RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 SOGA1O94964 1423 aa14.41□□□□□ -0.1
CPSF7-203ENST00000413184 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-203ENST00000413184 PPRC1Q5VV67 1664 aaKnown RBP14.37□□□□□ -0.11
CPSF7-203ENST00000413184 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
CPSF7-203ENST00000413184 PTPRMP28827 1452 aa14.33□□□□□ -0.12
CPSF7-203ENST00000413184 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
CPSF7-203ENST00000413184 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
CPSF7-203ENST00000413184 HSPA2P54652 639 aa14.3□□□□□ -0.12
CPSF7-203ENST00000413184 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-203ENST00000413184 GRIN2AQ12879 1464 aa14.27□□□□□ -0.12
CPSF7-203ENST00000413184 NUP160Q12769 1436 aa14.25□□□□□ -0.13
CPSF7-203ENST00000413184 KIF21BO75037 1637 aa14.24□□□□□ -0.13
CPSF7-203ENST00000413184 GLI2P10070 1586 aa14.21□□□□□ -0.14
CPSF7-203ENST00000413184 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
CPSF7-203ENST00000413184 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
CPSF7-203ENST00000413184 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
CPSF7-203ENST00000413184 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
CPSF7-203ENST00000413184 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-203ENST00000413184 JPH4Q96JJ6 628 aa14.14□□□□□ -0.15
CPSF7-203ENST00000413184 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-203ENST00000413184 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
CPSF7-203ENST00000413184 PLB1Q6P1J6 1458 aa14.1□□□□□ -0.15
CPSF7-203ENST00000413184 MAP3K4Q9Y6R4 1608 aa14.09□□□□□ -0.15
CPSF7-203ENST00000413184 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
CPSF7-203ENST00000413184 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
CPSF7-203ENST00000413184 PLPPR3Q6T4P5 718 aa14.05□□□□□ -0.16
CPSF7-203ENST00000413184 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
CPSF7-203ENST00000413184 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
CPSF7-203ENST00000413184 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
CPSF7-203ENST00000413184 KIAA0586Q9BVV6 1533 aa14.02□□□□□ -0.16
CPSF7-203ENST00000413184 IQSEC2Q5JU85 1478 aa14.02□□□□□ -0.16
CPSF7-203ENST00000413184 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
CPSF7-203ENST00000413184 RIMS1Q86UR5 1692 aaKnown RBP14□□□□□ -0.17
CPSF7-203ENST00000413184 EPRSP07814 1512 aaKnown RBP13.99□□□□□ -0.17
CPSF7-203ENST00000413184 ABCC2Q92887 1545 aa13.98□□□□□ -0.17
CPSF7-203ENST00000413184 UBAP1LF5GYI3 381 aa13.97□□□□□ -0.17
CPSF7-203ENST00000413184 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
CPSF7-203ENST00000413184 YEATS2Q9ULM3 1422 aa13.97□□□□□ -0.17
CPSF7-203ENST00000413184 ARID4BQ4LE39 1312 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-203ENST00000413184 CUL7Q14999 1698 aa13.95□□□□□ -0.18
CPSF7-203ENST00000413184 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
CPSF7-203ENST00000413184 TTBK1Q5TCY1 1321 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-203ENST00000413184 CUX1P39880 1505 aa13.92□□□□□ -0.18
CPSF7-203ENST00000413184 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
CPSF7-203ENST00000413184 STRCQ7RTU9 1775 aa13.91□□□□□ -0.18
CPSF7-203ENST00000413184 CFAP43Q8NDM7 1665 aa13.91□□□□□ -0.18
CPSF7-203ENST00000413184 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
CPSF7-203ENST00000413184 HSPA1LP34931 641 aa13.89□□□□□ -0.19
CPSF7-203ENST00000413184 PTPRGP23470 1445 aa13.87□□□□□ -0.19
CPSF7-203ENST00000413184 PTPRTO14522 1441 aa13.86□□□□□ -0.19
CPSF7-203ENST00000413184 SCAF1Q9H7N4 1312 aaKnown RBP13.84□□□□□ -0.19
CPSF7-203ENST00000413184 MAGI3Q5TCQ9 1506 aa13.82□□□□□ -0.2
CPSF7-203ENST00000413184 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
CPSF7-203ENST00000413184 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
CPSF7-203ENST00000413184 CD109Q6YHK3 1445 aa13.81□□□□□ -0.2
CPSF7-203ENST00000413184 ARAP3Q8WWN8 1544 aa13.76□□□□□ -0.21
CPSF7-203ENST00000413184 UHRF1BP1LA0JNW5 1464 aa13.75□□□□□ -0.21
CPSF7-203ENST00000413184 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
CPSF7-203ENST00000413184 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
CPSF7-203ENST00000413184 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-203ENST00000413184 ZCCHC11Q5TAX3 1644 aaKnown RBP13.72□□□□□ -0.21
CPSF7-203ENST00000413184 KDM5BQ9UGL1 1544 aa13.71□□□□□ -0.21
CPSF7-203ENST00000413184 IFFO2Q5TF58 517 aa13.71□□□□□ -0.21
CPSF7-203ENST00000413184 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
CPSF7-203ENST00000413184 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
CPSF7-203ENST00000413184 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
CPSF7-203ENST00000413184 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
CPSF7-203ENST00000413184 RAPGEF3O95398 923 aa13.68□□□□□ -0.22
CPSF7-203ENST00000413184 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
CPSF7-203ENST00000413184 UHRF1BP1Q6BDS2 1440 aa13.67□□□□□ -0.22
CPSF7-203ENST00000413184 FER1L4A9Z1Z3 1794 aa13.67□□□□□ -0.22
CPSF7-203ENST00000413184 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
CPSF7-203ENST00000413184 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
CPSF7-203ENST00000413184 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-203ENST00000413184 MLECQ14165 292 aa13.63□□□□□ -0.23
CPSF7-203ENST00000413184 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
CPSF7-203ENST00000413184 TOM1O60784 492 aa13.62□□□□□ -0.23
CPSF7-203ENST00000413184 FANCAO15360 1455 aa13.61□□□□□ -0.23
CPSF7-203ENST00000413184 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
CPSF7-203ENST00000413184 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CPSF7-203ENST00000413184 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
CPSF7-203ENST00000413184 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-203ENST00000413184 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
CPSF7-203ENST00000413184 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-203ENST00000413184 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
CPSF7-203ENST00000413184 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
CPSF7-203ENST00000413184 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
CPSF7-203ENST00000413184 NCOA1Q15788 1441 aa13.54□□□□□ -0.24
CPSF7-203ENST00000413184 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
CPSF7-203ENST00000413184 AKNAQ7Z591 1439 aa13.5□□□□□ -0.25
CPSF7-203ENST00000413184 SIGLEC1Q9BZZ2 1709 aa13.49□□□□□ -0.25
CPSF7-203ENST00000413184 NEO1Q92859 1461 aa13.44□□□□□ -0.26
CPSF7-203ENST00000413184 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
CPSF7-203ENST00000413184 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CPSF7-203ENST00000413184 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
CPSF7-203ENST00000413184 PTPRKQ15262 1439 aa13.41□□□□□ -0.26
CPSF7-203ENST00000413184 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
CPSF7-203ENST00000413184 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
CPSF7-203ENST00000413184 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
CPSF7-203ENST00000413184 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms