RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 CUL7Q14999 1698 aa16.67■□□□□ 0.26
LRRTM4-204ENST00000409884 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
LRRTM4-204ENST00000409884 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
LRRTM4-204ENST00000409884 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
LRRTM4-204ENST00000409884 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
LRRTM4-204ENST00000409884 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
LRRTM4-204ENST00000409884 P3H3Q8IVL6 736 aa16.61■□□□□ 0.25
LRRTM4-204ENST00000409884 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
LRRTM4-204ENST00000409884 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
LRRTM4-204ENST00000409884 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.24
LRRTM4-204ENST00000409884 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
LRRTM4-204ENST00000409884 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
LRRTM4-204ENST00000409884 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
LRRTM4-204ENST00000409884 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
LRRTM4-204ENST00000409884 FBLN2P98095 1184 aa16.53■□□□□ 0.24
LRRTM4-204ENST00000409884 FHOD3Q2V2M9 1422 aa16.48■□□□□ 0.23
LRRTM4-204ENST00000409884 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
LRRTM4-204ENST00000409884 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
LRRTM4-204ENST00000409884 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
LRRTM4-204ENST00000409884 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
LRRTM4-204ENST00000409884 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
LRRTM4-204ENST00000409884 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
LRRTM4-204ENST00000409884 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
LRRTM4-204ENST00000409884 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
LRRTM4-204ENST00000409884 EFCAB5A4FU69 1503 aa16.37■□□□□ 0.21
LRRTM4-204ENST00000409884 SAMD9Q5K651 1589 aa16.37■□□□□ 0.21
LRRTM4-204ENST00000409884 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
LRRTM4-204ENST00000409884 KIAA0586Q9BVV6 1533 aa16.34■□□□□ 0.21
LRRTM4-204ENST00000409884 NUP160Q12769 1436 aa16.3■□□□□ 0.2
LRRTM4-204ENST00000409884 CHD1O14646 1710 aa16.29■□□□□ 0.2
LRRTM4-204ENST00000409884 DISP1Q96F81 1524 aa16.28■□□□□ 0.2
LRRTM4-204ENST00000409884 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
LRRTM4-204ENST00000409884 ARID3CA6NKF2 412 aa16.27■□□□□ 0.2
LRRTM4-204ENST00000409884 FMN1Q68DA7 1419 aa16.27■□□□□ 0.19
LRRTM4-204ENST00000409884 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
LRRTM4-204ENST00000409884 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
LRRTM4-204ENST00000409884 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
LRRTM4-204ENST00000409884 FYCO1Q9BQS8 1478 aa16.24■□□□□ 0.19
LRRTM4-204ENST00000409884 KIAA0556O60303 1618 aa16.24■□□□□ 0.19
LRRTM4-204ENST00000409884 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
LRRTM4-204ENST00000409884 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
LRRTM4-204ENST00000409884 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
LRRTM4-204ENST00000409884 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
LRRTM4-204ENST00000409884 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
LRRTM4-204ENST00000409884 PRG4Q92954 1404 aaPredicted RBP16.15■□□□□ 0.18
LRRTM4-204ENST00000409884 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
LRRTM4-204ENST00000409884 PLB1Q6P1J6 1458 aa16.13■□□□□ 0.17
LRRTM4-204ENST00000409884 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
LRRTM4-204ENST00000409884 CARMIL2Q6F5E8 1435 aa16.12■□□□□ 0.17
LRRTM4-204ENST00000409884 CENPBP07199 599 aaPredicted RBP16.12■□□□□ 0.17
LRRTM4-204ENST00000409884 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
LRRTM4-204ENST00000409884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
LRRTM4-204ENST00000409884 MAGI3Q5TCQ9 1506 aa16.11■□□□□ 0.17
LRRTM4-204ENST00000409884 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
LRRTM4-204ENST00000409884 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
LRRTM4-204ENST00000409884 HECW1Q76N89 1606 aa16.1■□□□□ 0.17
LRRTM4-204ENST00000409884 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
LRRTM4-204ENST00000409884 ITGAEP38570 1179 aa16.09■□□□□ 0.17
LRRTM4-204ENST00000409884 RAPGEF6Q8TEU7 1601 aa16.07■□□□□ 0.16
LRRTM4-204ENST00000409884 RRBP1Q9P2E9 1410 aaKnown RBP16.06■□□□□ 0.16
LRRTM4-204ENST00000409884 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
LRRTM4-204ENST00000409884 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
LRRTM4-204ENST00000409884 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
LRRTM4-204ENST00000409884 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
LRRTM4-204ENST00000409884 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
LRRTM4-204ENST00000409884 PTPRGP23470 1445 aa16.03■□□□□ 0.16
LRRTM4-204ENST00000409884 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
LRRTM4-204ENST00000409884 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
LRRTM4-204ENST00000409884 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
LRRTM4-204ENST00000409884 ABCA8O94911 1581 aa15.99■□□□□ 0.15
LRRTM4-204ENST00000409884 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
LRRTM4-204ENST00000409884 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
LRRTM4-204ENST00000409884 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
LRRTM4-204ENST00000409884 ATP10BO94823 1461 aa15.94■□□□□ 0.14
LRRTM4-204ENST00000409884 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
LRRTM4-204ENST00000409884 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
LRRTM4-204ENST00000409884 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
LRRTM4-204ENST00000409884 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
LRRTM4-204ENST00000409884 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
LRRTM4-204ENST00000409884 CDK11AQ9UQ88 783 aaPredicted RBP15.9■□□□□ 0.14
LRRTM4-204ENST00000409884 KIF14Q15058 1648 aa15.89■□□□□ 0.13
LRRTM4-204ENST00000409884 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
LRRTM4-204ENST00000409884 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
LRRTM4-204ENST00000409884 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
LRRTM4-204ENST00000409884 PTPRKQ15262 1439 aa15.86■□□□□ 0.13
LRRTM4-204ENST00000409884 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
LRRTM4-204ENST00000409884 ABCC2Q92887 1545 aa15.84■□□□□ 0.13
LRRTM4-204ENST00000409884 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
LRRTM4-204ENST00000409884 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
LRRTM4-204ENST00000409884 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
LRRTM4-204ENST00000409884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
LRRTM4-204ENST00000409884 KCNH8Q96L42 1107 aa15.79■□□□□ 0.12
LRRTM4-204ENST00000409884 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
LRRTM4-204ENST00000409884 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
LRRTM4-204ENST00000409884 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
LRRTM4-204ENST00000409884 ADCY10Q96PN6 1610 aa15.78■□□□□ 0.12
LRRTM4-204ENST00000409884 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
LRRTM4-204ENST00000409884 TCOF1Q13428 1488 aaKnown RBP15.77■□□□□ 0.11
LRRTM4-204ENST00000409884 ZCCHC11Q5TAX3 1644 aaKnown RBP15.76■□□□□ 0.11
LRRTM4-204ENST00000409884 ABCC10Q5T3U5 1492 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms