RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 LOC105371045A0A1W2PR82 267 aa30.13■■■□□ 2.41
CIRBP-202ENST00000413636 CTTNBP2Q8WZ74 1663 aa30.13■■■□□ 2.41
CIRBP-202ENST00000413636 KIAA0586Q9BVV6 1533 aa30.08■■■□□ 2.41
CIRBP-202ENST00000413636 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
CIRBP-202ENST00000413636 IQGAP2Q13576 1575 aa30.02■■■□□ 2.4
CIRBP-202ENST00000413636 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
CIRBP-202ENST00000413636 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
CIRBP-202ENST00000413636 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
CIRBP-202ENST00000413636 RANGAP1P46060 587 aaPredicted RBP29.89■■■□□ 2.38
CIRBP-202ENST00000413636 UGGT2Q9NYU1 1516 aa29.87■■■□□ 2.37
CIRBP-202ENST00000413636 PRG4Q92954 1404 aaPredicted RBP29.82■■■□□ 2.36
CIRBP-202ENST00000413636 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
CIRBP-202ENST00000413636 DISP1Q96F81 1524 aa29.76■■■□□ 2.35
CIRBP-202ENST00000413636 CEP162Q5TB80 1403 aa29.75■■■□□ 2.35
CIRBP-202ENST00000413636 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
CIRBP-202ENST00000413636 CARMIL2Q6F5E8 1435 aa29.74■■■□□ 2.35
CIRBP-202ENST00000413636 KIAA0556O60303 1618 aa29.73■■■□□ 2.35
CIRBP-202ENST00000413636 CLIP1P30622 1438 aa29.72■■■□□ 2.35
CIRBP-202ENST00000413636 EFCAB5A4FU69 1503 aa29.72■■■□□ 2.35
CIRBP-202ENST00000413636 ARHGAP35Q9NRY4 1499 aa29.7■■■□□ 2.34
CIRBP-202ENST00000413636 P3H3Q8IVL6 736 aa29.7■■■□□ 2.34
CIRBP-202ENST00000413636 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
CIRBP-202ENST00000413636 RIMBP3CA6NJZ7 1639 aa29.65■■■□□ 2.34
CIRBP-202ENST00000413636 RIMBP3BA6NNM3 1639 aa29.65■■■□□ 2.34
CIRBP-202ENST00000413636 RIMBP3Q9UFD9 1639 aa29.65■■■□□ 2.34
CIRBP-202ENST00000413636 FHOD3Q2V2M9 1422 aa29.63■■■□□ 2.33
CIRBP-202ENST00000413636 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
CIRBP-202ENST00000413636 TTBK1Q5TCY1 1321 aaPredicted RBP29.59■■■□□ 2.33
CIRBP-202ENST00000413636 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
CIRBP-202ENST00000413636 PTPRGP23470 1445 aa29.53■■■□□ 2.32
CIRBP-202ENST00000413636 FMN1Q68DA7 1419 aa29.44■■■□□ 2.3
CIRBP-202ENST00000413636 CYB5RLQ6IPT4 315 aa29.41■■■□□ 2.3
CIRBP-202ENST00000413636 PLB1Q6P1J6 1458 aa29.39■■■□□ 2.3
CIRBP-202ENST00000413636 ABCA8O94911 1581 aa29.36■■■□□ 2.29
CIRBP-202ENST00000413636 RAPGEF6Q8TEU7 1601 aa29.35■■■□□ 2.29
CIRBP-202ENST00000413636 UACAQ9BZF9 1416 aa29.35■■■□□ 2.29
CIRBP-202ENST00000413636 VPS8Q8N3P4 1428 aa29.34■■■□□ 2.29
CIRBP-202ENST00000413636 PCF11O94913 1555 aaKnown RBP29.33■■■□□ 2.29
CIRBP-202ENST00000413636 ADCY10Q96PN6 1610 aa29.29■■■□□ 2.28
CIRBP-202ENST00000413636 ABCC2Q92887 1545 aa29.29■■■□□ 2.28
CIRBP-202ENST00000413636 CASKIN1Q8WXD9 1431 aa29.28■■■□□ 2.28
CIRBP-202ENST00000413636 ATP1B4Q9UN42 357 aaPredicted RBP29.27■■■□□ 2.28
CIRBP-202ENST00000413636 UHRF1BP1LA0JNW5 1464 aa29.27■■■□□ 2.28
CIRBP-202ENST00000413636 HECW1Q76N89 1606 aa29.25■■■□□ 2.27
CIRBP-202ENST00000413636 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
CIRBP-202ENST00000413636 NUP153P49790 1475 aaKnown RBP29.23■■■□□ 2.27
CIRBP-202ENST00000413636 ARID3CA6NKF2 412 aa29.2■■■□□ 2.27
CIRBP-202ENST00000413636 LRRIQ1Q96JM4 1722 aa29.18■■■□□ 2.26
CIRBP-202ENST00000413636 EPRSP07814 1512 aaKnown RBP29.14■■■□□ 2.26
CIRBP-202ENST00000413636 KDM5BQ9UGL1 1544 aa29.14■■■□□ 2.26
CIRBP-202ENST00000413636 ATP10BO94823 1461 aa29.13■■■□□ 2.25
CIRBP-202ENST00000413636 CDK13Q14004 1512 aaKnown RBP29.13■■■□□ 2.25
CIRBP-202ENST00000413636 ZCCHC11Q5TAX3 1644 aaKnown RBP29.13■■■□□ 2.25
CIRBP-202ENST00000413636 NPM1P06748 294 aaKnown RBP eCLIP29.1■■■□□ 2.25
CIRBP-202ENST00000413636 CCDC18Q5T9S5 1454 aa29.1■■■□□ 2.25
CIRBP-202ENST00000413636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
CIRBP-202ENST00000413636 HNRNPUL2Q1KMD3 747 aaKnown RBP29.09■■■□□ 2.25
CIRBP-202ENST00000413636 CFAP43Q8NDM7 1665 aa29.02■■■□□ 2.24
CIRBP-202ENST00000413636 TIAM1Q13009 1591 aa29.01■■■□□ 2.23
CIRBP-202ENST00000413636 APLP2Q06481 763 aa29.01■■■□□ 2.23
CIRBP-202ENST00000413636 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
CIRBP-202ENST00000413636 ASXL2Q76L83 1435 aa28.95■■■□□ 2.23
CIRBP-202ENST00000413636 MAPKBP1O60336 1514 aa28.94■■■□□ 2.22
CIRBP-202ENST00000413636 CDK11AQ9UQ88 783 aaPredicted RBP28.94■■■□□ 2.22
CIRBP-202ENST00000413636 PLEKHD1A6NEE1 506 aa28.93■■■□□ 2.22
CIRBP-202ENST00000413636 MAGI3Q5TCQ9 1506 aa28.92■■■□□ 2.22
CIRBP-202ENST00000413636 WDR7Q9Y4E6 1490 aa28.89■■■□□ 2.22
CIRBP-202ENST00000413636 MTUS2Q5JR59 1369 aa28.88■■■□□ 2.21
CIRBP-202ENST00000413636 KANK4Q5T7N3 995 aaPredicted RBP28.87■■■□□ 2.21
CIRBP-202ENST00000413636 TROQ12816 1431 aaPredicted RBP28.87■■■□□ 2.21
CIRBP-202ENST00000413636 LRRC9Q6ZRR7 1453 aa28.87■■■□□ 2.21
CIRBP-202ENST00000413636 EHBP1L1Q8N3D4 1523 aa28.84■■■□□ 2.21
CIRBP-202ENST00000413636 KCNH8Q96L42 1107 aa28.83■■■□□ 2.21
CIRBP-202ENST00000413636 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
CIRBP-202ENST00000413636 KIF14Q15058 1648 aa28.78■■■□□ 2.2
CIRBP-202ENST00000413636 TRIM26Q12899 539 aaPredicted RBP28.75■■■□□ 2.19
CIRBP-202ENST00000413636 ABCC10Q5T3U5 1492 aa28.74■■■□□ 2.19
CIRBP-202ENST00000413636 SUPT6HQ7KZ85 1726 aaKnown RBP28.74■■■□□ 2.19
CIRBP-202ENST00000413636 DIP2BQ9P265 1576 aa28.73■■■□□ 2.19
CIRBP-202ENST00000413636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.7■■■□□ 2.18
CIRBP-202ENST00000413636 NCOA2Q15596 1464 aa28.68■■■□□ 2.18
CIRBP-202ENST00000413636 KIF13AQ9H1H9 1805 aa28.68■■■□□ 2.18
CIRBP-202ENST00000413636 FAM69CQ0P6D2 419 aa28.68■■■□□ 2.18
CIRBP-202ENST00000413636 TTC37Q6PGP7 1564 aa28.68■■■□□ 2.18
CIRBP-202ENST00000413636 GLI2P10070 1586 aa28.67■■■□□ 2.18
CIRBP-202ENST00000413636 ABCA9Q8IUA7 1624 aa28.67■■■□□ 2.18
CIRBP-202ENST00000413636 PCGF6Q9BYE7 350 aa28.66■■■□□ 2.18
CIRBP-202ENST00000413636 TRHP20396 242 aaPredicted RBP28.6■■■□□ 2.17
CIRBP-202ENST00000413636 MAP3K4Q9Y6R4 1608 aa28.6■■■□□ 2.17
CIRBP-202ENST00000413636 CCNB3Q8WWL7 1395 aa28.59■■■□□ 2.17
CIRBP-202ENST00000413636 MYO5CQ9NQX4 1742 aa28.58■■■□□ 2.17
CIRBP-202ENST00000413636 CDC42BPAQ5VT25 1732 aa28.57■■■□□ 2.16
CIRBP-202ENST00000413636 CD109Q6YHK3 1445 aa28.57■■■□□ 2.16
CIRBP-202ENST00000413636 PHLDB1Q86UU1 1377 aa28.56■■■□□ 2.16
CIRBP-202ENST00000413636 GPATCH8Q9UKJ3 1502 aaKnown RBP28.55■■■□□ 2.16
CIRBP-202ENST00000413636 ITSN2Q9NZM3 1697 aa28.53■■■□□ 2.16
CIRBP-202ENST00000413636 TSPOAP1O95153 1857 aa28.53■■■□□ 2.16
CIRBP-202ENST00000413636 PREX2Q70Z35 1606 aa28.53■■■□□ 2.16
CIRBP-202ENST00000413636 PLCH2O75038 1416 aa28.52■■■□□ 2.16
CIRBP-202ENST00000413636 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms