RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 NPM1P06748 294 aaKnown RBP eCLIP9.32□□□□□ -0.92
RNU4-25P-201ENST00000410569 CUX2O14529 1486 aa9.31□□□□□ -0.92
RNU4-25P-201ENST00000410569 MIER1Q8N108 512 aa9.29□□□□□ -0.92
RNU4-25P-201ENST00000410569 GABBR2O75899 941 aa9.27□□□□□ -0.93
RNU4-25P-201ENST00000410569 FBXO3Q9UK99 471 aa9.27□□□□□ -0.93
RNU4-25P-201ENST00000410569 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
RNU4-25P-201ENST00000410569 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
RNU4-25P-201ENST00000410569 ZNF579Q8NAF0 562 aaKnown RBP9.25□□□□□ -0.93
RNU4-25P-201ENST00000410569 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
RNU4-25P-201ENST00000410569 ERCC6Q03468 1493 aa9.24□□□□□ -0.93
RNU4-25P-201ENST00000410569 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
RNU4-25P-201ENST00000410569 CLCN6P51797 869 aa9.22□□□□□ -0.93
RNU4-25P-201ENST00000410569 NCAPD3P42695 1498 aa9.2□□□□□ -0.94
RNU4-25P-201ENST00000410569 THOC2Q8NI27 1593 aaKnown RBP9.19□□□□□ -0.94
RNU4-25P-201ENST00000410569 HMGXB3Q12766 1538 aa9.18□□□□□ -0.94
RNU4-25P-201ENST00000410569 ZBTB47Q9UFB7 747 aaPredicted RBP9.18□□□□□ -0.94
RNU4-25P-201ENST00000410569 NESP48681 1621 aa9.17□□□□□ -0.94
RNU4-25P-201ENST00000410569 SMARCA4P51532 1647 aa9.17□□□□□ -0.94
RNU4-25P-201ENST00000410569 ATAD2BQ9ULI0 1458 aa9.17□□□□□ -0.94
RNU4-25P-201ENST00000410569 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
RNU4-25P-201ENST00000410569 PHF12Q96QT6 1004 aa9.15□□□□□ -0.94
RNU4-25P-201ENST00000410569 SMARCA2P51531 1590 aa9.15□□□□□ -0.95
RNU4-25P-201ENST00000410569 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
RNU4-25P-201ENST00000410569 TSPYL2Q9H2G4 693 aaPredicted RBP9.14□□□□□ -0.95
RNU4-25P-201ENST00000410569 NUBP1P53384 320 aa9.13□□□□□ -0.95
RNU4-25P-201ENST00000410569 CCDC61Q9Y6R9 512 aa9.13□□□□□ -0.95
RNU4-25P-201ENST00000410569 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
RNU4-25P-201ENST00000410569 GALR2O43603 387 aaPredicted RBP9.1□□□□□ -0.95
RNU4-25P-201ENST00000410569 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
RNU4-25P-201ENST00000410569 LAMC3Q9Y6N6 1575 aa9.08□□□□□ -0.96
RNU4-25P-201ENST00000410569 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
RNU4-25P-201ENST00000410569 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
RNU4-25P-201ENST00000410569 BAZ1AQ9NRL2 1556 aaPredicted RBP9.06□□□□□ -0.96
RNU4-25P-201ENST00000410569 KIF12Q96FN5 646 aa9.05□□□□□ -0.96
RNU4-25P-201ENST00000410569 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
RNU4-25P-201ENST00000410569 DCBLD2Q96PD2 775 aa9.04□□□□□ -0.96
RNU4-25P-201ENST00000410569 KLHL34Q8N239 644 aa9.03□□□□□ -0.96
RNU4-25P-201ENST00000410569 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
RNU4-25P-201ENST00000410569 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
RNU4-25P-201ENST00000410569 MROH2BQ7Z745 1585 aa8.99□□□□□ -0.97
RNU4-25P-201ENST00000410569 MAP3K13O43283 966 aa8.99□□□□□ -0.97
RNU4-25P-201ENST00000410569 WDR62O43379 1518 aa8.97□□□□□ -0.97
RNU4-25P-201ENST00000410569 DCAF8Q5TAQ9 597 aa8.97□□□□□ -0.97
RNU4-25P-201ENST00000410569 SGIP1Q9BQI5 828 aa8.96□□□□□ -0.98
RNU4-25P-201ENST00000410569 PDS5BQ9NTI5 1447 aa8.96□□□□□ -0.98
RNU4-25P-201ENST00000410569 ASTLQ6HA08 431 aaPredicted RBP8.95□□□□□ -0.98
RNU4-25P-201ENST00000410569 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
RNU4-25P-201ENST00000410569 SPOCK2Q92563 424 aa8.95□□□□□ -0.98
RNU4-25P-201ENST00000410569 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
RNU4-25P-201ENST00000410569 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
RNU4-25P-201ENST00000410569 GSE1Q14687 1217 aa8.93□□□□□ -0.98
RNU4-25P-201ENST00000410569 TRPC6Q9Y210 931 aa8.93□□□□□ -0.98
RNU4-25P-201ENST00000410569 PCDHB13Q9Y5F0 798 aa8.92□□□□□ -0.98
RNU4-25P-201ENST00000410569 PELP1Q8IZL8 1130 aaKnown RBP8.91□□□□□ -0.98
RNU4-25P-201ENST00000410569 PYGBP11216 843 aa8.9□□□□□ -0.98
RNU4-25P-201ENST00000410569 TIE1P35590 1138 aa8.9□□□□□ -0.98
RNU4-25P-201ENST00000410569 BMP2KQ9NSY1 1161 aaPredicted RBP8.9□□□□□ -0.98
RNU4-25P-201ENST00000410569 WIZO95785 1651 aa8.9□□□□□ -0.98
RNU4-25P-201ENST00000410569 LHX8Q68G74 356 aa8.89□□□□□ -0.99
RNU4-25P-201ENST00000410569 IFNL1Q8IU54 200 aa8.89□□□□□ -0.99
RNU4-25P-201ENST00000410569 CADPSQ9ULU8 1353 aa8.88□□□□□ -0.99
RNU4-25P-201ENST00000410569 CEP164Q9UPV0 1460 aa8.88□□□□□ -0.99
RNU4-25P-201ENST00000410569 ATN1P54259 1190 aaPredicted RBP8.87□□□□□ -0.99
RNU4-25P-201ENST00000410569 CHRM1P11229 460 aaPredicted RBP8.86□□□□□ -0.99
RNU4-25P-201ENST00000410569 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
RNU4-25P-201ENST00000410569 SLC39A7Q92504 469 aa8.85□□□□□ -0.99
RNU4-25P-201ENST00000410569 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
RNU4-25P-201ENST00000410569 C7P10643 843 aa8.83□□□□□ -1
RNU4-25P-201ENST00000410569 CIZ1Q9ULV3 898 aaPredicted RBP8.83□□□□□ -1
RNU4-25P-201ENST00000410569 METRNQ9UJH8 293 aa8.82□□□□□ -1
RNU4-25P-201ENST00000410569 RIMBP3CA6NJZ7 1639 aa8.82□□□□□ -1
RNU4-25P-201ENST00000410569 RIMBP3BA6NNM3 1639 aa8.82□□□□□ -1
RNU4-25P-201ENST00000410569 RIMBP3Q9UFD9 1639 aa8.82□□□□□ -1
RNU4-25P-201ENST00000410569 PRDM2Q13029 1718 aa8.82□□□□□ -1
RNU4-25P-201ENST00000410569 PCDHB8Q9UN66 801 aa8.81□□□□□ -1
RNU4-25P-201ENST00000410569 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
RNU4-25P-201ENST00000410569 ZNF467Q7Z7K2 595 aaPredicted RBP8.8□□□□□ -1
RNU4-25P-201ENST00000410569 CFTRP13569 1480 aa8.79□□□□□ -1
RNU4-25P-201ENST00000410569 TMEM106CQ9BVX2 250 aa8.79□□□□□ -1
RNU4-25P-201ENST00000410569 POTEB2H3BUK9 544 aa8.78□□□□□ -1
RNU4-25P-201ENST00000410569 TRIM35Q9UPQ4 493 aa8.78□□□□□ -1
RNU4-25P-201ENST00000410569 TOP2AP11388 1531 aaKnown RBP8.76□□□□□ -1.01
RNU4-25P-201ENST00000410569 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
RNU4-25P-201ENST00000410569 IER5LQ5T953 404 aa8.75□□□□□ -1.01
RNU4-25P-201ENST00000410569 ARHGEF11O15085 1522 aa8.74□□□□□ -1.01
RNU4-25P-201ENST00000410569 ZNF608Q9ULD9 1512 aaPredicted RBP8.72□□□□□ -1.01
RNU4-25P-201ENST00000410569 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
RNU4-25P-201ENST00000410569 POTEJP0CG39 1038 aa8.71□□□□□ -1.02
RNU4-25P-201ENST00000410569 PSEN1P49768 467 aa8.71□□□□□ -1.02
RNU4-25P-201ENST00000410569 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
RNU4-25P-201ENST00000410569 CHD1O14646 1710 aa8.71□□□□□ -1.02
RNU4-25P-201ENST00000410569 PDAP1Q13442 181 aaKnown RBP8.7□□□□□ -1.02
RNU4-25P-201ENST00000410569 OTUD5Q96G74 571 aa8.7□□□□□ -1.02
RNU4-25P-201ENST00000410569 RSF1Q96T23 1441 aaPredicted RBP8.69□□□□□ -1.02
RNU4-25P-201ENST00000410569 SEC24BO95487 1268 aa8.68□□□□□ -1.02
RNU4-25P-201ENST00000410569 IFT140Q96RY7 1462 aa8.68□□□□□ -1.02
RNU4-25P-201ENST00000410569 IRX5P78411 483 aaPredicted RBP8.67□□□□□ -1.02
RNU4-25P-201ENST00000410569 TOPBP1Q92547 1522 aa8.66□□□□□ -1.02
RNU4-25P-201ENST00000410569 TARBP1Q13395 1621 aaKnown RBP8.65□□□□□ -1.03
RNU4-25P-201ENST00000410569 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms