RNA–Protein interactions for RNA: ENST00000412167.6

KIT-202, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene KIT, Length 3,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-202ENST00000412167 KCNH8Q96L42 1107 aa15.58■□□□□ 0.08
KIT-202ENST00000412167 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
KIT-202ENST00000412167 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
KIT-202ENST00000412167 KIF21BO75037 1637 aa15.54■□□□□ 0.08
KIT-202ENST00000412167 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
KIT-202ENST00000412167 VPS8Q8N3P4 1428 aa15.53■□□□□ 0.08
KIT-202ENST00000412167 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
KIT-202ENST00000412167 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
KIT-202ENST00000412167 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
KIT-202ENST00000412167 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
KIT-202ENST00000412167 PRDM2Q13029 1718 aa15.46■□□□□ 0.06
KIT-202ENST00000412167 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
KIT-202ENST00000412167 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
KIT-202ENST00000412167 RRP7BPQ9NSQ0 103 aa15.43■□□□□ 0.06
KIT-202ENST00000412167 FHAD1B1AJZ9 1412 aa15.4■□□□□ 0.06
KIT-202ENST00000412167 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
KIT-202ENST00000412167 ZNF644Q9H582 1327 aaPredicted RBP15.37■□□□□ 0.05
KIT-202ENST00000412167 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
KIT-202ENST00000412167 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
KIT-202ENST00000412167 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
KIT-202ENST00000412167 WDR62O43379 1518 aa15.35■□□□□ 0.05
KIT-202ENST00000412167 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
KIT-202ENST00000412167 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.04
KIT-202ENST00000412167 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
KIT-202ENST00000412167 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
KIT-202ENST00000412167 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
KIT-202ENST00000412167 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
KIT-202ENST00000412167 ABCA5Q8WWZ7 1642 aa15.29■□□□□ 0.04
KIT-202ENST00000412167 CDK13Q14004 1512 aaKnown RBP15.29■□□□□ 0.04
KIT-202ENST00000412167 FOXD1Q16676 465 aa15.29■□□□□ 0.04
KIT-202ENST00000412167 PRG4Q92954 1404 aaPredicted RBP15.28■□□□□ 0.04
KIT-202ENST00000412167 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
KIT-202ENST00000412167 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
KIT-202ENST00000412167 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
KIT-202ENST00000412167 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
KIT-202ENST00000412167 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
KIT-202ENST00000412167 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
KIT-202ENST00000412167 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
KIT-202ENST00000412167 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
KIT-202ENST00000412167 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
KIT-202ENST00000412167 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
KIT-202ENST00000412167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
KIT-202ENST00000412167 PTPRGP23470 1445 aa15.22■□□□□ 0.03
KIT-202ENST00000412167 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
KIT-202ENST00000412167 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
KIT-202ENST00000412167 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
KIT-202ENST00000412167 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
KIT-202ENST00000412167 HNRNPMP52272 730 aaKnown RBP eCLIP15.2■□□□□ 0.02
KIT-202ENST00000412167 IQGAP2Q13576 1575 aa15.2■□□□□ 0.02
KIT-202ENST00000412167 CUL7Q14999 1698 aa15.19■□□□□ 0.02
KIT-202ENST00000412167 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
KIT-202ENST00000412167 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
KIT-202ENST00000412167 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
KIT-202ENST00000412167 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
KIT-202ENST00000412167 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
KIT-202ENST00000412167 KIAA0586Q9BVV6 1533 aa15.15■□□□□ 0.02
KIT-202ENST00000412167 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
KIT-202ENST00000412167 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
KIT-202ENST00000412167 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
KIT-202ENST00000412167 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
KIT-202ENST00000412167 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
KIT-202ENST00000412167 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
KIT-202ENST00000412167 RAB3GAP2Q9H2M9 1393 aa15.09■□□□□ 0.01
KIT-202ENST00000412167 POLR3GLQ9BT43 218 aa15.08■□□□□ 0
KIT-202ENST00000412167 TIAM1Q13009 1591 aa15.08■□□□□ 0
KIT-202ENST00000412167 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
KIT-202ENST00000412167 NCOA2Q15596 1464 aa15.06■□□□□ 0
KIT-202ENST00000412167 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
KIT-202ENST00000412167 EPRSP07814 1512 aaKnown RBP15.05■□□□□ 0
KIT-202ENST00000412167 CHD1O14646 1710 aa15.03■□□□□ -0
KIT-202ENST00000412167 MAGI3Q5TCQ9 1506 aa15.02□□□□□ -0.01
KIT-202ENST00000412167 FYCO1Q9BQS8 1478 aa15.02□□□□□ -0.01
KIT-202ENST00000412167 TSPY4P0CV99 314 aa15.01□□□□□ -0.01
KIT-202ENST00000412167 TSPY10P0CW01 314 aa15.01□□□□□ -0.01
KIT-202ENST00000412167 AFAP1Q8N556 730 aa15.01□□□□□ -0.01
KIT-202ENST00000412167 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
KIT-202ENST00000412167 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
KIT-202ENST00000412167 NUP160Q12769 1436 aa14.99□□□□□ -0.01
KIT-202ENST00000412167 FGD6Q6ZV73 1430 aa14.99□□□□□ -0.01
KIT-202ENST00000412167 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
KIT-202ENST00000412167 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
KIT-202ENST00000412167 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
KIT-202ENST00000412167 KDM2AQ9Y2K7 1162 aa14.99□□□□□ -0.01
KIT-202ENST00000412167 PTPRKQ15262 1439 aa14.98□□□□□ -0.01
KIT-202ENST00000412167 KIAA0556O60303 1618 aa14.97□□□□□ -0.01
KIT-202ENST00000412167 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
KIT-202ENST00000412167 MLECQ14165 292 aa14.96□□□□□ -0.02
KIT-202ENST00000412167 ATP10BO94823 1461 aa14.94□□□□□ -0.02
KIT-202ENST00000412167 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
KIT-202ENST00000412167 DHX57Q6P158 1386 aaKnown RBP14.93□□□□□ -0.02
KIT-202ENST00000412167 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
KIT-202ENST00000412167 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
KIT-202ENST00000412167 RAPGEF3O95398 923 aa14.91□□□□□ -0.02
KIT-202ENST00000412167 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
KIT-202ENST00000412167 UGGT2Q9NYU1 1516 aa14.91□□□□□ -0.02
KIT-202ENST00000412167 SAMD9Q5K651 1589 aa14.91□□□□□ -0.02
KIT-202ENST00000412167 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
KIT-202ENST00000412167 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
KIT-202ENST00000412167 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
KIT-202ENST00000412167 FAM69CQ0P6D2 419 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms