RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 TRIM26Q12899 539 aaPredicted RBP30.1■■■□□ 2.41
CRKL-202ENST00000411769 FBLN2P98095 1184 aa30.03■■■□□ 2.4
CRKL-202ENST00000411769 SYNJ2O15056 1496 aa30■■■□□ 2.39
CRKL-202ENST00000411769 CHD1O14646 1710 aa30■■■□□ 2.39
CRKL-202ENST00000411769 ARHGAP35Q9NRY4 1499 aa29.99■■■□□ 2.39
CRKL-202ENST00000411769 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
CRKL-202ENST00000411769 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
CRKL-202ENST00000411769 GRIN2AQ12879 1464 aa29.92■■■□□ 2.38
CRKL-202ENST00000411769 VPS8Q8N3P4 1428 aa29.92■■■□□ 2.38
CRKL-202ENST00000411769 PPARGC1BQ86YN6 1023 aaKnown RBP29.91■■■□□ 2.38
CRKL-202ENST00000411769 OSCARQ8IYS5 282 aa29.83■■■□□ 2.37
CRKL-202ENST00000411769 IQGAP2Q13576 1575 aa29.82■■■□□ 2.36
CRKL-202ENST00000411769 P3H3Q8IVL6 736 aa29.8■■■□□ 2.36
CRKL-202ENST00000411769 EFCAB5A4FU69 1503 aa29.79■■■□□ 2.36
CRKL-202ENST00000411769 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
CRKL-202ENST00000411769 SAMD9Q5K651 1589 aa29.75■■■□□ 2.35
CRKL-202ENST00000411769 FHOD3Q2V2M9 1422 aa29.75■■■□□ 2.35
CRKL-202ENST00000411769 NUP160Q12769 1436 aa29.73■■■□□ 2.35
CRKL-202ENST00000411769 KIAA0586Q9BVV6 1533 aa29.73■■■□□ 2.35
CRKL-202ENST00000411769 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
CRKL-202ENST00000411769 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
CRKL-202ENST00000411769 UGGT2Q9NYU1 1516 aa29.64■■■□□ 2.33
CRKL-202ENST00000411769 PCF11O94913 1555 aaKnown RBP29.59■■■□□ 2.33
CRKL-202ENST00000411769 APLP2Q06481 763 aa29.59■■■□□ 2.33
CRKL-202ENST00000411769 DISP1Q96F81 1524 aa29.53■■■□□ 2.32
CRKL-202ENST00000411769 KIAA0556O60303 1618 aa29.53■■■□□ 2.32
CRKL-202ENST00000411769 FMN1Q68DA7 1419 aa29.53■■■□□ 2.32
CRKL-202ENST00000411769 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
CRKL-202ENST00000411769 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
CRKL-202ENST00000411769 FYCO1Q9BQS8 1478 aa29.46■■■□□ 2.31
CRKL-202ENST00000411769 CASKIN1Q8WXD9 1431 aa29.46■■■□□ 2.31
CRKL-202ENST00000411769 ATP1B4Q9UN42 357 aaPredicted RBP29.45■■■□□ 2.31
CRKL-202ENST00000411769 SHROOM2Q13796 1616 aa29.45■■■□□ 2.31
CRKL-202ENST00000411769 ZEB1P37275 1124 aaPredicted RBP29.43■■■□□ 2.3
CRKL-202ENST00000411769 KANK4Q5T7N3 995 aaPredicted RBP29.43■■■□□ 2.3
CRKL-202ENST00000411769 TIAM1Q13009 1591 aa29.43■■■□□ 2.3
CRKL-202ENST00000411769 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.3
CRKL-202ENST00000411769 LRRIQ1Q96JM4 1722 aa29.39■■■□□ 2.3
CRKL-202ENST00000411769 CFAP43Q8NDM7 1665 aa29.39■■■□□ 2.3
CRKL-202ENST00000411769 MAP3K1Q13233 1512 aa29.36■■■□□ 2.29
CRKL-202ENST00000411769 PRG4Q92954 1404 aaPredicted RBP29.36■■■□□ 2.29
CRKL-202ENST00000411769 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
CRKL-202ENST00000411769 CARMIL2Q6F5E8 1435 aa29.34■■■□□ 2.29
CRKL-202ENST00000411769 RIMBP3CA6NJZ7 1639 aa29.32■■■□□ 2.28
CRKL-202ENST00000411769 RIMBP3BA6NNM3 1639 aa29.32■■■□□ 2.28
CRKL-202ENST00000411769 RIMBP3Q9UFD9 1639 aa29.32■■■□□ 2.28
CRKL-202ENST00000411769 HECW1Q76N89 1606 aa29.28■■■□□ 2.28
CRKL-202ENST00000411769 LRRC9Q6ZRR7 1453 aa29.27■■■□□ 2.28
CRKL-202ENST00000411769 RAPGEF6Q8TEU7 1601 aa29.23■■■□□ 2.27
CRKL-202ENST00000411769 PLB1Q6P1J6 1458 aa29.18■■■□□ 2.26
CRKL-202ENST00000411769 EPRSP07814 1512 aaKnown RBP29.17■■■□□ 2.26
CRKL-202ENST00000411769 ARID3CA6NKF2 412 aa29.16■■■□□ 2.26
CRKL-202ENST00000411769 CDK13Q14004 1512 aaKnown RBP29.16■■■□□ 2.26
CRKL-202ENST00000411769 CCDC18Q5T9S5 1454 aa29.16■■■□□ 2.26
CRKL-202ENST00000411769 NUP153P49790 1475 aaKnown RBP29.14■■■□□ 2.26
CRKL-202ENST00000411769 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
CRKL-202ENST00000411769 MAGI3Q5TCQ9 1506 aa29.09■■■□□ 2.25
CRKL-202ENST00000411769 MTUS2Q5JR59 1369 aa29.09■■■□□ 2.25
CRKL-202ENST00000411769 PTPRGP23470 1445 aa29.09■■■□□ 2.25
CRKL-202ENST00000411769 ABCA8O94911 1581 aa29.08■■■□□ 2.25
CRKL-202ENST00000411769 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
CRKL-202ENST00000411769 PHLDB1Q86UU1 1377 aa29.03■■■□□ 2.24
CRKL-202ENST00000411769 RRBP1Q9P2E9 1410 aaKnown RBP29■■■□□ 2.23
CRKL-202ENST00000411769 SUPT6HQ7KZ85 1726 aaKnown RBP28.99■■■□□ 2.23
CRKL-202ENST00000411769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.98■■■□□ 2.23
CRKL-202ENST00000411769 HNRNPUL2Q1KMD3 747 aaKnown RBP28.98■■■□□ 2.23
CRKL-202ENST00000411769 NCOA2Q15596 1464 aa28.94■■■□□ 2.22
CRKL-202ENST00000411769 CCNB3Q8WWL7 1395 aa28.92■■■□□ 2.22
CRKL-202ENST00000411769 UACAQ9BZF9 1416 aa28.92■■■□□ 2.22
CRKL-202ENST00000411769 ATP10BO94823 1461 aa28.89■■■□□ 2.22
CRKL-202ENST00000411769 ADCY10Q96PN6 1610 aa28.87■■■□□ 2.21
CRKL-202ENST00000411769 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
CRKL-202ENST00000411769 CDK11AQ9UQ88 783 aaPredicted RBP28.85■■■□□ 2.21
CRKL-202ENST00000411769 TROQ12816 1431 aaPredicted RBP28.81■■■□□ 2.2
CRKL-202ENST00000411769 MYOM3Q5VTT5 1437 aa28.8■■■□□ 2.2
CRKL-202ENST00000411769 FGD6Q6ZV73 1430 aa28.8■■■□□ 2.2
CRKL-202ENST00000411769 UHRF1BP1LA0JNW5 1464 aa28.79■■■□□ 2.2
CRKL-202ENST00000411769 KIF14Q15058 1648 aa28.77■■■□□ 2.2
CRKL-202ENST00000411769 FAM50AQ14320 339 aaKnown RBP28.77■■■□□ 2.2
CRKL-202ENST00000411769 ITGAEP38570 1179 aa28.74■■■□□ 2.19
CRKL-202ENST00000411769 CCER1Q8TC90 406 aaPredicted RBP28.74■■■□□ 2.19
CRKL-202ENST00000411769 PLEKHD1A6NEE1 506 aa28.73■■■□□ 2.19
CRKL-202ENST00000411769 ZCCHC11Q5TAX3 1644 aaKnown RBP28.71■■■□□ 2.19
CRKL-202ENST00000411769 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
CRKL-202ENST00000411769 KDM5BQ9UGL1 1544 aa28.68■■■□□ 2.18
CRKL-202ENST00000411769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.65■■■□□ 2.18
CRKL-202ENST00000411769 NPM1P06748 294 aaKnown RBP eCLIP28.63■■■□□ 2.17
CRKL-202ENST00000411769 ITSN2Q9NZM3 1697 aa28.6■■■□□ 2.17
CRKL-202ENST00000411769 MIA2Q96PC5 1412 aa28.6■■■□□ 2.17
CRKL-202ENST00000411769 TCOF1Q13428 1488 aaKnown RBP28.59■■■□□ 2.17
CRKL-202ENST00000411769 ABCC10Q5T3U5 1492 aa28.58■■■□□ 2.17
CRKL-202ENST00000411769 CDC42BPAQ5VT25 1732 aa28.58■■■□□ 2.17
CRKL-202ENST00000411769 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
CRKL-202ENST00000411769 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
CRKL-202ENST00000411769 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
CRKL-202ENST00000411769 PTPRKQ15262 1439 aa28.5■■■□□ 2.15
CRKL-202ENST00000411769 TTC37Q6PGP7 1564 aa28.5■■■□□ 2.15
CRKL-202ENST00000411769 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
CRKL-202ENST00000411769 CFDP1Q9UEE9 299 aaPredicted RBP28.48■■■□□ 2.15
CRKL-202ENST00000411769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.48■■■□□ 2.156e-21■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms