RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 CUL7Q14999 1698 aa21.98■■□□□ 1.11
LINC00388-201ENST00000412714 IGF1RP08069 1367 aa21.96■■□□□ 1.11
LINC00388-201ENST00000412714 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
LINC00388-201ENST00000412714 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
LINC00388-201ENST00000412714 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
LINC00388-201ENST00000412714 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
LINC00388-201ENST00000412714 ADCY10Q96PN6 1610 aa21.8■■□□□ 1.08
LINC00388-201ENST00000412714 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
LINC00388-201ENST00000412714 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
LINC00388-201ENST00000412714 ABCC10Q5T3U5 1492 aa21.76■■□□□ 1.07
LINC00388-201ENST00000412714 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
LINC00388-201ENST00000412714 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
LINC00388-201ENST00000412714 IQGAP2Q13576 1575 aa21.72■■□□□ 1.07
LINC00388-201ENST00000412714 PTPRGP23470 1445 aa21.72■■□□□ 1.07
LINC00388-201ENST00000412714 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
LINC00388-201ENST00000412714 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
LINC00388-201ENST00000412714 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
LINC00388-201ENST00000412714 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.06
LINC00388-201ENST00000412714 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
LINC00388-201ENST00000412714 DISP1Q96F81 1524 aa21.58■■□□□ 1.04
LINC00388-201ENST00000412714 TSPOAP1O95153 1857 aa21.58■■□□□ 1.04
LINC00388-201ENST00000412714 UGGT2Q9NYU1 1516 aa21.56■■□□□ 1.04
LINC00388-201ENST00000412714 UHRF1BP1LA0JNW5 1464 aa21.56■■□□□ 1.04
LINC00388-201ENST00000412714 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
LINC00388-201ENST00000412714 KDM6BO15054 1643 aa21.55■■□□□ 1.04
LINC00388-201ENST00000412714 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
LINC00388-201ENST00000412714 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
LINC00388-201ENST00000412714 KIAA0556O60303 1618 aa21.51■■□□□ 1.03
LINC00388-201ENST00000412714 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
LINC00388-201ENST00000412714 GLI2P10070 1586 aa21.46■■□□□ 1.03
LINC00388-201ENST00000412714 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
LINC00388-201ENST00000412714 GOLGA3Q08378 1498 aa21.42■■□□□ 1.02
LINC00388-201ENST00000412714 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
LINC00388-201ENST00000412714 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
LINC00388-201ENST00000412714 PPRC1Q5VV67 1664 aaKnown RBP21.39■■□□□ 1.01
LINC00388-201ENST00000412714 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.01
LINC00388-201ENST00000412714 MAP3K4Q9Y6R4 1608 aa21.34■■□□□ 1.01
LINC00388-201ENST00000412714 TEX14Q8IWB6 1497 aa21.32■■□□□ 1
LINC00388-201ENST00000412714 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
LINC00388-201ENST00000412714 ABCA8O94911 1581 aa21.3■■□□□ 1
LINC00388-201ENST00000412714 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
LINC00388-201ENST00000412714 KDM4FA0A1W2PPD8 638 aa21.27■■□□□ 1
LINC00388-201ENST00000412714 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
LINC00388-201ENST00000412714 COL17A1Q9UMD9 1497 aaPredicted RBP21.22■□□□□ 0.99
LINC00388-201ENST00000412714 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
LINC00388-201ENST00000412714 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
LINC00388-201ENST00000412714 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
LINC00388-201ENST00000412714 EEA1Q15075 1411 aa21.19■□□□□ 0.98
LINC00388-201ENST00000412714 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
LINC00388-201ENST00000412714 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
LINC00388-201ENST00000412714 SAMD9Q5K651 1589 aa21.16■□□□□ 0.98
LINC00388-201ENST00000412714 ADGRL1O94910 1474 aa21.14■□□□□ 0.98
LINC00388-201ENST00000412714 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
LINC00388-201ENST00000412714 ATP10BO94823 1461 aa21.12■□□□□ 0.97
LINC00388-201ENST00000412714 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
LINC00388-201ENST00000412714 RANGAP1P46060 587 aaPredicted RBP21.07■□□□□ 0.96
LINC00388-201ENST00000412714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.05■□□□□ 0.96
LINC00388-201ENST00000412714 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
LINC00388-201ENST00000412714 ABCA9Q8IUA7 1624 aa21.03■□□□□ 0.96
LINC00388-201ENST00000412714 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
LINC00388-201ENST00000412714 KIF21BO75037 1637 aa21■□□□□ 0.95
LINC00388-201ENST00000412714 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
LINC00388-201ENST00000412714 ARAP3Q8WWN8 1544 aa20.99■□□□□ 0.95
LINC00388-201ENST00000412714 EFCAB5A4FU69 1503 aa20.98■□□□□ 0.95
LINC00388-201ENST00000412714 PHLDB1Q86UU1 1377 aa20.97■□□□□ 0.95
LINC00388-201ENST00000412714 NEO1Q92859 1461 aa20.94■□□□□ 0.94
LINC00388-201ENST00000412714 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
LINC00388-201ENST00000412714 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
LINC00388-201ENST00000412714 UBTFP17480 764 aaKnown RBP20.87■□□□□ 0.93
LINC00388-201ENST00000412714 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
LINC00388-201ENST00000412714 HECW2Q9P2P5 1572 aa20.85■□□□□ 0.93
LINC00388-201ENST00000412714 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
LINC00388-201ENST00000412714 CFAP74Q9C0B2 1584 aa20.82■□□□□ 0.92
LINC00388-201ENST00000412714 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
LINC00388-201ENST00000412714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.81■□□□□ 0.92
LINC00388-201ENST00000412714 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
LINC00388-201ENST00000412714 FMN1Q68DA7 1419 aa20.79■□□□□ 0.92
LINC00388-201ENST00000412714 FANCAO15360 1455 aa20.79■□□□□ 0.92
LINC00388-201ENST00000412714 DENND4BO75064 1496 aaPredicted RBP20.79■□□□□ 0.92
LINC00388-201ENST00000412714 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
LINC00388-201ENST00000412714 TTC37Q6PGP7 1564 aa20.78■□□□□ 0.92
LINC00388-201ENST00000412714 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
LINC00388-201ENST00000412714 HECW1Q76N89 1606 aa20.77■□□□□ 0.92
LINC00388-201ENST00000412714 ARID4BQ4LE39 1312 aaPredicted RBP20.76■□□□□ 0.91
LINC00388-201ENST00000412714 RICTORQ6R327 1708 aa20.75■□□□□ 0.91
LINC00388-201ENST00000412714 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
LINC00388-201ENST00000412714 ADAMTSL3P82987 1691 aa20.75■□□□□ 0.91
LINC00388-201ENST00000412714 ARHGEF40Q8TER5 1519 aa20.74■□□□□ 0.91
LINC00388-201ENST00000412714 BCORL1Q5H9F3 1711 aa20.73■□□□□ 0.91
LINC00388-201ENST00000412714 PTPRMP28827 1452 aa20.72■□□□□ 0.91
LINC00388-201ENST00000412714 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
LINC00388-201ENST00000412714 PLCH2O75038 1416 aa20.69■□□□□ 0.9
LINC00388-201ENST00000412714 ZMYM4Q5VZL5 1548 aa20.68■□□□□ 0.9
LINC00388-201ENST00000412714 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
LINC00388-201ENST00000412714 ZFYVE16Q7Z3T8 1539 aa20.66■□□□□ 0.9
LINC00388-201ENST00000412714 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
LINC00388-201ENST00000412714 KIF14Q15058 1648 aa20.64■□□□□ 0.9
LINC00388-201ENST00000412714 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
LINC00388-201ENST00000412714 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.89
LINC00388-201ENST00000412714 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms