1435 aa28.58■■■□□ 2.17
COL6A2-205ENST00000413758 IQGAP2Q13576 1575 aa28.58■■■□□ 2.17
COL6A2-205ENST00000413758 PTPRGP23470 1445 aa28.54■■■□□ 2.16
COL6A2-205ENST00000413758 ADCY10Q96PN6 1610 aa28.52■■■□□ 2.16
COL6A2-205ENST00000413758 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
COL6A2-205ENST00000413758 KIF13AQ9H1H9 1805 aa28.44■■■□□ 2.14
COL6A2-205ENST00000413758 FAM69CQ0P6D2 419 aa28.44■■■□□ 2.14
COL6A2-205ENST00000413758 MAPKBP1O60336 1514 aa28.42■■■□□ 2.14
COL6A2-205ENST00000413758 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.13
COL6A2-205ENST00000413758 DISP1Q96F81 1524 aa28.38■■■□□ 2.13
COL6A2-205ENST00000413758 UGGT2Q9NYU1 1516 aa28.37■■■□□ 2.13
COL6A2-205ENST00000413758 CTTNBP2Q8WZ74 1663 aa28.34■■■□□ 2.13
COL6A2-205ENST00000413758 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
COL6A2-205ENST00000413758 DIP2BQ9P265 1576 aa28.31■■■□□ 2.12
COL6A2-205ENST00000413758 KIAA0556O60303 1618 aa28.3■■■□□ 2.12
COL6A2-205ENST00000413758 ABCC2Q92887 1545 aa28.3■■■□□ 2.12
COL6A2-205ENST00000413758 UACAQ9BZF9 1416 aa28.3■■■□□ 2.12
COL6A2-205ENST00000413758 UHRF1BP1LA0JNW5 1464 aa28.26■■■□□ 2.11
COL6A2-205ENST00000413758 CSRNP3Q8WYN3 585 aa28.25■■■□□ 2.11
COL6A2-205ENST00000413758 GOLGA3Q08378 1498 aa28.23■■■□□ 2.11
COL6A2-205ENST00000413758 ASXL2Q76L83 1435 aa28.2■■■□□ 2.11
COL6A2-205ENST00000413758 PLB1Q6P1J6 1458 aa28.19■■■□□ 2.1
COL6A2-205ENST00000413758 TSPOAP1O95153 1857 aa28.19■■■□□ 2.1
COL6A2-205ENST00000413758 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
COL6A2-205ENST00000413758 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
COL6A2-205ENST00000413758 EEA1Q15075 1411 aa28.14■■■□□ 2.1
COL6A2-205ENST00000413758 KDM5BQ9UGL1 1544 aa28.13■■■□□ 2.09
COL6A2-205ENST00000413758 ZCCHC11Q5TAX3 1644 aaKnown RBP28.1■■■□□ 2.09
COL6A2-205ENST00000413758 P3H3Q8IVL6 736 aa28.1■■■□□ 2.09
COL6A2-205ENST00000413758 KDM6BO15054 1643 aa28.05■■■□□ 2.08
COL6A2-205ENST00000413758 GLI2P10070 1586 aa28.03■■■□□ 2.08
COL6A2-205ENST00000413758 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
COL6A2-205ENST00000413758 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
COL6A2-205ENST00000413758 ABCA8O94911 1581 aa28■■■□□ 2.07
COL6A2-205ENST00000413758 WDR7Q9Y4E6 1490 aa27.96■■■□□ 2.07
COL6A2-205ENST00000413758 ARID3CA6NKF2 412 aa27.96■■■□□ 2.07
COL6A2-205ENST00000413758 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.06
COL6A2-205ENST00000413758 KCNH8Q96L42 1107 aa27.94■■■□□ 2.06
COL6A2-205ENST00000413758 PPRC1Q5VV67 1664 aaKnown RBP27.92■■■□□ 2.06
COL6A2-205ENST00000413758 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
COL6A2-205ENST00000413758 SAMD9Q5K651 1589 aa27.9■■■□□ 2.06
COL6A2-205ENST00000413758 MAP3K4Q9Y6R4 1608 aa27.9■■■□□ 2.06
COL6A2-205ENST00000413758 KIF21BO75037 1637 aa27.87■■■□□ 2.05
COL6A2-205ENST00000413758 TEX14Q8IWB6 1497 aa27.87■■■□□ 2.05
COL6A2-205ENST00000413758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.83■■■□□ 2.05
COL6A2-205ENST00000413758 HNRNPUL2Q1KMD3 747 aaKnown RBP27.83■■■□□ 2.05
COL6A2-205ENST00000413758 UBTFP17480 764 aaKnown RBP27.81■■■□□ 2.04
COL6A2-205ENST00000413758 FHOD3Q2V2M9 1422 aa27.81■■■□□ 2.04
COL6A2-205ENST00000413758 CD109Q6YHK3 1445 aa27.8■■■□□ 2.04
COL6A2-205ENST00000413758 ATP10BO94823 1461 aa27.8■■■□□ 2.04
COL6A2-205ENST00000413758 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
COL6A2-205ENST00000413758 CFAP43Q8NDM7 1665 aa27.76■■■□□ 2.03
COL6A2-205ENST00000413758 COL17A1Q9UMD9 1497 aaPredicted RBP27.72■■■□□ 2.03
COL6A2-205ENST00000413758 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
COL6A2-205ENST00000413758 MAGI3Q5TCQ9 1506 aa27.7■■■□□ 2.02
COL6A2-205ENST00000413758 NUP153P49790 1475 aaKnown RBP27.67■■■□□ 2.02
COL6A2-205ENST00000413758 KDM4FA0A1W2PPD8 638 aa27.64■■■□□ 2.02
COL6A2-205ENST00000413758 PLEKHD1A6NEE1 506 aa27.6■■■□□ 2.01
COL6A2-205ENST00000413758 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
COL6A2-205ENST00000413758 ABCA9Q8IUA7 1624 aa27.58■■■□□ 2.01
COL6A2-205ENST00000413758 ADGRL1O94910 1474 aa27.51■■□□□ 1.99
COL6A2-205ENST00000413758 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
COL6A2-205ENST00000413758 ARHGAP35Q9NRY4 1499 aa27.5■■□□□ 1.99
COL6A2-205ENST00000413758 PHLDB1Q86UU1 1377 aa27.48■■□□□ 1.99
COL6A2-205ENST00000413758 CDK13Q14004 1512 aaKnown RBP27.47■■□□□ 1.99
COL6A2-205ENST00000413758 ARAP3Q8WWN8 1544 aa27.47■■□□□ 1.99
COL6A2-205ENST00000413758 NEO1Q92859 1461 aa27.44■■□□□ 1.98
COL6A2-205ENST00000413758 HECW1Q76N89 1606 aa27.43■■□□□ 1.98
COL6A2-205ENST00000413758 RAPGEF3O95398 923 aa27.4■■□□□ 1.98
COL6A2-205ENST00000413758 CDK11AQ9UQ88 783 aaPredicted RBP27.38■■□□□ 1.97
COL6A2-205ENST00000413758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.37■■□□□ 1.97
COL6A2-205ENST00000413758 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
COL6A2-205ENST00000413758 FANCAO15360 1455 aa27.32■■□□□ 1.96
COL6A2-205ENST00000413758 AKNAQ7Z591 1439 aa27.31■■□□□ 1.96
COL6A2-205ENST00000413758 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
COL6A2-205ENST00000413758 DENND4BO75064 1496 aaPredicted RBP27.28■■□□□ 1.96
COL6A2-205ENST00000413758 FRMPD1Q5SYB0 1578 aa27.25■■□□□ 1.95
COL6A2-205ENST00000413758 CLIP1P30622 1438 aa27.24■■□□□ 1.95
COL6A2-205ENST00000413758 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
COL6A2-205ENST00000413758 PLCH2O75038 1416 aa27.22■■□□□ 1.95
COL6A2-205ENST00000413758 TROQ12816 1431 aaPredicted RBP27.22■■□□□ 1.95
COL6A2-205ENST00000413758 KIF14Q15058 1648 aa27.21■■□□□ 1.95
COL6A2-205ENST00000413758 CASKIN1Q8WXD9 1431 aa27.21■■□□□ 1.95
COL6A2-205ENST00000413758 PCF11O94913 1555 aaKnown RBP27.21■■□□□ 1.95
COL6A2-205ENST00000413758 LRRIQ1Q96JM4 1722 aa27.19■■□□□ 1.94
COL6A2-205ENST00000413758 MYO5CQ9NQX4 1742 aa27.19■■□□□ 1.94
COL6A2-205ENST00000413758 EFCAB2Q5VUJ9 269 aa27.18■■□□□ 1.94
COL6A2-205ENST00000413758 RICTORQ6R327 1708 aa27.18■■□□□ 1.94
COL6A2-205ENST00000413758 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
COL6A2-205ENST00000413758 SCAPERQ9BY12 1400 aa27.16■■□□□ 1.94
COL6A2-205ENST00000413758 ARHGEF40Q8TER5 1519 aa27.12■■□□□ 1.93
COL6A2-205ENST00000413758 FYCO1Q9BQS8 1478 aa27.12■■□□□ 1.93
COL6A2-205ENST00000413758 ARHGAP5Q13017 1502 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms