RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
CPSF4-202ENST00000412686 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
CPSF4-202ENST00000412686 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
CPSF4-202ENST00000412686 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
CPSF4-202ENST00000412686 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
CPSF4-202ENST00000412686 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
CPSF4-202ENST00000412686 ERCC6L2Q5T890 1561 aa12.97□□□□□ -0.33
CPSF4-202ENST00000412686 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.34
CPSF4-202ENST00000412686 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
CPSF4-202ENST00000412686 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
CPSF4-202ENST00000412686 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
CPSF4-202ENST00000412686 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
CPSF4-202ENST00000412686 EEA1Q15075 1411 aa12.91□□□□□ -0.34
CPSF4-202ENST00000412686 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
CPSF4-202ENST00000412686 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
CPSF4-202ENST00000412686 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
CPSF4-202ENST00000412686 IQGAP2Q13576 1575 aa12.88□□□□□ -0.35
CPSF4-202ENST00000412686 CTTNBP2Q8WZ74 1663 aa12.88□□□□□ -0.35
CPSF4-202ENST00000412686 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-202ENST00000412686 MSH5O43196 834 aa12.87□□□□□ -0.35
CPSF4-202ENST00000412686 KIF21BO75037 1637 aa12.84□□□□□ -0.35
CPSF4-202ENST00000412686 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
CPSF4-202ENST00000412686 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
CPSF4-202ENST00000412686 DISP1Q96F81 1524 aa12.79□□□□□ -0.36
CPSF4-202ENST00000412686 KIAA0556O60303 1618 aa12.77□□□□□ -0.36
CPSF4-202ENST00000412686 TTBK1Q5TCY1 1321 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-202ENST00000412686 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
CPSF4-202ENST00000412686 CARMIL2Q6F5E8 1435 aa12.74□□□□□ -0.37
CPSF4-202ENST00000412686 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-202ENST00000412686 TNIKQ9UKE5 1360 aa12.72□□□□□ -0.37
CPSF4-202ENST00000412686 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.37
CPSF4-202ENST00000412686 PTPRGP23470 1445 aa12.71□□□□□ -0.38
CPSF4-202ENST00000412686 SAMD9Q5K651 1589 aa12.7□□□□□ -0.38
CPSF4-202ENST00000412686 UBTFP17480 764 aaKnown RBP12.7□□□□□ -0.38
CPSF4-202ENST00000412686 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
CPSF4-202ENST00000412686 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
CPSF4-202ENST00000412686 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
CPSF4-202ENST00000412686 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
CPSF4-202ENST00000412686 ABCC2Q92887 1545 aa12.63□□□□□ -0.39
CPSF4-202ENST00000412686 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
CPSF4-202ENST00000412686 ABCA8O94911 1581 aa12.62□□□□□ -0.39
CPSF4-202ENST00000412686 UHRF1BP1LA0JNW5 1464 aa12.61□□□□□ -0.39
CPSF4-202ENST00000412686 ARHGAP35Q9NRY4 1499 aa12.61□□□□□ -0.39
CPSF4-202ENST00000412686 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
CPSF4-202ENST00000412686 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
CPSF4-202ENST00000412686 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
CPSF4-202ENST00000412686 MAPKBP1O60336 1514 aa12.57□□□□□ -0.4
CPSF4-202ENST00000412686 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPSF4-202ENST00000412686 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
CPSF4-202ENST00000412686 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
CPSF4-202ENST00000412686 ARID3CA6NKF2 412 aa12.56□□□□□ -0.4
CPSF4-202ENST00000412686 KIF13AQ9H1H9 1805 aa12.55□□□□□ -0.4
CPSF4-202ENST00000412686 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
CPSF4-202ENST00000412686 CLIP1P30622 1438 aa12.53□□□□□ -0.4
CPSF4-202ENST00000412686 ASXL2Q76L83 1435 aa12.53□□□□□ -0.4
CPSF4-202ENST00000412686 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
CPSF4-202ENST00000412686 ATP10BO94823 1461 aa12.51□□□□□ -0.41
CPSF4-202ENST00000412686 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
CPSF4-202ENST00000412686 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
CPSF4-202ENST00000412686 PCF11O94913 1555 aaKnown RBP12.48□□□□□ -0.41
CPSF4-202ENST00000412686 FMN1Q68DA7 1419 aa12.48□□□□□ -0.41
CPSF4-202ENST00000412686 FAM69CQ0P6D2 419 aa12.48□□□□□ -0.41
CPSF4-202ENST00000412686 LRRIQ1Q96JM4 1722 aa12.48□□□□□ -0.41
CPSF4-202ENST00000412686 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
CPSF4-202ENST00000412686 WDR7Q9Y4E6 1490 aa12.46□□□□□ -0.41
CPSF4-202ENST00000412686 HECW1Q76N89 1606 aa12.46□□□□□ -0.41
CPSF4-202ENST00000412686 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
CPSF4-202ENST00000412686 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
CPSF4-202ENST00000412686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-202ENST00000412686 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
CPSF4-202ENST00000412686 ATP1B4Q9UN42 357 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-202ENST00000412686 GLI2P10070 1586 aa12.43□□□□□ -0.42
CPSF4-202ENST00000412686 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
CPSF4-202ENST00000412686 PPRC1Q5VV67 1664 aaKnown RBP12.42□□□□□ -0.42
CPSF4-202ENST00000412686 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
CPSF4-202ENST00000412686 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
CPSF4-202ENST00000412686 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
CPSF4-202ENST00000412686 CFAP43Q8NDM7 1665 aa12.37□□□□□ -0.43
CPSF4-202ENST00000412686 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
CPSF4-202ENST00000412686 MAGI3Q5TCQ9 1506 aa12.36□□□□□ -0.43
CPSF4-202ENST00000412686 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
CPSF4-202ENST00000412686 KIF14Q15058 1648 aa12.35□□□□□ -0.43
CPSF4-202ENST00000412686 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
CPSF4-202ENST00000412686 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
CPSF4-202ENST00000412686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPSF4-202ENST00000412686 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
CPSF4-202ENST00000412686 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
CPSF4-202ENST00000412686 TROQ12816 1431 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-202ENST00000412686 KDM6BO15054 1643 aa12.3□□□□□ -0.44
CPSF4-202ENST00000412686 TEX14Q8IWB6 1497 aa12.29□□□□□ -0.44
CPSF4-202ENST00000412686 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-202ENST00000412686 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-202ENST00000412686 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
CPSF4-202ENST00000412686 MYO5CQ9NQX4 1742 aa12.26□□□□□ -0.45
CPSF4-202ENST00000412686 EHBP1L1Q8N3D4 1523 aa12.23□□□□□ -0.45
CPSF4-202ENST00000412686 MTUS2Q5JR59 1369 aa12.23□□□□□ -0.45
CPSF4-202ENST00000412686 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
CPSF4-202ENST00000412686 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
CPSF4-202ENST00000412686 FANCAO15360 1455 aa12.22□□□□□ -0.45
CPSF4-202ENST00000412686 PLCH2O75038 1416 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms