RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
CCDC196-203ENST00000411796 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
CCDC196-203ENST00000411796 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
CCDC196-203ENST00000411796 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
CCDC196-203ENST00000411796 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
CCDC196-203ENST00000411796 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
CCDC196-203ENST00000411796 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
CCDC196-203ENST00000411796 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
CCDC196-203ENST00000411796 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
CCDC196-203ENST00000411796 CUX2O14529 1486 aa15.12■□□□□ 0.01
CCDC196-203ENST00000411796 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
CCDC196-203ENST00000411796 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
CCDC196-203ENST00000411796 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
CCDC196-203ENST00000411796 SPOCK2Q92563 424 aa15.03■□□□□ -0
CCDC196-203ENST00000411796 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
CCDC196-203ENST00000411796 SUPT5HO00267 1087 aaKnown RBP14.98□□□□□ -0.01
CCDC196-203ENST00000411796 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC196-203ENST00000411796 WIZO95785 1651 aa14.97□□□□□ -0.01
CCDC196-203ENST00000411796 NUBP1P53384 320 aa14.96□□□□□ -0.01
CCDC196-203ENST00000411796 POTEHQ6S545 545 aa14.96□□□□□ -0.01
CCDC196-203ENST00000411796 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.02
CCDC196-203ENST00000411796 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
CCDC196-203ENST00000411796 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
CCDC196-203ENST00000411796 RTN4Q9NQC3 1192 aaKnown RBP14.87□□□□□ -0.03
CCDC196-203ENST00000411796 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
CCDC196-203ENST00000411796 DCAF8Q5TAQ9 597 aa14.81□□□□□ -0.04
CCDC196-203ENST00000411796 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
CCDC196-203ENST00000411796 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
CCDC196-203ENST00000411796 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
CCDC196-203ENST00000411796 FAM212AQ96EL1 285 aa14.78□□□□□ -0.04
CCDC196-203ENST00000411796 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
CCDC196-203ENST00000411796 PKD2Q13563 968 aa14.77□□□□□ -0.05
CCDC196-203ENST00000411796 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
CCDC196-203ENST00000411796 GSE1Q14687 1217 aa14.75□□□□□ -0.05
CCDC196-203ENST00000411796 HAX1O00165 279 aa14.74□□□□□ -0.05
CCDC196-203ENST00000411796 CD44P16070 742 aaKnown RBP14.74□□□□□ -0.05
CCDC196-203ENST00000411796 CFTRP13569 1480 aa14.73□□□□□ -0.05
CCDC196-203ENST00000411796 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
CCDC196-203ENST00000411796 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
CCDC196-203ENST00000411796 EVX2Q03828 476 aa14.68□□□□□ -0.06
CCDC196-203ENST00000411796 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
CCDC196-203ENST00000411796 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
CCDC196-203ENST00000411796 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
CCDC196-203ENST00000411796 ECM2O94769 699 aaPredicted RBP14.63□□□□□ -0.07
CCDC196-203ENST00000411796 PYGBP11216 843 aa14.61□□□□□ -0.07
CCDC196-203ENST00000411796 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
CCDC196-203ENST00000411796 PHF12Q96QT6 1004 aa14.56□□□□□ -0.08
CCDC196-203ENST00000411796 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
CCDC196-203ENST00000411796 NESP48681 1621 aa14.55□□□□□ -0.08
CCDC196-203ENST00000411796 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
CCDC196-203ENST00000411796 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
CCDC196-203ENST00000411796 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
CCDC196-203ENST00000411796 RGL2O15211 777 aa14.51□□□□□ -0.09
CCDC196-203ENST00000411796 MAP3K13O43283 966 aa14.5□□□□□ -0.09
CCDC196-203ENST00000411796 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
CCDC196-203ENST00000411796 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
CCDC196-203ENST00000411796 PCDHB13Q9Y5F0 798 aa14.44□□□□□ -0.1
CCDC196-203ENST00000411796 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
CCDC196-203ENST00000411796 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
CCDC196-203ENST00000411796 PCDHB8Q9UN66 801 aa14.42□□□□□ -0.1
CCDC196-203ENST00000411796 SGIP1Q9BQI5 828 aa14.41□□□□□ -0.1
CCDC196-203ENST00000411796 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
CCDC196-203ENST00000411796 IFNL1Q8IU54 200 aa14.4□□□□□ -0.1
CCDC196-203ENST00000411796 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
CCDC196-203ENST00000411796 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
CCDC196-203ENST00000411796 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
CCDC196-203ENST00000411796 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
CCDC196-203ENST00000411796 GABBR2O75899 941 aa14.35□□□□□ -0.11
CCDC196-203ENST00000411796 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
CCDC196-203ENST00000411796 CLCN6P51797 869 aa14.34□□□□□ -0.11
CCDC196-203ENST00000411796 SP7Q8TDD2 431 aaPredicted RBP14.33□□□□□ -0.12
CCDC196-203ENST00000411796 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
CCDC196-203ENST00000411796 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
CCDC196-203ENST00000411796 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
CCDC196-203ENST00000411796 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
CCDC196-203ENST00000411796 WDR62O43379 1518 aa14.28□□□□□ -0.12
CCDC196-203ENST00000411796 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
CCDC196-203ENST00000411796 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
CCDC196-203ENST00000411796 PSEN1P49768 467 aa14.26□□□□□ -0.13
CCDC196-203ENST00000411796 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
CCDC196-203ENST00000411796 TAOK2Q9UL54 1235 aa14.26□□□□□ -0.13
CCDC196-203ENST00000411796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
CCDC196-203ENST00000411796 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
CCDC196-203ENST00000411796 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
CCDC196-203ENST00000411796 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
CCDC196-203ENST00000411796 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
CCDC196-203ENST00000411796 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
CCDC196-203ENST00000411796 CHGAP10645 457 aaKnown RBP14.23□□□□□ -0.13
CCDC196-203ENST00000411796 CUX1P39880 1505 aa14.23□□□□□ -0.13
CCDC196-203ENST00000411796 BIVM-ERCC5R4GMW8 1640 aa14.22□□□□□ -0.13
CCDC196-203ENST00000411796 SOGA1O94964 1423 aa14.2□□□□□ -0.14
CCDC196-203ENST00000411796 STK25O00506 426 aa14.19□□□□□ -0.14
CCDC196-203ENST00000411796 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
CCDC196-203ENST00000411796 EEA1Q15075 1411 aa14.17□□□□□ -0.14
CCDC196-203ENST00000411796 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
CCDC196-203ENST00000411796 TIE1P35590 1138 aa14.17□□□□□ -0.14
CCDC196-203ENST00000411796 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
CCDC196-203ENST00000411796 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
CCDC196-203ENST00000411796 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
CCDC196-203ENST00000411796 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms