RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
ZNF3-204ENST00000412947 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
ZNF3-204ENST00000412947 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
ZNF3-204ENST00000412947 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
ZNF3-204ENST00000412947 GOLGA3Q08378 1498 aa20.76■□□□□ 0.91
ZNF3-204ENST00000412947 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
ZNF3-204ENST00000412947 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
ZNF3-204ENST00000412947 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
ZNF3-204ENST00000412947 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
ZNF3-204ENST00000412947 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
ZNF3-204ENST00000412947 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
ZNF3-204ENST00000412947 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
ZNF3-204ENST00000412947 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
ZNF3-204ENST00000412947 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
ZNF3-204ENST00000412947 CARMIL2Q6F5E8 1435 aa20.66■□□□□ 0.9
ZNF3-204ENST00000412947 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
ZNF3-204ENST00000412947 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
ZNF3-204ENST00000412947 DISP1Q96F81 1524 aa20.59■□□□□ 0.89
ZNF3-204ENST00000412947 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
ZNF3-204ENST00000412947 KIAA0556O60303 1618 aa20.57■□□□□ 0.88
ZNF3-204ENST00000412947 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
ZNF3-204ENST00000412947 PTPRGP23470 1445 aa20.53■□□□□ 0.88
ZNF3-204ENST00000412947 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
ZNF3-204ENST00000412947 SAMD9Q5K651 1589 aa20.51■□□□□ 0.87
ZNF3-204ENST00000412947 EFCAB5A4FU69 1503 aa20.5■□□□□ 0.87
ZNF3-204ENST00000412947 P3H3Q8IVL6 736 aa20.5■□□□□ 0.87
ZNF3-204ENST00000412947 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
ZNF3-204ENST00000412947 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
ZNF3-204ENST00000412947 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
ZNF3-204ENST00000412947 CLIP1P30622 1438 aa20.4■□□□□ 0.86
ZNF3-204ENST00000412947 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
ZNF3-204ENST00000412947 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
ZNF3-204ENST00000412947 ADCY10Q96PN6 1610 aa20.36■□□□□ 0.85
ZNF3-204ENST00000412947 ABCC2Q92887 1545 aa20.35■□□□□ 0.85
ZNF3-204ENST00000412947 UHRF1BP1LA0JNW5 1464 aa20.35■□□□□ 0.85
ZNF3-204ENST00000412947 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
ZNF3-204ENST00000412947 NPM1P06748 294 aaKnown RBP eCLIP20.34■□□□□ 0.85
ZNF3-204ENST00000412947 ABCA8O94911 1581 aa20.33■□□□□ 0.84
ZNF3-204ENST00000412947 FMN1Q68DA7 1419 aa20.31■□□□□ 0.84
ZNF3-204ENST00000412947 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.84
ZNF3-204ENST00000412947 KDM5BQ9UGL1 1544 aa20.24■□□□□ 0.83
ZNF3-204ENST00000412947 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
ZNF3-204ENST00000412947 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
ZNF3-204ENST00000412947 NUP153P49790 1475 aaKnown RBP20.2■□□□□ 0.82
ZNF3-204ENST00000412947 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
ZNF3-204ENST00000412947 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
ZNF3-204ENST00000412947 HECW1Q76N89 1606 aa20.18■□□□□ 0.82
ZNF3-204ENST00000412947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
ZNF3-204ENST00000412947 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
ZNF3-204ENST00000412947 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
ZNF3-204ENST00000412947 ATP10BO94823 1461 aa20.17■□□□□ 0.82
ZNF3-204ENST00000412947 PCF11O94913 1555 aaKnown RBP20.16■□□□□ 0.82
ZNF3-204ENST00000412947 ASXL2Q76L83 1435 aa20.15■□□□□ 0.82
ZNF3-204ENST00000412947 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.81
ZNF3-204ENST00000412947 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
ZNF3-204ENST00000412947 EPRSP07814 1512 aaKnown RBP20.11■□□□□ 0.81
ZNF3-204ENST00000412947 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
ZNF3-204ENST00000412947 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
ZNF3-204ENST00000412947 CDK13Q14004 1512 aaKnown RBP20.09■□□□□ 0.81
ZNF3-204ENST00000412947 CCDC18Q5T9S5 1454 aa20.08■□□□□ 0.81
ZNF3-204ENST00000412947 ABCC10Q5T3U5 1492 aa20.07■□□□□ 0.8
ZNF3-204ENST00000412947 PLEKHD1A6NEE1 506 aa20.06■□□□□ 0.8
ZNF3-204ENST00000412947 FAM69CQ0P6D2 419 aa20.05■□□□□ 0.8
ZNF3-204ENST00000412947 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
ZNF3-204ENST00000412947 DIP2BQ9P265 1576 aa20.04■□□□□ 0.8
ZNF3-204ENST00000412947 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
ZNF3-204ENST00000412947 LRRIQ1Q96JM4 1722 aa20.01■□□□□ 0.79
ZNF3-204ENST00000412947 GLI2P10070 1586 aa19.99■□□□□ 0.79
ZNF3-204ENST00000412947 KIF13AQ9H1H9 1805 aa19.98■□□□□ 0.79
ZNF3-204ENST00000412947 TROQ12816 1431 aaPredicted RBP19.95■□□□□ 0.78
ZNF3-204ENST00000412947 APLP2Q06481 763 aa19.93■□□□□ 0.78
ZNF3-204ENST00000412947 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
ZNF3-204ENST00000412947 TIAM1Q13009 1591 aa19.9■□□□□ 0.78
ZNF3-204ENST00000412947 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
ZNF3-204ENST00000412947 KIF14Q15058 1648 aa19.89■□□□□ 0.77
ZNF3-204ENST00000412947 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
ZNF3-204ENST00000412947 CD109Q6YHK3 1445 aa19.89■□□□□ 0.77
ZNF3-204ENST00000412947 MAP3K4Q9Y6R4 1608 aa19.89■□□□□ 0.77
ZNF3-204ENST00000412947 ABCA9Q8IUA7 1624 aa19.88■□□□□ 0.77
ZNF3-204ENST00000412947 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
ZNF3-204ENST00000412947 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
ZNF3-204ENST00000412947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.86■□□□□ 0.77
ZNF3-204ENST00000412947 TSPOAP1O95153 1857 aa19.84■□□□□ 0.77
ZNF3-204ENST00000412947 TTC37Q6PGP7 1564 aa19.83■□□□□ 0.77
ZNF3-204ENST00000412947 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
ZNF3-204ENST00000412947 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
ZNF3-204ENST00000412947 PPRC1Q5VV67 1664 aaKnown RBP19.79■□□□□ 0.76
ZNF3-204ENST00000412947 KANK4Q5T7N3 995 aaPredicted RBP19.78■□□□□ 0.76
ZNF3-204ENST00000412947 PLCH2O75038 1416 aa19.76■□□□□ 0.75
ZNF3-204ENST00000412947 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
ZNF3-204ENST00000412947 MYO5CQ9NQX4 1742 aa19.75■□□□□ 0.75
ZNF3-204ENST00000412947 CCNB3Q8WWL7 1395 aa19.74■□□□□ 0.75
ZNF3-204ENST00000412947 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
ZNF3-204ENST00000412947 FANCAO15360 1455 aa19.73■□□□□ 0.75
ZNF3-204ENST00000412947 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
ZNF3-204ENST00000412947 NEO1Q92859 1461 aa19.73■□□□□ 0.75
ZNF3-204ENST00000412947 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
ZNF3-204ENST00000412947 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
ZNF3-204ENST00000412947 CFAP74Q9C0B2 1584 aa19.71■□□□□ 0.75
ZNF3-204ENST00000412947 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms