RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
CPSF7-204ENST00000413232 CUL7Q14999 1698 aa33.55■■■□□ 2.96
CPSF7-204ENST00000413232 KIAA0586Q9BVV6 1533 aa33.48■■■□□ 2.95
CPSF7-204ENST00000413232 KIF13AQ9H1H9 1805 aa33.43■■■□□ 2.94
CPSF7-204ENST00000413232 CARMIL1Q5VZK9 1371 aa33.43■■■□□ 2.94
CPSF7-204ENST00000413232 ADCY10Q96PN6 1610 aa33.35■■■□□ 2.93
CPSF7-204ENST00000413232 NPM1P06748 294 aaKnown RBP eCLIP33.21■■■□□ 2.91
CPSF7-204ENST00000413232 MAPKBP1O60336 1514 aa33.21■■■□□ 2.91
CPSF7-204ENST00000413232 ABCC10Q5T3U5 1492 aa33.19■■■□□ 2.9
CPSF7-204ENST00000413232 IQGAP2Q13576 1575 aa33.18■■■□□ 2.9
CPSF7-204ENST00000413232 FAM69CQ0P6D2 419 aa33.17■■■□□ 2.9
CPSF7-204ENST00000413232 PTPRGP23470 1445 aa33.16■■■□□ 2.9
CPSF7-204ENST00000413232 TTBK1Q5TCY1 1321 aaPredicted RBP33.15■■■□□ 2.9
CPSF7-204ENST00000413232 DIP2BQ9P265 1576 aa33.14■■■□□ 2.9
CPSF7-204ENST00000413232 RAPGEF2Q9Y4G8 1499 aa33.11■■■□□ 2.89
CPSF7-204ENST00000413232 CARMIL2Q6F5E8 1435 aa33.1■■■□□ 2.89
CPSF7-204ENST00000413232 TNIKQ9UKE5 1360 aa33.09■■■□□ 2.89
CPSF7-204ENST00000413232 DISP1Q96F81 1524 aa33.07■■■□□ 2.88
CPSF7-204ENST00000413232 TSPOAP1O95153 1857 aa33■■■□□ 2.87
CPSF7-204ENST00000413232 UGGT2Q9NYU1 1516 aa32.99■■■□□ 2.87
CPSF7-204ENST00000413232 ABCC2Q92887 1545 aa32.97■■■□□ 2.87
CPSF7-204ENST00000413232 AEBP2Q6ZN18 517 aaPredicted RBP32.96■■■□□ 2.87
CPSF7-204ENST00000413232 UHRF1BP1LA0JNW5 1464 aa32.92■■■□□ 2.86
CPSF7-204ENST00000413232 UACAQ9BZF9 1416 aa32.91■■■□□ 2.86
CPSF7-204ENST00000413232 KIAA0556O60303 1618 aa32.9■■■□□ 2.86
CPSF7-204ENST00000413232 CTTNBP2Q8WZ74 1663 aa32.89■■■□□ 2.86
CPSF7-204ENST00000413232 ASXL2Q76L83 1435 aa32.87■■■□□ 2.85
CPSF7-204ENST00000413232 PRXQ9BXM0 1461 aa32.83■■■□□ 2.85
CPSF7-204ENST00000413232 PLB1Q6P1J6 1458 aa32.8■■■□□ 2.84
CPSF7-204ENST00000413232 KDM6BO15054 1643 aa32.8■■■□□ 2.84
CPSF7-204ENST00000413232 KDM5BQ9UGL1 1544 aa32.79■■■□□ 2.84
CPSF7-204ENST00000413232 PPRC1Q5VV67 1664 aaKnown RBP32.77■■■□□ 2.84
CPSF7-204ENST00000413232 ZCCHC11Q5TAX3 1644 aaKnown RBP32.76■■■□□ 2.83
CPSF7-204ENST00000413232 GLI2P10070 1586 aa32.75■■■□□ 2.83
CPSF7-204ENST00000413232 EPRSP07814 1512 aaKnown RBP32.67■■■□□ 2.82
CPSF7-204ENST00000413232 GOLGA3Q08378 1498 aa32.65■■■□□ 2.82
CPSF7-204ENST00000413232 MAP3K4Q9Y6R4 1608 aa32.62■■■□□ 2.81
CPSF7-204ENST00000413232 ABCA8O94911 1581 aa32.62■■■□□ 2.81
CPSF7-204ENST00000413232 CSRNP3Q8WYN3 585 aa32.58■■■□□ 2.81
CPSF7-204ENST00000413232 COL17A1Q9UMD9 1497 aaPredicted RBP32.54■■■□□ 2.8
CPSF7-204ENST00000413232 WDR7Q9Y4E6 1490 aa32.54■■■□□ 2.8
CPSF7-204ENST00000413232 KDM4FA0A1W2PPD8 638 aa32.52■■■□□ 2.8
CPSF7-204ENST00000413232 P3H3Q8IVL6 736 aa32.51■■■□□ 2.79
CPSF7-204ENST00000413232 KCNH8Q96L42 1107 aa32.42■■■□□ 2.78
CPSF7-204ENST00000413232 TEX14Q8IWB6 1497 aa32.42■■■□□ 2.78
CPSF7-204ENST00000413232 SAMD9Q5K651 1589 aa32.41■■■□□ 2.78
CPSF7-204ENST00000413232 ARID3CA6NKF2 412 aa32.39■■■□□ 2.78
CPSF7-204ENST00000413232 CFAP43Q8NDM7 1665 aa32.37■■■□□ 2.77
CPSF7-204ENST00000413232 EEA1Q15075 1411 aa32.36■■■□□ 2.77
CPSF7-204ENST00000413232 FAM9AQ8IZU1 332 aaPredicted RBP32.36■■■□□ 2.77
CPSF7-204ENST00000413232 ATP10BO94823 1461 aa32.35■■■□□ 2.77
CPSF7-204ENST00000413232 CD109Q6YHK3 1445 aa32.34■■■□□ 2.77
CPSF7-204ENST00000413232 MAGI3Q5TCQ9 1506 aa32.31■■■□□ 2.76
CPSF7-204ENST00000413232 RANGAP1P46060 587 aaPredicted RBP32.28■■■□□ 2.76
CPSF7-204ENST00000413232 RAPGEF6Q8TEU7 1601 aa32.26■■■□□ 2.76
CPSF7-204ENST00000413232 ADGRL1O94910 1474 aa32.22■■■□□ 2.75
CPSF7-204ENST00000413232 FHOD3Q2V2M9 1422 aa32.2■■■□□ 2.75
CPSF7-204ENST00000413232 KIF21BO75037 1637 aa32.19■■■□□ 2.74
CPSF7-204ENST00000413232 NUP153P49790 1475 aaKnown RBP32.16■■■□□ 2.74
CPSF7-204ENST00000413232 ABCA9Q8IUA7 1624 aa32.15■■■□□ 2.74
CPSF7-204ENST00000413232 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
CPSF7-204ENST00000413232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.09■■■□□ 2.73
CPSF7-204ENST00000413232 HNRNPUL2Q1KMD3 747 aaKnown RBP32.09■■■□□ 2.73
CPSF7-204ENST00000413232 ARAP3Q8WWN8 1544 aa32.06■■■□□ 2.72
CPSF7-204ENST00000413232 EHMT2Q96KQ7 1210 aa32.06■■■□□ 2.72
CPSF7-204ENST00000413232 EFCAB5A4FU69 1503 aa32.03■■■□□ 2.72
CPSF7-204ENST00000413232 UBTFP17480 764 aaKnown RBP31.94■■■□□ 2.7
CPSF7-204ENST00000413232 RAPGEF3O95398 923 aa31.93■■■□□ 2.7
CPSF7-204ENST00000413232 PHLDB1Q86UU1 1377 aa31.93■■■□□ 2.7
CPSF7-204ENST00000413232 PLEKHD1A6NEE1 506 aa31.92■■■□□ 2.7
CPSF7-204ENST00000413232 NEO1Q92859 1461 aa31.91■■■□□ 2.7
CPSF7-204ENST00000413232 CDK13Q14004 1512 aaKnown RBP31.88■■■□□ 2.69
CPSF7-204ENST00000413232 FRMPD1Q5SYB0 1578 aa31.87■■■□□ 2.69
CPSF7-204ENST00000413232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.86■■■□□ 2.69
CPSF7-204ENST00000413232 ARHGAP35Q9NRY4 1499 aa31.85■■■□□ 2.69
CPSF7-204ENST00000413232 TTC37Q6PGP7 1564 aa31.82■■■□□ 2.68
CPSF7-204ENST00000413232 HECW2Q9P2P5 1572 aa31.77■■■□□ 2.68
CPSF7-204ENST00000413232 RICTORQ6R327 1708 aa31.76■■■□□ 2.67
CPSF7-204ENST00000413232 AKNAQ7Z591 1439 aa31.75■■■□□ 2.67
CPSF7-204ENST00000413232 FANCAO15360 1455 aa31.75■■■□□ 2.67
CPSF7-204ENST00000413232 FMN1Q68DA7 1419 aa31.74■■■□□ 2.67
CPSF7-204ENST00000413232 ATP1B4Q9UN42 357 aaPredicted RBP31.73■■■□□ 2.67
CPSF7-204ENST00000413232 HECW1Q76N89 1606 aa31.71■■■□□ 2.67
CPSF7-204ENST00000413232 ADAMTSL3P82987 1691 aa31.71■■■□□ 2.67
CPSF7-204ENST00000413232 DENND4BO75064 1496 aaPredicted RBP31.7■■■□□ 2.66
CPSF7-204ENST00000413232 LRRIQ1Q96JM4 1722 aa31.69■■■□□ 2.66
CPSF7-204ENST00000413232 CFAP74Q9C0B2 1584 aa31.68■■■□□ 2.66
CPSF7-204ENST00000413232 BCORL1Q5H9F3 1711 aa31.65■■■□□ 2.66
CPSF7-204ENST00000413232 PLCH2O75038 1416 aa31.63■■■□□ 2.65
CPSF7-204ENST00000413232 ARHGEF40Q8TER5 1519 aa31.63■■■□□ 2.65
CPSF7-204ENST00000413232 KIF14Q15058 1648 aa31.61■■■□□ 2.65
CPSF7-204ENST00000413232 PTPRMP28827 1452 aa31.59■■■□□ 2.65
CPSF7-204ENST00000413232 ARID4BQ4LE39 1312 aaPredicted RBP31.58■■■□□ 2.65
CPSF7-204ENST00000413232 SIGLEC1Q9BZZ2 1709 aa31.58■■■□□ 2.65
CPSF7-204ENST00000413232 MYO5CQ9NQX4 1742 aa31.58■■■□□ 2.65
CPSF7-204ENST00000413232 MADDQ8WXG6 1647 aa31.57■■■□□ 2.64
CPSF7-204ENST00000413232 ZMYM4Q5VZL5 1548 aa31.57■■■□□ 2.64
CPSF7-204ENST00000413232 YEATS2Q9ULM3 1422 aa31.56■■■□□ 2.64
CPSF7-204ENST00000413232 SCAPERQ9BY12 1400 aa31.54■■■□□ 2.64
CPSF7-204ENST00000413232 TROQ12816 1431 aaPredicted RBP31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms